mRNA_P-wetherbeei_contig19300.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A6I3ER82_9ACTN (Urease accessory protein UreG n=2 Tax=root TaxID=1 RepID=A0A6I3ER82_9ACTN) HSP 1 Score: 344 bits (883), Expect = 3.600e-117 Identity = 178/208 (85.58%), Postives = 188/208 (90.38%), Query Frame = 1
Query: 40 MWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAW 663
MWAFG GTRPLRIGIGGPVGSGKTALVAALCR+L E STVV+TNDIFTTEDAEALRRM VL DDRI+PVETGACPHTAIRDDISANLDAVE LEA HAPV LT++ESGGDNLTAIFSRALVD+QIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLA +V A L VMDRDAKARRG+LPI FTSLV P GA+ VA WVRAQ+A W
Sbjct: 1 MWAFGVPGTRPLRIGIGGPVGSGKTALVAALCRLLATEFSTVVVTNDIFTTEDAEALRRMAVLADDRIVPVETGACPHTAIRDDISANLDAVEQLEALHAPVDLTIIESGGDNLTAIFSRALVDKQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLASLVRADLGVMDRDAKARRGELPICFTSLVEPVGAVEVAAWVRAQIARW 208
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI0020069652 (urease accessory protein UreG n=1 Tax=Aciditerrimonas ferrireducens TaxID=667306 RepID=UPI0020069652) HSP 1 Score: 294 bits (753), Expect = 2.910e-97 Identity = 147/201 (73.13%), Postives = 173/201 (86.07%), Query Frame = 1
Query: 61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAW 663
G + LR+GIGGPVGSGKTALVA+LCR+L +E+ VV+TND++TTEDA+ LRR GVL +RI+ V+TG CPHTAIRDDI+AN DA+E LE R + L+ESGGDNLTAIFS+ALVDRQIFV+DVAGGDKVPRKGGPGVT ADLLV+NKTDLAP+VGA L+VM RDA+A+RG+LP FTSLVGPEGA VA W+RAQLAAW
Sbjct: 19 GRQTLRVGIGGPVGSGKTALVASLCRLLGEELELVVVTNDVYTTEDADFLRRRGVLPVERIVAVQTGCCPHTAIRDDIAANQDALEGLERRFPGADVALVESGGDNLTAIFSQALVDRQIFVVDVAGGDKVPRKGGPGVTRADLLVVNKTDLAPLVGADLDVMARDARAQRGELPTVFTSLVGPEGAEPVAGWLRAQLAAW 219
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: D9WE37_9ACTN (Urease accessory protein UreG n=5 Tax=Streptomyces TaxID=1883 RepID=D9WE37_9ACTN) HSP 1 Score: 294 bits (753), Expect = 3.690e-97 Identity = 154/226 (68.14%), Postives = 173/226 (76.55%), Query Frame = 1
Query: 1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPA 678
HTHG +PD R LRIG+GGPVGSGKTA VAALCR LRDE+S V+TNDI+T EDAE L R VL +RI VETGACPHTAIRDDISANL+AVE LE P+ L L+ESGGDNLTA FS+ LVD Q+FVIDVAGGD +PRKGGPGVTTADLLV+NKTDLAP VG+ LE M RDAK +RGDLP+ FTSLV PEG +ADWVR +LAAW+ PA
Sbjct: 13 HTHGADPRRPDGTR--------RALRIGLGGPVGSGKTATVAALCRALRDELSIAVVTNDIYTREDAEFLLRNAVLPAERISAVETGACPHTAIRDDISANLEAVEDLEEGVGPLDLILVESGGDNLTATFSKGLVDAQVFVIDVAGGDDIPRKGGPGVTTADLLVVNKTDLAPYVGSDLERMARDAKEQRGDLPVAFTSLVAPEGVRPIADWVRERLAAWTAAPA 230
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A1H3SBZ8_9ACTN (Urease accessory protein UreG n=2 Tax=Asanoa TaxID=195964 RepID=A0A1H3SBZ8_9ACTN) HSP 1 Score: 293 bits (749), Expect = 1.100e-96 Identity = 153/205 (74.63%), Postives = 168/205 (81.95%), Query Frame = 1
Query: 67 RPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPAH 681
R +RIGIGGPVGSGKTALVAALCR L E+ V+TNDI+TTEDA+ LRR GVL DDRI VETG CPHTAIRDDISANLDAVE LE R + L L+ESGGDNLTA FS+ LVD QIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP+VGA L VM RDA+ARRGDLP F SLVG GA VADWVR ++A ++TP H
Sbjct: 6 RAVRIGIGGPVGSGKTALVAALCRALATELRLAVVTNDIYTTEDADFLRRAGVLPDDRIRAVETGCCPHTAIRDDISANLDAVEELEERLGALDLILVESGGDNLTATFSKGLVDHQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPLVGADLGVMARDAQARRGDLPTVFLSLVGEPGAAPVADWVRDRVAEPASTPRH 210
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A7K1II44_9ACTN (Urease accessory protein UreG n=1 Tax=Nitriliruptoraceae bacterium ZYF776 TaxID=2604685 RepID=A0A7K1II44_9ACTN) HSP 1 Score: 292 bits (748), Expect = 2.190e-96 Identity = 149/200 (74.50%), Postives = 168/200 (84.00%), Query Frame = 1
Query: 61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAA 660
G R LR+G+GGPVG+GKTAL+A LCR LR+ S V+TNDIFTTEDAEALRR GVL D+RI+PVETG CPHTAIRDDI+ANLDAVEA EAR + + L+ESGGDNLTAIFSRALVD Q+FV+DVAGGDKVPRKGGPGVT+ADLLVINKTDLAP+VGA LEVM RDA ARRGDLP F SLVG E A V DW+ ++ A
Sbjct: 21 GRRTLRVGVGGPVGTGKTALIAELCRTLRERWSLAVVTNDIFTTEDAEALRRQGVLPDERIVPVETGGCPHTAIRDDIAANLDAVEAFEARWPDLDVVLVESGGDNLTAIFSRALVDVQVFVVDVAGGDKVPRKGGPGVTSADLLVINKTDLAPLVGADLEVMRRDAAARRGDLPTVFLSLVGGERAQPVVDWLEGRIDA 220
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI001941B5B0 (Urease accessory protein UreG n=2 Tax=Actinoplanes TaxID=1865 RepID=UPI001941B5B0) HSP 1 Score: 289 bits (739), Expect = 6.460e-95 Identity = 154/219 (70.32%), Postives = 170/219 (77.63%), Query Frame = 1
Query: 1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLA 657
HTH D P + G G R LRIGIGGPVGSGKTALVAALCR L +E+ V+TNDI+TTEDA+ L R GVL DRI VETG CPHTAIRDDISANLDAVE LE P+ L L+ESGGDNLTA FS+ L+D+QIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGA L VMDRDA+ARRG+LP F SL A AVADW+RA +A
Sbjct: 19 HTHPDSDVDPHAPL----GTGPRALRIGIGGPVGSGKTALVAALCRSLGEELRLAVVTNDIYTTEDADFLLRNGVLPADRIRAVETGCCPHTAIRDDISANLDAVEDLEEALGPLDLVLVESGGDNLTATFSKGLIDKQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGADLSVMDRDARARRGELPTVFQSLTEDRNATAVADWIRALVA 233
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: R4LM81_9ACTN (Urease accessory protein UreG n=18 Tax=Micromonosporaceae TaxID=28056 RepID=R4LM81_9ACTN) HSP 1 Score: 288 bits (736), Expect = 1.610e-94 Identity = 150/200 (75.00%), Postives = 163/200 (81.50%), Query Frame = 1
Query: 61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAA 660
G R LRIGIGGPVGSGKTALVAALCR L E+ V+TNDI+TTEDA+ L R GVL DRI VETG CPHTAIRDDISANLDAVE LEA P+ L L+ESGGDNLTA FS+ L+DRQIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP+VGA L VMDRDA+ARRGDLP F SL A AVADW+R +AA
Sbjct: 31 GPRALRIGIGGPVGSGKTALVAALCRALGGELRLAVVTNDIYTTEDADFLLRNGVLPADRIRAVETGCCPHTAIRDDISANLDAVEDLEATLGPLDLVLVESGGDNLTATFSKGLIDRQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPLVGADLSVMDRDARARRGDLPTVFQSLTEDRSATAVADWIRGLVAA 230
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI001942309A (urease accessory protein UreG n=1 Tax=Actinoplanes ferrugineus TaxID=113564 RepID=UPI001942309A) HSP 1 Score: 287 bits (734), Expect = 3.830e-94 Identity = 151/225 (67.11%), Postives = 168/225 (74.67%), Query Frame = 1
Query: 1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTP 675
H+H D P + + GAG R LR+GIGGPVGSGKTALVAALCR L EV V+TNDI+TTEDA+ L R GVL DR+ VETG CPHTAIRDDISANLDA+E LE P+ L L+ESGGDNLTA FS+ L+DRQIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP VGA L VMDRDA+ RRGDLP F SL GA A A W+R L + P
Sbjct: 15 HSHPHPDSDPHEPL----GAGRRALRVGIGGPVGSGKTALVAALCRTLAAEVRLAVVTNDIYTTEDADFLLRNGVLPADRVRAVETGCCPHTAIRDDISANLDAIEELETTLGPLDLILVESGGDNLTATFSKGLIDRQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPHVGADLTVMDRDARTRRGDLPTIFQSLTDDPGATAAAGWIRTHLRSGPRDP 235
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A0A8EDK7_9ACTN (Urease accessory protein UreG n=2 Tax=Streptomyces sp. 769 TaxID=1262452 RepID=A0A0A8EDK7_9ACTN) HSP 1 Score: 286 bits (733), Expect = 4.140e-94 Identity = 152/227 (66.96%), Postives = 173/227 (76.21%), Query Frame = 1
Query: 1 HTHGFHDGQPDDAMWAFGGAGTR-PLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPA 678
H GF + A G GTR LRIG+GGPVG+GKTA VAALCR+LR+E S V+TNDI+T EDAE LRR VL +RI+ VETGACPHTAIRDDISANL+AVE LE P+ L L+ESGGDNLTA FSR LVD QIFVID AGGD +PRKGGPGVTTADLLV+NKTDLAP VG L+ M RDAKA+RG+LP+ FT+L P+G VADWVRAQL W+T A
Sbjct: 5 HQDGFPERHTYSAAAPVRGDGTRRALRIGLGGPVGTGKTATVAALCRVLREEFSIAVVTNDIYTREDAEFLRREAVLPTERIVAVETGACPHTAIRDDISANLEAVEDLEESVGPLDLVLVESGGDNLTATFSRGLVDAQIFVIDTAGGDDIPRKGGPGVTTADLLVVNKTDLAPYVGVDLDGMARDAKAQRGELPVAFTALKQPDGVKPVADWVRAQLTHWTTATA 231
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A2U3C0Z3_9ACTN (Urease accessory protein UreG n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2U3C0Z3_9ACTN) HSP 1 Score: 287 bits (735), Expect = 4.340e-94 Identity = 146/200 (73.00%), Postives = 165/200 (82.50%), Query Frame = 1
Query: 67 RPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWS 666
R LR+G GGPVGSGKTA VAALCR+LRDE+S V+TNDI+T EDAE L R VL +RI VETGACPHTAIRDDISANL+A+E LE P+ L L+ESGGDNLTA FSR LVD Q FVIDVAGGDK+PRKGGPGV+TADLLV+NKTDLAP+VGA LEVM RDAKA+RGDLP+ FTSL G +G VA WVR +LAAW+
Sbjct: 51 RALRVGFGGPVGSGKTATVAALCRLLRDELSIGVVTNDIYTREDAEFLLRNAVLPPERITAVETGACPHTAIRDDISANLEAIEDLEEAVGPLDLVLVESGGDNLTATFSRGLVDAQAFVIDVAGGDKIPRKGGPGVSTADLLVVNKTDLAPLVGADLEVMARDAKAQRGDLPVVFTSLTGADGIAPVATWVRTRLAAWT 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19300.1.1 >prot_P-wetherbeei_contig19300.1.1 ID=prot_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp MWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTback to top mRNA from alignment at P-wetherbeei_contig19300:1..889- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19300.1.1 ID=mRNA_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=889bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:1..889- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19300:1..889- >mRNA_P-wetherbeei_contig19300.1.1 ID=mRNA_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:1..889- (Phaeothamnion wetherbeei SAG_119_79)back to top |