mRNA_P-wetherbeei_contig19327.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19327.1.1
Unique NamemRNA_P-wetherbeei_contig19327.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A7W8EA96_9BACT (Putative membrane protein n=1 Tax=Granulicella mallensis TaxID=940614 RepID=A0A7W8EA96_9BACT)

HSP 1 Score: 405 bits (1040), Expect = 8.150e-136
Identity = 219/412 (53.16%), Postives = 290/412 (70.39%), Query Frame = 1
Query:   19 LSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAIPRG---LRRDDAVQVDQDTTGGA-YICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQARTR 1242
            +SLAAV LF IT ++D L +  V+ +P W   GGIDD RA+L A++G VSTVLALIFSVALLVLSMVA LFGPRLLYRF+QD VTQ  IGLFM  F+Y+ L FLV  Q+    FIPQ++++TSW LVL +F  LV+YSHR+A  IQNPD I RIVDD   A+E      +    L   DA +     +  A  +   SGYLQ IHHQ LV  A KAGA++++ +RPGQFVLQGETLA++ PAS L  L  +I+ S+ +GRHRVL QD EFG+ QIVEIAIRALSPA+NDTFTG+A VD L +AL ++ +A +    W+D  G +R+    +   RL + AFDQIRQA++D PAVLIR+L+TL RL+P+L+  E+++  +  A ++WET     +V +D +D+E+A+++ +TR
Sbjct:    1 MSLAAVALFAITITLDMLAAYHVIHIPDWFTMGGIDDARAILSAMLGCVSTVLALIFSVALLVLSMVANLFGPRLLYRFVQDWVTQACIGLFMGAFIYVFLVFLVTHQDEHTSFIPQVSLITSWFLVLSAFGFLVFYSHRVAVLIQNPDAIGRIVDDLRRAVELAAPYSKSELHLHHLDASETHLTMSDKAPMLSPASGYLQEIHHQTLVNTAAKAGAMISVPFRPGQFVLQGETLAFISPASKLASLTPLISRSITMGRHRVLSQDLEFGVAQIVEIAIRALSPAINDTFTGIASVDLLGEALTILAEAPQRSGHWFDTNGKLRLQVRPLLLPRLVKQAFDQIRQAAADNPAVLIRLLSTLERLAPKLQGVEDRNALVEQAAAVWETANTRPLVTMDREDIEAAWKKTQTR 412          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A098G4M3_9GAMM (Uncharacterized protein n=2 Tax=Legionella fallonii TaxID=96230 RepID=A0A098G4M3_9GAMM)

HSP 1 Score: 278 bits (712), Expect = 4.510e-86
Identity = 162/415 (39.04%), Postives = 239/415 (57.59%), Query Frame = 1
Query:   37 GLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAIPRGLRRDDAVQVDQDT-----------TGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQARTRLI 1248
            GLF IT  ID    +G + LP WL  G IDD R +L +++  VSTVL L+FSV LLVLSM A+ FGPRLL RFI D   Q TIGLF ATF++ L   +V + E    FIPQ+T +T+ VL++ SF++L+ +S  I   IQ  ++IAR+  D   ++  +  + R  R  D  +   D             G   +  ++GYLQ+I++  LV+  +     +A    PG F+++G  LA++  A+    L   I  +L +G +R L QD EF   QIVEI IRALS A+NDTFTG+ACVDWL++ ++ + + E  EE W D  G +R++   V+F R+   AFD +R++ +D PA+LIRML    R+ P+L+N E+++  +    +I E          D++D+   Y  A   L+
Sbjct:   37 GLFAITIFIDIQAHKGAIFLPIWLSIGNIDDARVMLSSILSTVSTVLGLVFSVVLLVLSMAASQFGPRLLRRFILDHNGQGTIGLFSATFLFSLSTLVVVRVENGHEFIPQITTLTAIVLMIFSFAALIAFSQSIRKGIQAGNLIARVATDLSGSISSYIEL-RKARIADNTRFSADKGLSIVRQQCIDDGHPILALNAGYLQNINYDKLVDIMSSHDTCIAFKVHPGNFIIKGTVLAFLLSANKDGSLAKKINSTLSIGPNRTLTQDPEFAFAQIVEIGIRALSAAINDTFTGIACVDWLSNDILSLAELEETEEAWRDKMGNIRIIDVSVKFPRMVAAAFDMMRESGADNPAILIRMLQNFTRIGPQLKNNEQRAAIMRQVKAIHELALLQSFTQTDLKDILECYNNACESLL 450          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A7G4RE77_9GAMM (Uncharacterized protein n=1 Tax=Legionella sp. PC997 TaxID=2755562 RepID=A0A7G4RE77_9GAMM)

HSP 1 Score: 273 bits (699), Expect = 3.240e-84
Identity = 157/413 (38.01%), Postives = 240/413 (58.11%), Query Frame = 1
Query:   25 LAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAIPRGLRRDDAVQVDQD----------TTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQA 1233
            L A  LF +T  +D    +G +K P+WL  G +DD R +L A++GAVSTVL L+FSV LLVLSM +T FGPRLL RFI +   Q TIGLF +TF++ L   +V + +    F+P LT +T+ +++++SF++L+ +S  I   IQ  ++IA++ +D    +  + A+ +   ++ A    ++              + +  + GYLQSI++  L++AAT+  A++ L  RPG FV+   TLA + P      L   I  +L +G +R L QD EF + QIVEI IRAL  A+NDTFTG+ACVDWL + + V++      E W D  G  R+++  V FS L   AFD IR++    PA+LIRML    R++P LR+ ++++  +    +I E          DM+D+   Y +A
Sbjct:   27 LLACALFALTIFLDVQSHKGYIKYPSWLSIGDVDDARVMLVAIIGAVSTVLGLVFSVVLLVLSMASTQFGPRLLRRFIIEQNGQGTIGLFSSTFLFSLFTLVVVRYQDGHEFVPHLTTLTAVLMMILSFAALITFSQNIRKEIQTGNLIAKVDEDLTRVITNYVALRKARTKESANIAPEEHPEVLRKRSLNESYSVLASNPGYLQSINYSKLIKAATREDAVIILKVRPGHFVITETTLADIIPNEKGPILIKTIHETLRIGPNRTLPQDPEFAMAQIVEIGIRALGDAINDTFTGIACVDWLTNNISVLVDLPETGESWQDGAGRTRLIEMPVTFSHLVGAAFDMIRESGGKNPAILIRMLQNFTRIAPHLRSDKQRAAIMRQITAIREFVDLHPFTRTDMKDMIEIYDKA 439          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A1A2ZDF9_9MYCO (Uncharacterized protein n=4 Tax=Mycobacterium TaxID=1763 RepID=A0A1A2ZDF9_9MYCO)

HSP 1 Score: 267 bits (682), Expect = 1.220e-81
Identity = 159/415 (38.31%), Postives = 240/415 (57.83%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAI-PRGLRRD------DAVQVDQDTTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAY 1224
            W +P  L + A+GLF +T  +D    QG L+ P+W+  G  D  R +L ++  +V TV+ ++FS+ ++ L++ +T FGPR+L  FI+D  TQ+T+G F+ATFVY ++A +      +  F+P ++I T++ LVLI  + L+++ H IAT IQ P +IA I  D  +A+    A  P   R+       D +    +T+G       SGYLQ I HQ LV  A +A A++ L YRPG F+++G  LA V+PA+A +++ + +  +   G HR L QD  FG+ Q+VEIAIRALSPAVNDTFT + C+DWL D+L  +       +   D  GV+RV+  +V + RL + AF++IRQAS   PAV+IR L TL  +  +  + +     +  A  I      S     D  DV+  Y
Sbjct:   15 WLVPTILVIGALGLFALTARLDGAAYQGRLRPPSWVVSGSADAARQVLTSIAASVITVVGIVFSITIVTLTLASTQFGPRMLRNFIRDRGTQLTLGTFVATFVYCVVALVSIGPGDRGEFVPHISITTAFGLVLIDLAVLIYFIHHIATQIQLPQVIAGIAKDLAHAVAVQSADRPMSTRKAAHGPSLDELLATIETSGSVIRTPKSGYLQFIRHQTLVRVAAQADAVIRLPYRPGHFLVEGRELASVWPATAAEQVADYLARAQATGPHRTLTQDVAFGVDQLVEIAIRALSPAVNDTFTALTCIDWLGDSLCKIAPVWTPTQIHRDNRGVIRVISDQVSYERLVQRAFEKIRQASRAMPAVMIRQLDTLATIMEQTTDPQRAQVLMDQAAMIHRANAESVPEHSDRADVDRRY 429          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A538BAJ3_9ACTN (DUF2254 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BAJ3_9ACTN)

HSP 1 Score: 263 bits (672), Expect = 3.780e-80
Identity = 162/421 (38.48%), Postives = 239/421 (56.77%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAF--LVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHA---IPRGLR---RDDAVQVDQDTTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQART 1239
            W +P    L AVGLF IT+++D+   +G + LP+W++ G  D  R +L A+  AV TV+ L+FS+ ++ L++ +  FGPR+L  FI+D  TQ+T+G F+ATFVY +LA   +   + G   F+P L+I  +  LVL++   L+++ H IA SIQ P++IA I  D   A++   A   +  G      +  +    + +G       +GYLQ + + ALV+ AT+A  ++ L YRPG F+++G TLA V+PASA   +   +  +   G +R L QD  F I Q+VEIAIRALSPAVNDTFT + C+DWL+D L  +           D  G +RV+  +V +SR    AFD+IRQA    PAV+IR L  L ++      +E+++  L  AD IW     S     D  DV   Y   RT
Sbjct:   21 WLVPTVEVLLAVGLFAITYTLDRAAYRGDVSLPSWVNSGSPDAARQILTAIAAAVITVVTLVFSITIVALTLTSQQFGPRMLRNFIRDRGTQLTLGTFVATFVYAVLALGSIGHGRGGD--FVPHLSITVALGLVLVALGVLIYFIHHIAKSIQLPEVIASIARDLSAAIDTELASGTVDTGFEGGPSETELLFRIEESGAPVPAPRTGYLQFVAYDALVDIATQADGVIYLLYRPGHFIVEGFTLATVWPASAATDVTRAMARAHVTGPNRTLTQDLMFAIDQLVEIAIRALSPAVNDTFTALTCIDWLSDGLCKLTARFHPRRVHRDRDGNVRVIAADVSYSRFVERAFDKIRQAGKGMPAVMIRQLDALAKVMAFATASEQRAALLEQADMIWRLCVESVAEPFDRDDVRRRYDVVRT 439          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A1A2Z271_9MYCO (Uncharacterized protein n=2 Tax=unclassified Mycobacterium TaxID=2642494 RepID=A0A1A2Z271_9MYCO)

HSP 1 Score: 263 bits (671), Expect = 5.050e-80
Identity = 156/416 (37.50%), Postives = 234/416 (56.25%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAI-PRGLRRD-------DAVQVDQDTTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAY 1224
            W +P  L + A+GLF++T  +D+   QG  + P+W+  G  D  R LL ++  +V TV+ ++FS+ ++ L++ +T FGPR+L  FI+D  TQ+T+G F+ATFVY ++  +      +  F+P ++I T++ LVLI  + L+++ H IAT IQ P +IA I  D   A+    +  P+   R        D +    +T+G       SGYLQ I HQ LV  AT A A++ L YRPG F+++G  LA V+PA+A  ++ + +  +   G HR L QD  FG+ Q+VEIAIRALSPAVNDTFT + C+DWL D L  +       +   D  G +RV+  +V + RL + AF++IRQAS   PAV+IR L  L  +  +  +       +  A  I      S     D  DV+  Y
Sbjct:   21 WLVPTILIVGALGLFVVTLRLDRAAYQGAFRPPSWVISGSADAARQLLTSIAASVITVVGIVFSITIVTLTLASTQFGPRMLRNFIRDRGTQLTLGTFVATFVYCIVVLVSIGPGDRGEFVPHVSITTAFGLVLIDLAVLIYFIHHIATQIQLPQVIAGIAKDLAQAVAVQSSDQPQSSARKPGRGPSLDELLTRIETSGSVIRTPKSGYLQFIRHQTLVRVATDADAVIRLPYRPGHFLVEGRELASVWPAAAADQVADYLARAQATGPHRTLTQDVAFGVDQLVEIAIRALSPAVNDTFTALTCIDWLGDCLCKIAPVWTPTQIHRDHQGAIRVISDQVSYERLVQRAFEKIRQASRGMPAVMIRQLDALTTIMEQTTDPHRAQVLMDQAAMIHRANAESVPDESDRADVDRRY 436          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: UPI001F28E68B (DUF2254 domain-containing protein n=1 Tax=Mycobacterium sp. SM1 TaxID=2816243 RepID=UPI001F28E68B)

HSP 1 Score: 261 bits (668), Expect = 8.290e-80
Identity = 163/422 (38.63%), Postives = 236/422 (55.92%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAIP---RGLRRDD----AVQVDQDTTGGAYI-CRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQARTR 1242
            W +P    LAA+ LF  T + D+   +G    P W+  G  D  R +L A+  ++ TV+AL FS+ ++ L++ +T FGPR+L  FI+D  +Q+T+G F+ATFVY +L  +         F+P L+I T++ L L+  + L+++ H  AT IQ P +IA I  D   A+E   A      G +RDD    A  +D   + GA I    SGYLQ I H+ LV  A+ A A++ L YRPG F+++G  LA V+P  A   +   +  +   G HR L QD  FGI Q+VEIAIRALSPAVNDTFT + CVDWLAD+L  + +     + + D  GV+RV+  +V + RL + +F++IRQAS   PA++IR L  L  +  +  +A++    +  A  I      S     D  DVE  YR    R
Sbjct:    2 WLVPALEVLAAIALFAGTLTADRAAYRGAFTPPGWVISGSADTARQILIAIAASIITVIALNFSITIVTLTLASTQFGPRMLRNFIRDHGSQLTLGTFVATFVYCILVLVSIGPADHGEFVPHLSITTTFALTLLDLAVLIYFIHHTATQIQLPFVIASIAKDLAQAVEVQSADTPTYAGGQRDDGEELAALLDTIESCGAVIRTPQSGYLQFIRHKTLVRVASAANAVIRLPYRPGHFLVEGRELAAVWPPEAADHVARYLERAQATGPHRTLTQDVAFGIDQLVEIAIRALSPAVNDTFTAMTCVDWLADSLCKIARVWAPAQVYRDRAGVIRVITDQVSYERLVQRSFEKIRQASRGMPALMIRQLDALTTIMEQTTDAQQARVLMDQAVMIQRANLESVPDESDRADVERRYRALAAR 423          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A0J0UVW3_9ACTN (Putative membrane protein n=7 Tax=root TaxID=1 RepID=A0A0J0UVW3_9ACTN)

HSP 1 Score: 262 bits (669), Expect = 1.320e-79
Identity = 159/416 (38.22%), Postives = 244/416 (58.65%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVY--LLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAIPRGLRRD------DAVQVDQDTTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAY 1224
            W  PL +S+ +V LF  +  +D+         P+ L     DD   L+ AL+GAV+T LAL+FS ++L  S+ +T  GPRL+ RF++DP+TQIT+G F+ T ++  L L+ +      QI   P  +++   VL L  F  LV+Y HR+A++IQ P ++A +V D    L +  A  R L R+       AV      +G       +GY++ +  + L+EAA  A A++ L  RPGQF  QG+ LA+V P+SA  R++ V+  ++ +GR+R L QD EF I Q+VEIA+RALSPA+NDT+TG+ CVDWL  A+V V        G   A G +R++ P ++F R+ + AFD IRQ+++   AVLIR+L  ++ ++P +R  E  +     AD + ET +    V+ D++D+E  Y
Sbjct:   28 WVTPLLMSIGSVLLFAFSIWVDRHFDLMSSWFPSALIDDSADDAAILVTALLGAVATALALVFSTSILTFSLASTQLGPRLIRRFMKDPITQITLGAFLGTVIFNVLTLSAIRSSPGSQI---PAFSVVLVEVLSLCCFGLLVFYVHRVASTIQAPAVVAAVVKDLGKVLAEGSATMRVLLREHDPEKVSAVVAQSRESGAPIAAIQTGYVELVDVERLLEAADSAEAVIVLNRRPGQFTQQGQILAWVSPSSAESRVQQVVAQAVEIGRYRTLRQDLEFAIAQVVEIALRALSPAINDTYTGLTCVDWLGAAMVQVGTHPERTGGICSADGTLRLVVPPLKFDRVLKTAFDLIRQSAAHNVAVLIRILDAISAMAPVVR-PEHLAPLRKHADLVMETARVGSFVSGDLEDIEQRY 439          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A1H7TW04_STRJI (Uncharacterized membrane protein n=3 Tax=Streptacidiphilus TaxID=228398 RepID=A0A1H7TW04_STRJI)

HSP 1 Score: 261 bits (667), Expect = 2.350e-79
Identity = 156/425 (36.71%), Postives = 239/425 (56.24%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYALEKHHAI-----------PRGLRRDDAVQVDQDTTGGAYICRH-SGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAYRQART 1239
            W +P+  +LAA GLF IT  +D+    G ++LP+W+  G  D  R +L  +  AV TV+ L+FS+ ++ L++ +T FGPR+L  FI+D  TQ+T+G F+ATF+Y +L  +         F+P L+I T+  L L+  ++L+++ + IA SIQ P ++A I  D   A+E   A+            RGL   + +  D+  T GA I    SGYLQ + H  LV  A  A A++ + YRPG F++QG  LAYV+P  A  ++   +      G +R L QD  FG  Q+VEI +RALS AVNDTFT + C+DWL D L  +    + +    D  G +RV+  +  + RL R +F++IRQAS   PAV+IR L  L+++  + +  E +   +  AD +  T + +     D  DVE +++  RT
Sbjct:   26 WLVPVLEALAAAGLFAITLGVDRAAYNGTVQLPSWVLSGSADGARQVLTTIAAAVITVVGLVFSITIVALTLASTQFGPRMLRNFIRDRGTQLTLGTFVATFLYAVLVLVAISPGPHGDFVPHLSITTTLALTLVDLATLIYFINHIARSIQLPQVVASIAHDLADAIEDQSALGATGTDAPERPERGLSPTELL--DRMRTEGAVITTSASGYLQYLRHDRLVRIARDADAVIHVPYRPGHFLVQGHPLAYVWPPQAAAQVTATLRRGHVTGPYRTLTQDVSFGFDQLVEIGLRALSAAVNDTFTAITCIDWLGDCLCRITTTWQPQHVHRDHHGYVRVIAHQPDYDRLVRRSFEKIRQASVGMPAVMIRQLDALDKVMRQTQAPERRKLLMEQADLVLHTCEATVPEPSDRADVERSHQAVRT 448          
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Match: A0A0U0W7G1_9MYCO (Uncharacterized protein n=2 Tax=Mycobacterium bohemicum TaxID=56425 RepID=A0A0U0W7G1_9MYCO)

HSP 1 Score: 258 bits (660), Expect = 2.200e-78
Identity = 154/416 (37.02%), Postives = 237/416 (56.97%), Query Frame = 1
Query:    1 WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGALMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMATFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATSIQNPDMIARIVDDFDYAL------EKHHAIPRGLRRDDAVQVDQ--DTTGGAYICRHSGYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRLENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVDWLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQASSDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALDMQDVESAY 1224
            W +P  L L A+GLF +T  +D+    G  + P+W+  G  D  R LL ++  +V TV+ ++FS+ ++ L++ +T FGPR+L  FI+D  TQ+T+G F+ATFVY ++  +      +  F+P ++I  ++ LVL+  + LV++ H IAT IQ P +IA I  D   A+      +   A  +  R     ++ +  +T+GG      SGYLQ I H+ L+  AT+A A++ L YRPG F+++G  LA V+P +A +++   +  +   G HR L QD  FG+ Q+VEIAIRALSPAVNDTFT + C+DWL D+L  +       +   D  GV+RV+  +V + RL + AF++IRQA    PAV+IR L  L  +  +  +A+  S  +  A  I      S     D  DV+  Y
Sbjct:   21 WLVPTILILGALGLFGLTLWLDRAAYHGEFQPPSWVISGAADAARQLLTSIAASVITVVGIVFSITIVTLTLASTQFGPRMLRNFIRDRGTQLTLGTFVATFVYCVVVLVSIGPGDRGEFVPHISITATFGLVLVDLAVLVYFIHHIATQIQLPQVIAGIAKDLSQAVAVQSEDQPGFATRKPARGPSLEELLEKIETSGGVIRTPKSGYLQFIRHRTLIRIATEADAVIRLPYRPGHFLVEGRELASVWPPTAAEQVATYLARAQATGPHRTLTQDVAFGVDQLVEIAIRALSPAVNDTFTALTCIDWLGDSLCKIAPVWTPTQVHRDHLGVIRVISDQVSYERLVQRAFEKIRQAGRGMPAVMIRQLDALTTIMEQTTDAQRASVLMQQATMIHRANLESVPDDSDRADVDRRY 436          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19327.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W8EA96_9BACT8.150e-13653.16Putative membrane protein n=1 Tax=Granulicella mal... [more]
A0A098G4M3_9GAMM4.510e-8639.04Uncharacterized protein n=2 Tax=Legionella falloni... [more]
A0A7G4RE77_9GAMM3.240e-8438.01Uncharacterized protein n=1 Tax=Legionella sp. PC9... [more]
A0A1A2ZDF9_9MYCO1.220e-8138.31Uncharacterized protein n=4 Tax=Mycobacterium TaxI... [more]
A0A538BAJ3_9ACTN3.780e-8038.48DUF2254 domain-containing protein n=1 Tax=Actinomy... [more]
A0A1A2Z271_9MYCO5.050e-8037.50Uncharacterized protein n=2 Tax=unclassified Mycob... [more]
UPI001F28E68B8.290e-8038.63DUF2254 domain-containing protein n=1 Tax=Mycobact... [more]
A0A0J0UVW3_9ACTN1.320e-7938.22Putative membrane protein n=7 Tax=root TaxID=1 Rep... [more]
A0A1H7TW04_STRJI2.350e-7936.71Uncharacterized membrane protein n=3 Tax=Streptaci... [more]
A0A0U0W7G1_9MYCO2.200e-7837.02Uncharacterized protein n=2 Tax=Mycobacterium bohe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19327contigP-wetherbeei_contig19327:3..1259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog235985.BBPN01000035_gene821
PFAMsDUF2254
Model size1257
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009405,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0051704
Exons1
Evalue3.86e-80
EggNOG OGsCOG4325@1|root,COG4325@2|Bacteria,2GWFP@201174|Actinobacteria,2NM4U@228398|Streptacidiphilus
DescriptionPredicted membrane protein (DUF2254)
Cds size1257
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186169.88295-CDS-P-wetherbeei_contig19327:2..12591683186169.88295-CDS-P-wetherbeei_contig19327:2..1259Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19327 3..1259 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19327.1.1prot_P-wetherbeei_contig19327.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19327 3..1259 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19327.1.1

>prot_P-wetherbeei_contig19327.1.1 ID=prot_P-wetherbeei_contig19327.1.1|Name=mRNA_P-wetherbeei_contig19327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=419bp
WKIPLFLSLAAVGLFLITFSIDKLDSQGVLKLPAWLHFGGIDDCRALLGA
LMGAVSTVLALIFSVALLVLSMVATLFGPRLLYRFIQDPVTQITIGLFMA
TFVYLLLAFLVEQQEGQILFIPQLTIMTSWVLVLISFSSLVWYSHRIATS
IQNPDMIARIVDDFDYALEKHHAIPRGLRRDDAVQVDQDTTGGAYICRHS
GYLQSIHHQALVEAATKAGALVALCYRPGQFVLQGETLAYVYPASALQRL
ENVITPSLHLGRHRVLEQDSEFGIYQIVEIAIRALSPAVNDTFTGVACVD
WLADALVVVLQAERVEEGWYDAGGVMRVLQPEVRFSRLARVAFDQIRQAS
SDTPAVLIRMLTTLNRLSPRLRNAEEKSTFLAIADSIWETTQGSKMVALD
MQDVESAYRQARTRLISE*
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mRNA from alignment at P-wetherbeei_contig19327:3..1259+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19327.1.1 ID=mRNA_P-wetherbeei_contig19327.1.1|Name=mRNA_P-wetherbeei_contig19327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig19327:3..1259+ (Phaeothamnion wetherbeei SAG_119_79)
TGGAAAATTCCGCTATTTCTCTCTCTGGCCGCCGTGGGTCTATTTCTTAT CACGTTCTCGATCGATAAGCTGGACAGCCAGGGCGTCTTAAAGCTCCCGG CCTGGCTTCACTTTGGCGGAATCGACGATTGTCGAGCTCTCCTGGGCGCC CTGATGGGCGCGGTGAGCACGGTTCTCGCCTTGATATTCTCGGTGGCGCT CCTGGTGCTTTCGATGGTGGCGACCCTGTTTGGGCCCCGGCTCCTGTACC GCTTCATTCAGGACCCCGTCACCCAGATTACCATCGGCCTCTTCATGGCG ACCTTCGTCTATCTGCTGCTCGCATTTCTCGTGGAGCAGCAGGAGGGGCA AATCCTCTTCATTCCCCAGCTCACGATCATGACGAGTTGGGTCCTCGTGC TGATCAGCTTTTCCTCGCTAGTCTGGTATAGCCATCGCATCGCCACTTCG ATCCAGAATCCGGACATGATTGCTCGGATCGTCGACGATTTCGACTACGC TCTCGAGAAACATCACGCTATTCCCCGGGGCCTGCGCCGTGACGATGCAG TTCAGGTAGACCAGGACACAACCGGCGGCGCTTACATCTGCCGGCACAGC GGTTACTTGCAGAGCATTCATCACCAAGCTCTCGTTGAGGCCGCGACAAA GGCTGGTGCTCTTGTCGCTCTCTGCTATCGTCCAGGCCAATTCGTGCTGC AAGGAGAGACTTTGGCCTATGTCTACCCGGCCTCGGCTCTGCAGAGACTC GAAAATGTCATCACCCCCTCGCTTCATCTAGGCCGTCACCGCGTTCTGGA ACAAGATAGCGAGTTCGGGATCTACCAGATTGTCGAGATCGCCATTCGCG CCCTCAGCCCCGCCGTGAACGATACCTTTACAGGCGTGGCCTGCGTAGAC TGGCTCGCGGACGCCCTGGTCGTCGTTCTCCAGGCCGAGAGAGTTGAGGA GGGCTGGTATGACGCCGGCGGAGTCATGCGCGTGCTACAGCCGGAGGTCC GATTTTCTCGCCTGGCTCGCGTCGCTTTCGATCAGATCCGTCAGGCCTCC AGCGATACCCCAGCTGTTTTAATCCGCATGCTTACGACCCTGAACCGATT GTCTCCGCGGCTGCGCAATGCGGAAGAGAAGTCGACGTTCCTCGCTATTG CCGATTCTATATGGGAGACCACGCAGGGATCCAAAATGGTTGCCCTTGAC ATGCAAGACGTCGAATCAGCCTACCGCCAGGCCCGGACGCGCCTCATCTC TGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19327:3..1259+

>mRNA_P-wetherbeei_contig19327.1.1 ID=mRNA_P-wetherbeei_contig19327.1.1|Name=mRNA_P-wetherbeei_contig19327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig19327:3..1259+ (Phaeothamnion wetherbeei SAG_119_79)
TGGAAAATTCCGCTATTTCTCTCTCTGGCCGCCGTGGGTCTATTTCTTAT
CACGTTCTCGATCGATAAGCTGGACAGCCAGGGCGTCTTAAAGCTCCCGG
CCTGGCTTCACTTTGGCGGAATCGACGATTGTCGAGCTCTCCTGGGCGCC
CTGATGGGCGCGGTGAGCACGGTTCTCGCCTTGATATTCTCGGTGGCGCT
CCTGGTGCTTTCGATGGTGGCGACCCTGTTTGGGCCCCGGCTCCTGTACC
GCTTCATTCAGGACCCCGTCACCCAGATTACCATCGGCCTCTTCATGGCG
ACCTTCGTCTATCTGCTGCTCGCATTTCTCGTGGAGCAGCAGGAGGGGCA
AATCCTCTTCATTCCCCAGCTCACGATCATGACGAGTTGGGTCCTCGTGC
TGATCAGCTTTTCCTCGCTAGTCTGGTATAGCCATCGCATCGCCACTTCG
ATCCAGAATCCGGACATGATTGCTCGGATCGTCGACGATTTCGACTACGC
TCTCGAGAAACATCACGCTATTCCCCGGGGCCTGCGCCGTGACGATGCAG
TTCAGGTAGACCAGGACACAACCGGCGGCGCTTACATCTGCCGGCACAGC
GGTTACTTGCAGAGCATTCATCACCAAGCTCTCGTTGAGGCCGCGACAAA
GGCTGGTGCTCTTGTCGCTCTCTGCTATCGTCCAGGCCAATTCGTGCTGC
AAGGAGAGACTTTGGCCTATGTCTACCCGGCCTCGGCTCTGCAGAGACTC
GAAAATGTCATCACCCCCTCGCTTCATCTAGGCCGTCACCGCGTTCTGGA
ACAAGATAGCGAGTTCGGGATCTACCAGATTGTCGAGATCGCCATTCGCG
CCCTCAGCCCCGCCGTGAACGATACCTTTACAGGCGTGGCCTGCGTAGAC
TGGCTCGCGGACGCCCTGGTCGTCGTTCTCCAGGCCGAGAGAGTTGAGGA
GGGCTGGTATGACGCCGGCGGAGTCATGCGCGTGCTACAGCCGGAGGTCC
GATTTTCTCGCCTGGCTCGCGTCGCTTTCGATCAGATCCGTCAGGCCTCC
AGCGATACCCCAGCTGTTTTAATCCGCATGCTTACGACCCTGAACCGATT
GTCTCCGCGGCTGCGCAATGCGGAAGAGAAGTCGACGTTCCTCGCTATTG
CCGATTCTATATGGGAGACCACGCAGGGATCCAAAATGGTTGCCCTTGAC
ATGCAAGACGTCGAATCAGCCTACCGCCAGGCCCGGACGCGCCTCATCTC
TGAGTGA
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