mRNA_P-wetherbeei_contig19320.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: UPI00199468AE (tRNA-dihydrouridine synthase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI00199468AE) HSP 1 Score: 516 bits (1328), Expect = 1.770e-182 Identity = 256/311 (82.32%), Postives = 280/311 (90.03%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLFAH 933
VLRD+LTRVGGIDRCVSEFIRVTGTLLPDRVF RIVPEL+HGGRTPAGVPVRAQLLGSDPVC+AENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVR AVPR MPVSAKMRLGYNDG+RA+ECALAI AGGA+E+VVHARTK DGYRPPAYWE IQ++R+AVAIPVIANGEIW+ +DA+RCR +SGC ALMLGRGIVA+PGLALAI+A+DR + + +GVSW AL PFVADFW IVG ++APH AGRLKQWLNFLRRRYPEAQ AYA+VRTINDPALV +QLF H
Sbjct: 14 VLRDILTRVGGIDRCVSEFIRVTGTLLPDRVFLRIVPELDHGGRTPAGVPVRAQLLGSDPVCMAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRGAVPRNMPVSAKMRLGYNDGSRALECALAIAAGGAEELVVHARTKVDGYRPPAYWESIQELRSAVAIPVIANGEIWNVEDAMRCRTLSGCNALMLGRGIVADPGLALAIKAQDRDATNFSDPIRADSENSGVSWQALQPFVADFWHIVGTYMAPHQRAGRLKQWLNFLRRRYPEAQAAYASVRTINDPALVEQQLFWH 324
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: UPI0010F4B618 (tRNA-dihydrouridine synthase n=1 Tax=Ramlibacter sp. 2FC TaxID=2502188 RepID=UPI0010F4B618) HSP 1 Score: 444 bits (1141), Expect = 3.290e-154 Identity = 225/309 (72.82%), Postives = 253/309 (81.88%), Query Frame = 1
Query: 4 LRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLFA 930
LRD+LTRVGG+DRCVSEFIRVT TLLP R F R+VPEL +GGRT AGVPVRAQLLGSDP C+AENAA+LA LGPAGIDLNFGCPAK VNRHRGGAVLLDEPELIA+IV AVRRAVP MPVSAKMRLG++D RA ECA AI GADE+VVHARTKA GYRPPAYWERI ++RA V +PV+ANGEIWS DALRCREVSGC +LMLGRG+V++PGLALAI A+D G AG++W LLP VADFWR VG H+A H AGRLKQWLN+LRRRYPEAQ+A+ A+R +NDPA V + L A
Sbjct: 9 LRDILTRVGGVDRCVSEFIRVTDTLLPARAFVRVVPELANGGRTRAGVPVRAQLLGSDPACLAENAARLAELGPAGIDLNFGCPAKTVNRHRGGAVLLDEPELIARIVAAVRRAVPPHMPVSAKMRLGFDDDRRAEECAEAIAGAGADELVVHARTKAHGYRPPAYWERIAELRARVRLPVVANGEIWSVADALRCREVSGCDSLMLGRGMVSDPGLALAILAQDGAPGTSE-------GRAGLAWQDLLPLVADFWRQVGLHVAARHRAGRLKQWLNYLRRRYPEAQEAFDALRLVNDPARVQQWLCA 310
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: A0A2N2RP80_9PROT (tRNA-dihydrouridine(16) synthase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-3 TaxID=2013715 RepID=A0A2N2RP80_9PROT) HSP 1 Score: 442 bits (1138), Expect = 9.410e-154 Identity = 225/300 (75.00%), Postives = 250/300 (83.33%), Query Frame = 1
Query: 4 LRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDP 903
LRD+LTRVGGIDRCVSEFIRVT LLP+RVFTRIVPEL GG TPAGVPVR QLLGSDPVC+AENAA+LAALGPAGIDLNFGCPAK VNRHRGGAVLLDEPELIA+IVGAVRRAVP +PVSAKMRLG+ND +RA+ECA AI GA E+VVHART+ADGYRPPAYWERI DIR +V IPV+ANGEIW+ DALRCREVSGC ALMLGRG+VANPGLA AIRA LH A E V+W AL P + D+WR++ H+ P H AGRLKQWLNFLRR +P+AQ A+ AVRT+NDP
Sbjct: 16 LRDILTRVGGIDRCVSEFIRVTDQLLPNRVFTRIVPELLRGGCTPAGVPVRPQLLGSDPVCLAENAARLAALGPAGIDLNFGCPAKTVNRHRGGAVLLDEPELIARIVGAVRRAVPANVPVSAKMRLGFNDASRALECAQAIAGAGAGELVVHARTRADGYRPPAYWERIADIRRSVTIPVVANGEIWTVADALRCREVSGCPALMLGRGMVANPGLARAIRAA------LHG-----APEPAVAWHALAPLLDDYWRLLRGHVEPRHRAGRLKQWLNFLRREFPQAQVAWTAVRTVNDP 304
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: A0A1P8JSM0_9BURK (tRNA-dihydrouridine(16) synthase n=1 Tax=Rhodoferax koreense TaxID=1842727 RepID=A0A1P8JSM0_9BURK) HSP 1 Score: 442 bits (1137), Expect = 1.600e-153 Identity = 226/304 (74.34%), Postives = 252/304 (82.89%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALV 912
VLRD+LTRVGGIDRCVSEFIRVT TLLPDRVFTR++PELEHGGRT AGVPVRAQLLGSDP +AENAA+LA LGPAGIDLNFGCPAK VNRH GGA LLDEPEL+A+IV AVRRAVP MPVSAKMRLG+NDG+RAVECALA+ GA+E+VVHARTKADGYRPPAYWERI++IRAAVA+PV+ANGEIW+ DDALRCR SG LM+GRG+VA+PGLALAIR D PA E V+WP LLP V DFWR+V A + P AGRLKQWLNFLRRRYPEA+ AY A+RT D A +
Sbjct: 26 VLRDILTRVGGIDRCVSEFIRVTNTLLPDRVFTRVIPELEHGGRTFAGVPVRAQLLGSDPGWLAENAARLARLGPAGIDLNFGCPAKVVNRHGGGAALLDEPELVARIVAAVRRAVPAGMPVSAKMRLGFNDGSRAVECALAMAGNGAEELVVHARTKADGYRPPAYWERIREIRAAVAVPVVANGEIWTVDDALRCRAASGSSQLMIGRGMVADPGLALAIRRHDDLGLA-------PA-EPVVAWPGLLPLVRDFWRLVCARLEPKQRAGRLKQWLNFLRRRYPEAEAAYLALRTETDEARI 321
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: A0A7Y0BIL5_9BURK (tRNA-dihydrouridine(16) synthase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0BIL5_9BURK) HSP 1 Score: 440 bits (1132), Expect = 1.140e-152 Identity = 228/316 (72.15%), Postives = 251/316 (79.43%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLFAHADAQF 948
VLRD+LTRVGGIDRCVSEFIR+T LLP+RVFTRIVPEL GGRT AGVPVRAQLLGSD VC+AENAA+LA LGPAGIDLNFGCPAK VNRH GGA LLDEPE IA IV AVRRAVP MPVSAKMRLGYND +RAVECALAI GGADE+VVHARTKA YRPPAYW RI DIRAAV IPV+ANGEIW+ DDA RCRE SGC LMLGRG+V +PGL LAI+A SA+ A AG++WP LLP +A+FWR+V + AGRLKQWLNFLRRR+PEA+ AY +RTINDPAL+ L AQF
Sbjct: 15 VLRDILTRVGGIDRCVSEFIRITDQLLPERVFTRIVPELHTGGRTLAGVPVRAQLLGSDAVCLAENAARLAGLGPAGIDLNFGCPAKIVNRHGGGASLLDEPETIAAIVSAVRRAVPAGMPVSAKMRLGYNDDSRAVECALAIAEGGADELVVHARTKAQAYRPPAYWGRIADIRAAVKIPVVANGEIWTLDDARRCREASGCDMLMLGRGVVTDPGLGLAIKASMHGSAK--------AASAGIAWPELLPLLAEFWRVVCTRLDVRSRAGRLKQWLNFLRRRFPEAETAYQQLRTINDPALIDVWLAGVLQAQF 322
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: UPI0019B10A7C (tRNA-dihydrouridine synthase n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI0019B10A7C) HSP 1 Score: 440 bits (1132), Expect = 2.550e-152 Identity = 221/307 (71.99%), Postives = 252/307 (82.08%), Query Frame = 1
Query: 4 LRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQL 924
LRD+LTR GG+DRCVSEFIRVTGTLLPDRVFTR+VPEL HG RTPAGVPVR QL+GSD VC+AENAAKLAAL PAGIDLNFGCPAK VNRH GGA LLD+P+L+A+IVGAVRRAVP ++PVSAKMRLG ND +RA+ECALAI + GADE+VVHARTK DGYRPPAYWE I IRAAVAIPVIANGEIWS DA RCREVSGC ALM+GRG+V +PGLA AI+A +A L + A G+ W LLP + DFWR+V AHI P AGRLKQWLN+LRRR+P+A+ A+A VRT+N+P V L
Sbjct: 16 LRDILTRTGGVDRCVSEFIRVTGTLLPDRVFTRVVPELNHGSRTPAGVPVRPQLMGSDAVCLAENAAKLAALRPAGIDLNFGCPAKIVNRHGGGAALLDDPDLLARIVGAVRRAVPADVPVSAKMRLGVNDASRAIECALAIESSGADELVVHARTKLDGYRPPAYWEHIAGIRAAVAIPVIANGEIWSVADAQRCREVSGCDALMIGRGMVCDPGLAWAIKA----NAALPTGDRIDAAAVGLPWHELLPLIRDFWRLVAAHIEPRARAGRLKQWLNYLRRRHPQAEAAFALVRTVNEPLRVLELL 318
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: A0A519G4V9_9BURK (tRNA-dihydrouridine(16) synthase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519G4V9_9BURK) HSP 1 Score: 437 bits (1125), Expect = 6.720e-152 Identity = 217/308 (70.45%), Postives = 249/308 (80.84%), Query Frame = 1
Query: 4 LRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLF 927
LRD+LTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPEL +GGRTPAGVPVRAQL+GSDP+C+AENA KLAALGPAGIDLNFGCPAK VNRH GGA LL +PEL+A IV AVRRAVP MPVSAKMRLG+ND + A++CA AI +GGA+E+VVHART+AD YRPPAYWER+ DIR AV IPV+ANGEIW+ADDA RCRE SGC ALM+GRGIV +PGLAL I G GV+WPALLP V +FW+++ AHI P AGRLKQWLNFLRR +PEA++ Y VR +ND +V + +F
Sbjct: 16 LRDILTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELNNGGRTPAGVPVRAQLMGSDPICLAENAGKLAALGPAGIDLNFGCPAKVVNRHGGGAALLQDPELLATIVSAVRRAVPAGMPVSAKMRLGFNDDSLAIDCAQAIESGGAEELVVHARTRADAYRPPAYWERVADIREAVRIPVVANGEIWNADDARRCREASGCHALMVGRGIVVDPGLALRIAV---------------PGHQGVAWPALLPLVFEFWKLIEAHIEPRARAGRLKQWLNFLRRHHPEAEEIYMRVRVLNDSRVVAQSVF 308
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: UPI0019BBDB9A (tRNA-dihydrouridine synthase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019BBDB9A) HSP 1 Score: 436 bits (1122), Expect = 3.640e-151 Identity = 228/320 (71.25%), Postives = 252/320 (78.75%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLFAHADAQFPVAP 960
VLRDVLTRVGGIDRCVSEFIRVT LLP+RVFTRIVPEL +GGRT AGVPVRAQLLGSDPVC+AENA +LA LGPAGIDLNFGCPA VNRH GGA LLDEP+ +A IV AVRRAVP MPVSAKMRLG+ND +RAVECALAI GGADE+VVHARTKA YRPPAYWERI DIRAAV IPV+ANGEIW+ DDA RCR+ SGC +LMLGRG V +PGL LAI+A +A PA V WP L+P +A+FWRIV A + AGRLKQWLNFLRRR+PEA+ AY +RTINDPAL+ L A AQ P P
Sbjct: 15 VLRDVLTRVGGIDRCVSEFIRVTDQLLPERVFTRIVPELLNGGRTLAGVPVRAQLLGSDPVCLAENAGRLAGLGPAGIDLNFGCPANVVNRHGGGAALLDEPDTLAAIVAAVRRAVPAHMPVSAKMRLGFNDDSRAVECALAIAGGGADELVVHARTKAQAYRPPAYWERIADIRAAVRIPVVANGEIWTVDDARRCRQASGCESLMLGRGAVTDPGLGLAIKASMGGAA-------MPA----VGWPQLMPLLAEFWRIVCARLDARARAGRLKQWLNFLRRRFPEAESAYQQLRTINDPALIDAWLAALLRAQAPAGP 323
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: UPI0009FCB08A (tRNA-dihydrouridine synthase n=1 Tax=Polaromonas jejuensis TaxID=457502 RepID=UPI0009FCB08A) HSP 1 Score: 435 bits (1119), Expect = 1.830e-150 Identity = 222/316 (70.25%), Postives = 250/316 (79.11%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALVTRQLFAHADAQF 948
VLRD+LTRVGGIDRCVSEFIR+T LLP+RVFTRIVPEL GGRT AGVPVRAQLLGSDPVC+AENAA+LA LGPAGIDLNFGCPAK VNRH GGA+LL+ PE + IV AVRRAVP MPVSAKMRLG+ND +RAVECALAI GGADE+VVHARTKA Y+PPAYWERI DIR V IPV+ANGEIW+ DDA RCRE SGC +LMLGRG+V +PGL LAI+A A + PAG AGVSWPA++P +ADFW IV + AGRLKQWLNFLRRR+PEA+ AY ++TINDP L+ L AQ
Sbjct: 15 VLRDILTRVGGIDRCVSEFIRITDQLLPERVFTRIVPELHTGGRTFAGVPVRAQLLGSDPVCLAENAARLAGLGPAGIDLNFGCPAKVVNRHGGGALLLEAPETLLAIVSAVRRAVPAHMPVSAKMRLGFNDDSRAVECALAIADGGADELVVHARTKAQAYKPPAYWERIADIREVVNIPVVANGEIWTVDDARRCREASGCDSLMLGRGMVTDPGLGLAIKASMNGLAG----SPAPAGHAGVSWPAMVPLLADFWHIVCTRLDTRSRAGRLKQWLNFLRRRFPEAETAYQLLKTINDPVLIDEWLAGVVQAQL 326
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Match: A1VLT9_POLNA (tRNA-dihydrouridine(16) synthase n=7 Tax=Polaromonas TaxID=52972 RepID=A1VLT9_POLNA) HSP 1 Score: 432 bits (1111), Expect = 9.380e-150 Identity = 218/304 (71.71%), Postives = 244/304 (80.26%), Query Frame = 1
Query: 1 VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPVRAQLLGSDPVCVAENAAKLAALGPAGIDLNFGCPAKGVNRHRGGAVLLDEPELIAQIVGAVRRAVPREMPVSAKMRLGYNDGARAVECALAIVAGGADEMVVHARTKADGYRPPAYWERIQDIRAAVAIPVIANGEIWSADDALRCREVSGCGALMLGRGIVANPGLALAIRARDRQSARLHKVNDFPAGEAGVSWPALLPFVADFWRIVGAHIAPHHHAGRLKQWLNFLRRRYPEAQQAYAAVRTINDPALV 912
VLRD+LTRVGGIDRCVSEFIR+T LLP+RVFTRIVPEL +GGRT AGVPVRAQLLGSDPVC+AENA +LA LGPAGIDLNFGCPAK VNRH GGA LLDEPE + IV AVRRAVP MPVSAKMRLG+ND +RAVECALAI GADE+VVHARTKA YRPPAYWERI DIRAAV IPV+ANGEIW+ DDA RCRE SGC +LMLGRG+V +PGL LAI+A +A AGV+WP L+P +A FW IV + AGRLKQWLNFLRRR+PEA+ AY +RT+NDPAL+
Sbjct: 14 VLRDILTRVGGIDRCVSEFIRITDQLLPERVFTRIVPELHNGGRTLAGVPVRAQLLGSDPVCLAENAGRLAELGPAGIDLNFGCPAKIVNRHGGGAALLDEPETVFAIVAAVRRAVPNHMPVSAKMRLGFNDDSRAVECALAIAGAGADELVVHARTKAQAYRPPAYWERIADIRAAVRIPVVANGEIWTVDDARRCREASGCESLMLGRGVVTDPGLGLAIKAAMNGAA----------SPAGVAWPQLVPLLAQFWHIVCTRLDARSRAGRLKQWLNFLRRRFPEAEIAYQQIRTVNDPALI 307 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19320.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19320.1.1 >prot_P-wetherbeei_contig19320.1.1 ID=prot_P-wetherbeei_contig19320.1.1|Name=mRNA_P-wetherbeei_contig19320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=325bp VLRDVLTRVGGIDRCVSEFIRVTGTLLPDRVFTRIVPELEHGGRTPAGVPback to top mRNA from alignment at P-wetherbeei_contig19320:319..1293- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19320.1.1 ID=mRNA_P-wetherbeei_contig19320.1.1|Name=mRNA_P-wetherbeei_contig19320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig19320:319..1293- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19320:319..1293- >mRNA_P-wetherbeei_contig19320.1.1 ID=mRNA_P-wetherbeei_contig19320.1.1|Name=mRNA_P-wetherbeei_contig19320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig19320:319..1293- (Phaeothamnion wetherbeei SAG_119_79)back to top |