prot_P-wetherbeei_contig19237.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19237.1.1
Unique Nameprot_P-wetherbeei_contig19237.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length81
Homology
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A836CFJ6_9STRA (60S ribosomal protein L41 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.020e-20
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MQIFVKTQG-STLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLA-VGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQIFVKT    +L +D AP+ TV  + A VED EF+PA LQ L CGS QLA   TL   G+EEADT+TL L VNGGMRAKWR
Sbjct:    1 MQIFVKTLARDSLVLDVAPTSTVGDVMAMVEDREFLPAALQRLSCGSTQLASTTTLEAAGIEEADTLTLLLSVNGGMRAKWR 82          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: V9EKG6_PHYPR (60S ribosomal protein L41 n=3 Tax=Phytophthora TaxID=4783 RepID=V9EKG6_PHYPR)

HSP 1 Score: 75.1 bits (183), Expect = 6.850e-16
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:    1 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 79          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: D0NRK6_PHYIT (60S ribosomal protein L41 n=7 Tax=Peronosporaceae TaxID=4777 RepID=D0NRK6_PHYIT)

HSP 1 Score: 75.1 bits (183), Expect = 8.650e-16
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   10 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 88          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: W2KP00_PHYPR (60S ribosomal protein L41 (Fragment) n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KP00_PHYPR)

HSP 1 Score: 75.1 bits (183), Expect = 2.970e-15
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   61 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 139          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A6A4FFT9_9STRA (60S ribosomal protein L41 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FFT9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.230e-14
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+IP     LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  831 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPNF--RLVCAGKQLTSGSLADYAVGECDTLKMLLDVNGGMRAKWR 909          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A8J5JFB2_9STRA (60S ribosomal protein L41 (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JFB2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.330e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E  T+ + L VNGGMRAKWR
Sbjct:   67 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECATLKMLLSVNGGMRAKWR 145          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A6G0NVC9_9STRA (60S ribosomal protein L41 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NVC9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.650e-14
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+IP     LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  710 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPNF--RLVCAGKQLTSGSLADYVVGECDTLKMLLDVNGGMRAKWR 788          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A833WDI0_PHYIN (60S ribosomal protein L41 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WDI0_PHYIN)

HSP 1 Score: 71.2 bits (173), Expect = 7.040e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LV   +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   48 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVSAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 126          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: W2PVI0_PHYPN (60S ribosomal protein L41 n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PVI0_PHYPN)

HSP 1 Score: 73.6 bits (179), Expect = 8.090e-14
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  ++L  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  179 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKKLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 257          
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A7S2HF29_9STRA (60S ribosomal protein L41 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF29_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.210e-12
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 MQIFVK-TQGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 80
            MQIF+   QG +         +V ++KA +E+ EF+P+EL  LV G+  L  G+L   GV+E DT+T+ L VNGGMRAKWR
Sbjct:    1 MQIFIAGAQGPSTAYTVDSDASVESVKAMIENREFVPSELIRLVNGATALEGGSLLGNGVQEDDTITMLLEVNGGMRAKWR 81          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A836CFJ6_9STRA1.020e-2062.2060S ribosomal protein L41 n=1 Tax=Tribonema minus ... [more]
V9EKG6_PHYPR6.850e-1653.0960S ribosomal protein L41 n=3 Tax=Phytophthora Tax... [more]
D0NRK6_PHYIT8.650e-1653.0960S ribosomal protein L41 n=7 Tax=Peronosporaceae ... [more]
W2KP00_PHYPR2.970e-1553.0960S ribosomal protein L41 (Fragment) n=5 Tax=Phyto... [more]
A0A6A4FFT9_9STRA2.230e-1454.3260S ribosomal protein L41 n=9 Tax=Phytophthora Tax... [more]
A0A8J5JFB2_9STRA5.330e-1451.8560S ribosomal protein L41 (Fragment) n=1 Tax=Phyto... [more]
A0A6G0NVC9_9STRA5.650e-1454.3260S ribosomal protein L41 n=1 Tax=Phytophthora fra... [more]
A0A833WDI0_PHYIN7.040e-1451.8560S ribosomal protein L41 n=2 Tax=Phytophthora inf... [more]
W2PVI0_PHYPN8.090e-1451.8560S ribosomal protein L41 n=1 Tax=Phytophthora par... [more]
A0A7S2HF29_9STRA2.210e-1246.9160S ribosomal protein L41 n=1 Tax=Helicotheca tame... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 1..70
e-value: 1.3E-12
score: 57.9
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 3..69
e-value: 4.5E-10
score: 39.2
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..74
score: 15.035124
NoneNo IPR availableGENE3D3.10.20.90coord: 1..69
e-value: 1.0E-16
score: 62.6
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19237contigP-wetherbeei_contig19237:220..462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19237.1.1mRNA_P-wetherbeei_contig19237.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19237 220..892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19237.1.1 ID=prot_P-wetherbeei_contig19237.1.1|Name=mRNA_P-wetherbeei_contig19237.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
MQIFVKTQGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLA
VGTLADLGVEEADTVTLNLCVNGGMRAKWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf