mRNA_P-wetherbeei_contig19378.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19378.1.1
Unique NamemRNA_P-wetherbeei_contig19378.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A6L5FDQ3_9HYPH (UbiD family decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDQ3_9HYPH)

HSP 1 Score: 506 bits (1304), Expect = 6.230e-175
Identity = 257/376 (68.35%), Postives = 304/376 (80.85%), Query Frame = 1
Query:   31 DTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            D DQFRLRRFI+ L   +EL++R D   LAD+A A +GN +AV F   GP+ QEL G VC SRSRLA AFGV  D L +EV +R R+ PEV+E+ RA+AP QQVVL G DADLT LPVHLQHG DG P+IS+S DF ID +TG+TNVG+RRLMLRG RE G+DL+APSDL+A++EA++A G+ LPV+FVVG HPIDH+A  +R PVDELGL++ LR AP+  VKCVT+DIRVPADAE+VLEGY DA+G+ E EGPYGEFLGYYGAVKRNPVF LTAIT R DALFQTSTI G SL  TDTA L ++R+E+++  AL++AVREP+ VYVT SSGGSFNVR  +RQRVPGEARNAI ACF  LAN KNVFVVDPDIDI
Sbjct:   17 DFDQFRLRRFIDSLP-AEELEVRRDPTDLADVAQAFEGNAKAVRFHAVGPERQELVGNVCGSRSRLALAFGVAPDALRAEVQRRLRSKPEVLEVSRAEAPVQQVVLTGDDADLTTLPVHLQHGADGAPFISASTDFVIDPKTGWTNVGMRRLMLRGRRETGIDLVAPSDLKAIYEATAATGQPLPVSFVVGMHPIDHIAAVMRLPVDELGLLAVLRDAPLPVVKCVTNDIRVPADAEWVLEGYLDARGHVEAEGPYGEFLGYYGAVKRNPVFHLTAITRRRDALFQTSTIGGRSLGRTDTAQLGSLRSEILIMRALEIAVREPVAVYVTTSSGGSFNVRIALRQRVPGEARNAITACFGALANCKNVFVVDPDIDI 391          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A127EXS5_9HYPH (UbiD family decarboxylase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EXS5_9HYPH)

HSP 1 Score: 500 bits (1288), Expect = 1.360e-172
Identity = 250/376 (66.49%), Postives = 301/376 (80.05%), Query Frame = 1
Query:   31 DTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            D D+FRLRRFIE L   D+L  R++   LA +A  ++GN +AV F+ AGP+  EL G V   R+RLA AFGV+   L +E+ +R  N PE+ E+ RA+APCQQVVL G DAD+TKLPVHLQHG DGGPYIS+S+D+ +D +TGFTNVG+RRLMLR   E GVDL++PSDL+A++EA++AAGK  PV+FVVG HPIDHVAGT+R PVDE+G+++ LR AP+A VK VT+DIRVPADAEYV+EGY D +G+ E EGPYGEFLGYYGAVKRNPVF +TAITHR DALFQTSTI G +L  TDTA L+A+RTEV +W ALQ AVREP+ VY T SSGG+FNVR  IRQRVPGEARNAI AC   LAN KNVFVVDPD+DI
Sbjct:   17 DFDRFRLRRFIEGL-GADQLDTRSEPHDLASLAEVMEGNQKAVLFRAAGPEKAELVGNVSGDRARLASAFGVKPAGLLAEIQRRLGNKPEIFEVTRAEAPCQQVVLTGDDADVTKLPVHLQHGADGGPYISASIDYVLDPKTGFTNVGLRRLMLRSRHETGVDLVSPSDLKAIYEANAAAGKRTPVSFVVGAHPIDHVAGTMRLPVDEIGIVAMLRDAPLAVVKSVTNDIRVPADAEYVIEGYLDERGHVEAEGPYGEFLGYYGAVKRNPVFHVTAITHRKDALFQTSTIGGKTLGRTDTAQLSALRTEVAIWTALQAAVREPVAVYATTSSGGAFNVRVAIRQRVPGEARNAIGACMGALANCKNVFVVDPDVDI 391          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A8J3QS69_9ACTN (Uncharacterized protein n=1 Tax=Rugosimonospora africana TaxID=556532 RepID=A0A8J3QS69_9ACTN)

HSP 1 Score: 499 bits (1285), Expect = 4.910e-172
Identity = 251/377 (66.58%), Postives = 299/377 (79.31%), Query Frame = 1
Query:   28 LDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            LD D+FRLR FIE L  TDELQ+  + + LAD+A   +GNP+AV  ++ GP+  EL G    SR+RLA AFGV    L  +VL+R RNTPE+VE+ R +AP QQ VL G D D+T LPVHLQHG DG PYIS+S+D+ +D ++G+TNVG+RRLMLRG +E GVDL++PSDLRA+++AS A GK LPVAFVVG HPID VA T+R PV+ELGL+++LR AP+  VKCVT+DIRVPADAE+VLEGY D  GY E EGPYGEFLGYYG VKRNPVF LTAITHR DALFQT+TISG S+  TD+A L A+RTEV+VW AL+ AVREPL +  TASSGG FNVR  +RQRVPGEARNAI A F CLANVKNVFVVDPDID+
Sbjct:   15 LDLDRFRLRAFIEGLIGTDELQVLDERIDLADVAEVFEGNPKAVLLRQVGPEGAELVGGAAGSRARLARAFGVTPGGLLPDVLRRLRNTPEIVEVSRDEAPVQQTVLTGDDVDVTALPVHLQHGMDGAPYISASVDYVVDPKSGWTNVGMRRLMLRGRQETGVDLVSPSDLRAIYQASVAEGKPLPVAFVVGSHPIDQVAATMRLPVNELGLVAALRDAPLPVVKCVTNDIRVPADAEFVLEGYLDENGYAESEGPYGEFLGYYGEVKRNPVFHLTAITHRRDALFQTATISGRSMEYTDSAALCALRTEVMVWRALETAVREPLAICATASSGGMFNVRIALRQRVPGEARNAIMAAFGCLANVKNVFVVDPDIDV 391          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A6N7H187_9HYPH (UbiD family decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H187_9HYPH)

HSP 1 Score: 498 bits (1282), Expect = 9.980e-172
Identity = 254/376 (67.55%), Postives = 298/376 (79.26%), Query Frame = 1
Query:   31 DTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            D D+FRLRRF+E L   +EL++R  +  LAD+A AL+GNPRAV F+ AG + Q+L G V  SRSR+A A GV  ++L  E+ +R RN  E+VE+ RA+AP QQVVL G  ADLT LPVHLQHG DG PYISSS DF +D +TGFTNVGIRRLMLRG  EAG+DL +PSDLRA++EAS+AAGK +PVAFVVG HPIDH+A  +R P D+L LISSLR AP+  VKCVTSD+RVPADAE+VLEG  D +G+ E EGPYGEFLGYYGAVKRNPVF LTAIT R DALFQTSTI G S++ TDTA LN +RTE +VW AL+ AVREP+GVY T SSGG + +R  IRQRVPGEARNAI ACF  L NVK+VFVVDPDIDI
Sbjct:   15 DLDRFRLRRFVEELP-PEELEVRGGSTELADVAQALEGNPRAVMFEAAGLERQQLVGGVAGSRSRIARALGVAPNELLHEIQRRLRNKAEIVEVSRAEAPAQQVVLTGAGADLTALPVHLQHGADGAPYISSSTDFVVDPKTGFTNVGIRRLMLRGRTEAGIDLNSPSDLRAIYEASAAAGKPVPVAFVVGSHPIDHLAAVMRLPSDDLALISSLRGAPLPVVKCVTSDVRVPADAEWVLEGMIDERGHVEPEGPYGEFLGYYGAVKRNPVFHLTAITRRRDALFQTSTIGGRSISRTDTAQLNGVRTEAMVWRALETAVREPVGVYATTSSGGMYTLRVAIRQRVPGEARNAIAACFGALTNVKHVFVVDPDIDI 389          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A1Q7B888_9PROT (Carboxylyase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7B888_9PROT)

HSP 1 Score: 494 bits (1273), Expect = 2.640e-170
Identity = 254/382 (66.49%), Postives = 308/382 (80.63%), Query Frame = 1
Query:   13 AQAKPLDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            A+A   + ++FRLRRF+E L   ++L+    A  LAD+AA L+GNP+AV F+  GP+ QEL G V ASR+R+A AFG E   L  E+L+R  N P++VEI RA+AP Q+VVL    ADLT LPVHL HG DGGPYISSS+DF +D +TG+TNVG+RRLMLRG REAGVDL++PSDLRA++EAS+AAG+ LPV+FVVG HPID +A  +R PVDELGL++SLR AP+  VKCV++DIRVPADAE+VLEGY DA+G+ E EGPYGEFLGYYGA+KRNPVF LTAIT R DALFQTSTI G SLA TDTA LNA+RTEV++W AL+ AVREP+ V+ TA+SGG FN+R  +RQRVPGEARNAI ACF  L NVK+VFVVDPDIDI
Sbjct:   14 AKAPVAEFERFRLRRFVEGLG--EDLETVHAATDLADVAAKLEGNPKAVLFRAVGPERQELVGNVTASRARIARAFGGEPAALLPELLRRLSNKPDIVEIARAEAPVQEVVLTDAAADLTALPVHLGHGADGGPYISSSIDFVVDPKTGWTNVGMRRLMLRGRREAGVDLVSPSDLRAIYEASAAAGRPLPVSFVVGAHPIDQLAAVMRLPVDELGLVASLRGAPLPVVKCVSNDIRVPADAEWVLEGYLDARGHIEPEGPYGEFLGYYGALKRNPVFHLTAITRRRDALFQTSTIGGWSLARTDTAQLNALRTEVMIWRALESAVREPIAVHATAASGGMFNLRVALRQRVPGEARNAIAACFGALVNVKHVFVVDPDIDI 393          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: UPI0018DF6DFF (UbiD family decarboxylase n=1 Tax=Roseomonas sp. KE2513 TaxID=2479202 RepID=UPI0018DF6DFF)

HSP 1 Score: 486 bits (1250), Expect = 7.850e-167
Identity = 245/380 (64.47%), Postives = 295/380 (77.63%), Query Frame = 1
Query:   19 AKPLDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            A  LD D++RLRRF+ERL    ELQ+    + LAD+   L+GNPRA+  ++ GP++  LAG VCASR+RLAHAF V    L  EV++R R +P  + + R  AP QQVVL G +ADLT LPVHLQHG DG PYIS+S+D++ D+  G+ NVGIRRLMLRG REAG+DL++PSDLR+++E  +  G  LP+AFVVGCHPIDHV  T+R PVDELG+++SLR AP+  VKCVT+D+ VPADAEYVLEGY D +G+ E EGPYGEFLGYYG VKRNPVF LTAITHR DA+FQT TI G S+  TDTA L A+RTEV+VW AL+ AVREP+GV+ T SSGG FN+R  IRQRVPGEARNAI A F  LANVKNVFVVDPDIDI
Sbjct:   13 AASLDLDRYRLRRFLERLEAAGELQVEERPLDLADLPELLEGNPRALLARRVGPESAVLAGNVCASRTRLAHAFEVAPRDLLKEVMRRLRTSPGTLRLSRESAPVQQVVLTGEEADLTTLPVHLQHGRDGAPYISASIDYAADESRGWMNVGIRRLMLRGRREAGIDLVSPSDLRSIYETEAGKGCPLPIAFVVGCHPIDHVGATMRLPVDELGIVASLRDAPLPVVKCVTNDLLVPADAEYVLEGYLDERGHVEAEGPYGEFLGYYGGVKRNPVFHLTAITHRRDAVFQTCTIGGRSMGRTDTAQLCALRTEVMVWRALEGAVREPVGVHATGSSGGMFNLRIAIRQRVPGEARNAIMAAFGSLANVKNVFVVDPDIDI 392          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: UPI00131D10FE (UbiD family decarboxylase n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131D10FE)

HSP 1 Score: 484 bits (1246), Expect = 3.620e-166
Identity = 247/388 (63.66%), Postives = 299/388 (77.06%), Query Frame = 1
Query:    7 MNAQAKP----LDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            +N   KP    +D D FRLR F++ L  TDEL+I  + V LAD+A  L+GNPRAV F+K GP+  EL G V  SR RLA A GV  D++ SE+L+R R+ P++VEI R  AP Q+VVL G DADLT+LPV+ QHG DG PYIS+++D+  D +TG  NVG+RRLMLRGP EAG D+++PSDLRA++EAS A G+ LPV+FVVG HP+D++A TLR PVDELG+++SLR  P+  VK VT+DI VPADAE+VLEGY   KGY E EGPYGEFLGYYG VKRNPVF LTAIT R DA+FQT TISG ++  TD+A L A+RTE +VW AL+ AVREPLGVY T +SGG FNVR  +RQRVPGEARNAI A FS LANVKNVFVVDPD+DI
Sbjct:    3 VNTGGKPDGQAIDCDAFRLRTFLQTLEGTDELEIVEEQVDLADVADRLEGNPRAVLFRKVGPEGAELVGNVVGSRERLARALGVSQDKMLSELLERLRHKPQIVEIAREAAPVQEVVLTGEDADLTQLPVNFQHGLDGAPYISAAIDYVRDVKTGLMNVGVRRLMLRGPHEAGADVVSPSDLRAIYEASLARGERLPVSFVVGAHPLDYIAATLRLPVDELGIVASLRNGPLPVVKGVTNDIMVPADAEFVLEGYLSEKGYVEAEGPYGEFLGYYGGVKRNPVFHLTAITKRRDAMFQTMTISGRTMGYTDSAPLIALRTEAMVWRALEGAVREPLGVYATGASGGMFNVRISLRQRVPGEARNAIAAAFSSLANVKNVFVVDPDVDI 390          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A537BUR2_9PROT (UbiD family decarboxylase n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BUR2_9PROT)

HSP 1 Score: 481 bits (1237), Expect = 1.020e-164
Identity = 243/382 (63.61%), Postives = 297/382 (77.75%), Query Frame = 1
Query:   13 AQAKPLDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            A+   +D ++FRLRRF+E L  + EL++R  A  LAD+A AL+ N +AV F++ G +  +L G V  SR+RLA AFG   DQL +EVL+R R TP+VVE+PR  AP Q +VL G  ADLT LPV+LQHG DGGPYIS+S+DF +D   G+TNVG+RRLMLRG REAGVDL +PSDLRA++E++   G+ LPVAFVVG HP D+VA  +R P DELGL++SLR AP+A VKCV+ +IRVPADAE+VLEGY D +G+ E EGPYGEFLGYYG VK+NPVF LTA+T R DALFQT+TI G SLA TDTA LNA+RTEV+VW AL+ AVRE   VY T +SGG +N+R  +R RVPGEARNAI A F CLANVK+VFVVDPDIDI
Sbjct:   20 ARETGIDLERFRLRRFVEELRQSGELEVRDGAADLADVAPALESNAKAVLFERLGKEGAQLVGNVMGSRARLARAFGAAPDQLLAEVLRRLRATPQVVEVPRESAPAQDIVLTGDKADLTALPVNLQHGMDGGPYISASIDFVLDPSNGWTNVGVRRLMLRGRREAGVDLNSPSDLRALYESAVKQGRKLPVAFVVGAHPADYVAAVMRLPADELGLVASLRGAPLAVVKCVSCEIRVPADAEWVLEGYLDERGHVEAEGPYGEFLGYYGGVKQNPVFHLTAVTRRRDALFQTATIGGRSLARTDTAQLNALRTEVMVWRALETAVRETKAVYATPASGGMYNLRIALRPRVPGEARNAIAAAFGCLANVKHVFVVDPDIDI 401          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A1F3ZS95_9PROT (Carboxylyase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F3ZS95_9PROT)

HSP 1 Score: 469 bits (1208), Expect = 1.650e-160
Identity = 241/386 (62.44%), Postives = 295/386 (76.42%), Query Frame = 1
Query:    1 AEMNAQAKPLDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            A++   A  +D ++FRLRR+I+ L   +EL+ R   + LAD+A  LDGN RAV F+KAGP+   LAG VCASRSRLA AF     ++  EV +R     E+VE+PR QAP Q VVLEG  ADLT LPVHLQHG DG PYIS+S+D+++D+  G TN+G+RRLMLRG RE GVDLIAPSDLRA++E+    G+ +PVAFVVG HPID VA T+R P+DEL L++SLR AP+  VKCV++DIRVPADAE+VLEG+FD+KGY E EGPYGEFLGYYG +K+NPVFRLTAIT R DALFQT+TI    L  TDT+ LNA+R+EV +W AL+ AVRE   VY T  SGG+FNVR  +RQRVPGEARNAI A F CL NVK+VFVVD D+D+
Sbjct:    3 AKVARAAAQVDFERFRLRRYIDSLP-PEELERRTSPIDLADLAEVLDGNTRAVLFEKAGPEGSPLAGNVCASRSRLAIAFDSTPGEVTQEVRRRLAVRQEIVEVPRGQAPVQSVVLEGDSADLTALPVHLQHGLDGAPYISASIDYTVDRDRGLTNIGMRRLMLRGRRETGVDLIAPSDLRAIYESQMKRGERVPVAFVVGAHPIDCVAATMRIPMDELSLLASLRGAPLPVVKCVSNDIRVPADAEWVLEGFFDSKGYVEAEGPYGEFLGYYGVLKKNPVFRLTAITRRKDALFQTATIGSRMLGRTDTSQLNALRSEVTLWRALETAVREVKAVYATPHSGGAFNVRIAMRQRVPGEARNAIAAAFGCLVNVKHVFVVDADVDV 387          
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Match: A0A1F2UN21_9BACT (Carboxylyase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22 TaxID=1797188 RepID=A0A1F2UN21_9BACT)

HSP 1 Score: 469 bits (1206), Expect = 2.890e-160
Identity = 239/376 (63.56%), Postives = 293/376 (77.93%), Query Frame = 1
Query:   31 DTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRAVHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVVEIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRTGFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGCHPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEGYFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISGASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKIRQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI 1158
            D ++FRLR F++ LA   EL+  ADA+ LAD+   L+GNP+AV F+  G + Q LAG V  SR R+AHAFGV    L +EV +R RN PE+VE+ R +AP Q VVL G +ADLT LPVHLQHG D  PYIS+++DF+ID+ TG+TNVG+RRLMLRG RE G+DL+APSDLR +F AS A  + LP++ VVG HP+D++A TLR PVDELGLISSLR AP+  VK +T+DIRVPADAE+V+EG  DAKGYTE EGPYGEFLGYYG VK NPVFR+TAIT R DA+FQT TISG S++ TDTA L+ +RTEV+VW AL  A+REP+ V  + ++GG +NVR  +RQRVPGEARNAI A F  +ANVKNVFVVDPDIDI
Sbjct:    5 DYNRFRLRTFLDALAQRGELETHADAIKLADVGRVLEGNPKAVLFESIGAERQALAGNVLGSRPRMAHAFGVAPHALLAEVRRRLRNQPEIVEVARGEAPVQHVVLTGAEADLTALPVHLQHGYDAAPYISAAMDFAIDKATGWTNVGLRRLMLRGRRETGIDLVAPSDLRTIFLASLARREPLPLSIVVGGHPVDYLAATLRLPVDELGLISSLRGAPLPVVKGITNDIRVPADAEWVIEGSLDAKGYTEPEGPYGEFLGYYGGVKINPVFRVTAITRRRDAVFQTLTISGRSMSRTDTAQLSGLRTEVLVWRALDTAIREPVAVCASTATGGVYNVRVAMRQRVPGEARNAIAAVFGSVANVKNVFVVDPDIDI 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19378.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FDQ3_9HYPH6.230e-17568.35UbiD family decarboxylase n=1 Tax=Hyphomicrobiales... [more]
A0A127EXS5_9HYPH1.360e-17266.49UbiD family decarboxylase n=1 Tax=Rhodoplanes sp. ... [more]
A0A8J3QS69_9ACTN4.910e-17266.58Uncharacterized protein n=1 Tax=Rugosimonospora af... [more]
A0A6N7H187_9HYPH9.980e-17267.55UbiD family decarboxylase n=1 Tax=Hyphomicrobiales... [more]
A0A1Q7B888_9PROT2.640e-17066.49Carboxylyase n=1 Tax=Alphaproteobacteria bacterium... [more]
UPI0018DF6DFF7.850e-16764.47UbiD family decarboxylase n=1 Tax=Roseomonas sp. K... [more]
UPI00131D10FE3.620e-16663.66UbiD family decarboxylase n=1 Tax=Caulobacter sp. ... [more]
A0A537BUR2_9PROT1.020e-16463.61UbiD family decarboxylase n=5 Tax=Betaproteobacter... [more]
A0A1F3ZS95_9PROT1.650e-16062.44Carboxylyase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A1F2UN21_9BACT2.890e-16063.56Carboxylyase n=1 Tax=Acidobacteria bacterium RIFCS... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19378contigP-wetherbeei_contig19378:4..1161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123501.KB902290_gene1572
PFAMsUbiD
Model size1158
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00391,RC03086
KEGG koko:K03182,ko:K16874
KEGG ReactionR04985,R04986,R10213
KEGG Pathwayko00130,ko00365,ko01100,ko01110,ko01120,map00130,map00365,map01100,map01110,map01120
KEGG ModuleM00117
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.54e-156
EggNOG OGsCOG0043@1|root,COG0043@2|Bacteria,1MU62@1224|Proteobacteria,2TTSQ@28211|Alphaproteobacteria
EC4.1.1.98
DescriptionBelongs to the UbiD family
Cds size1152
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.6031709-CDS-P-wetherbeei_contig19378:3..11551683186170.6031709-CDS-P-wetherbeei_contig19378:3..1155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19378 4..1155 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.6138794-UTR-P-wetherbeei_contig19378:1155..11611683186170.6138794-UTR-P-wetherbeei_contig19378:1155..1161Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19378 1156..1161 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19378.1.1prot_P-wetherbeei_contig19378.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19378 4..1155 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19378.1.1

>prot_P-wetherbeei_contig19378.1.1 ID=prot_P-wetherbeei_contig19378.1.1|Name=mRNA_P-wetherbeei_contig19378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=384bp
MNAQAKPLDTDQFRLRRFIERLANTDELQIRADAVALADIAAALDGNPRA
VHFKKAGPDNQELAGAVCASRSRLAHAFGVEVDQLASEVLKRSRNTPEVV
EIPRAQAPCQQVVLEGRDADLTKLPVHLQHGCDGGPYISSSLDFSIDQRT
GFTNVGIRRLMLRGPREAGVDLIAPSDLRAMFEASSAAGKHLPVAFVVGC
HPIDHVAGTLRFPVDELGLISSLRAAPVATVKCVTSDIRVPADAEYVLEG
YFDAKGYTELEGPYGEFLGYYGAVKRNPVFRLTAITHRSDALFQTSTISG
ASLAMTDTAVLNAIRTEVIVWGALQLAVREPLGVYVTASSGGSFNVRAKI
RQRVPGEARNAIHACFSCLANVKNVFVVDPDIDI
back to top

mRNA from alignment at P-wetherbeei_contig19378:4..1161-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19378.1.1 ID=mRNA_P-wetherbeei_contig19378.1.1|Name=mRNA_P-wetherbeei_contig19378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1158bp|location=Sequence derived from alignment at P-wetherbeei_contig19378:4..1161- (Phaeothamnion wetherbeei SAG_119_79)
GCCGAAATGAACGCCCAGGCCAAGCCGTTGGATACCGATCAGTTCCGCCT GCGCCGCTTCATCGAGCGCCTCGCCAACACCGACGAGTTGCAGATTCGCG CCGATGCCGTCGCACTTGCCGACATCGCGGCCGCCCTGGACGGCAATCCT CGCGCGGTCCATTTCAAGAAGGCGGGTCCCGACAACCAGGAACTGGCCGG TGCGGTGTGTGCCAGCCGCAGCCGTCTCGCCCACGCCTTCGGCGTCGAGG TCGACCAGCTTGCCAGCGAGGTCTTGAAACGATCCCGCAACACGCCCGAG GTCGTCGAAATCCCTCGTGCGCAAGCGCCGTGCCAGCAAGTGGTGCTGGA GGGCCGCGACGCCGACCTGACAAAATTGCCCGTTCACCTCCAGCACGGCT GCGACGGCGGACCCTATATCTCCTCGTCGCTCGATTTCTCGATCGATCAA CGTACGGGCTTCACGAACGTCGGCATCCGCCGCTTGATGCTGCGCGGCCC CCGGGAAGCCGGGGTCGATCTGATCGCACCTTCCGATCTGCGCGCAATGT TCGAGGCGAGTTCAGCGGCCGGCAAGCACCTCCCCGTCGCCTTCGTCGTC GGTTGCCATCCGATCGACCATGTCGCGGGAACGCTGCGTTTCCCGGTGGA TGAACTCGGCCTCATCTCGTCGCTTCGCGCCGCTCCAGTCGCCACCGTCA AATGCGTGACGAGCGACATTCGCGTTCCCGCCGATGCCGAATATGTTCTG GAAGGCTACTTCGACGCCAAGGGATACACCGAGTTGGAAGGGCCTTACGG GGAGTTCCTCGGTTACTACGGCGCGGTCAAACGCAACCCCGTATTCCGCC TGACCGCGATCACCCACCGCAGCGATGCGCTGTTCCAGACGAGCACGATC AGCGGTGCGTCGCTCGCGATGACTGACACGGCCGTGCTGAACGCCATCCG CACCGAAGTCATCGTCTGGGGCGCTCTGCAGTTGGCCGTCCGCGAGCCCC TCGGCGTCTACGTCACCGCGTCGTCGGGCGGTAGTTTCAACGTACGCGCC AAGATCCGCCAGCGCGTGCCCGGCGAGGCGCGCAACGCGATCCACGCCTG CTTCTCCTGCCTCGCCAACGTCAAGAACGTGTTTGTCGTCGATCCCGACA TCGACATC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19378:4..1161-

>mRNA_P-wetherbeei_contig19378.1.1 ID=mRNA_P-wetherbeei_contig19378.1.1|Name=mRNA_P-wetherbeei_contig19378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig19378:4..1161- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGCCCAGGCCAAGCCGTTGGATACCGATCAGTTCCGCCTGCGCCG
CTTCATCGAGCGCCTCGCCAACACCGACGAGTTGCAGATTCGCGCCGATG
CCGTCGCACTTGCCGACATCGCGGCCGCCCTGGACGGCAATCCTCGCGCG
GTCCATTTCAAGAAGGCGGGTCCCGACAACCAGGAACTGGCCGGTGCGGT
GTGTGCCAGCCGCAGCCGTCTCGCCCACGCCTTCGGCGTCGAGGTCGACC
AGCTTGCCAGCGAGGTCTTGAAACGATCCCGCAACACGCCCGAGGTCGTC
GAAATCCCTCGTGCGCAAGCGCCGTGCCAGCAAGTGGTGCTGGAGGGCCG
CGACGCCGACCTGACAAAATTGCCCGTTCACCTCCAGCACGGCTGCGACG
GCGGACCCTATATCTCCTCGTCGCTCGATTTCTCGATCGATCAACGTACG
GGCTTCACGAACGTCGGCATCCGCCGCTTGATGCTGCGCGGCCCCCGGGA
AGCCGGGGTCGATCTGATCGCACCTTCCGATCTGCGCGCAATGTTCGAGG
CGAGTTCAGCGGCCGGCAAGCACCTCCCCGTCGCCTTCGTCGTCGGTTGC
CATCCGATCGACCATGTCGCGGGAACGCTGCGTTTCCCGGTGGATGAACT
CGGCCTCATCTCGTCGCTTCGCGCCGCTCCAGTCGCCACCGTCAAATGCG
TGACGAGCGACATTCGCGTTCCCGCCGATGCCGAATATGTTCTGGAAGGC
TACTTCGACGCCAAGGGATACACCGAGTTGGAAGGGCCTTACGGGGAGTT
CCTCGGTTACTACGGCGCGGTCAAACGCAACCCCGTATTCCGCCTGACCG
CGATCACCCACCGCAGCGATGCGCTGTTCCAGACGAGCACGATCAGCGGT
GCGTCGCTCGCGATGACTGACACGGCCGTGCTGAACGCCATCCGCACCGA
AGTCATCGTCTGGGGCGCTCTGCAGTTGGCCGTCCGCGAGCCCCTCGGCG
TCTACGTCACCGCGTCGTCGGGCGGTAGTTTCAACGTACGCGCCAAGATC
CGCCAGCGCGTGCCCGGCGAGGCGCGCAACGCGATCCACGCCTGCTTCTC
CTGCCTCGCCAACGTCAAGAACGTGTTTGTCGTCGATCCCGACATCGACA
TC
back to top