mRNA_P-wetherbeei_contig1923.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A846AAJ9_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AAJ9_9CYAN) HSP 1 Score: 180 bits (457), Expect = 4.060e-49 Identity = 90/184 (48.91%), Postives = 118/184 (64.13%), Query Frame = 2
Query: 254 TVERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAF 805
++ + AA+ W D +A WQ +A FR F +AL P+ AFFWET PL+EA+ + FE L D+ + LA+V A+P+AFA+++ R D VQ+F NL D +LVVPC+ Y HLA FVR AP Q HA W+ VG +V R L E +QP WVST+G GVYWLHVRLD PKYY+H +
Sbjct: 29 SLAKTQAALRWCDVLAGWQQTAEFRQVFTQALAHMPYEAFFWETPPLSEATLQQPFECCLIDSPQ-LAKVTADPQAFADYLHAER-CDEVQAFPNLKGDTLLVVPCRGSQQQQYAHLAAFVRSAPTPQTHALWQVVGRSVARLLNEYG----QQPLWVSTSGLGVYWLHVRLDAFPKYYRHPTY 206
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A6B3M9Q3_9CYAN (Uncharacterized protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3M9Q3_9CYAN) HSP 1 Score: 179 bits (455), Expect = 9.420e-49 Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 2
Query: 278 ISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
+ W++ I WQ FR+ F L P+ AFFWET P+ + + + FEF ++ + LA V EP+AFA+HI D + D V+ F NLG DA+L+ PCQNGP +Y HLA FVR AP Q+ FW +G T+E+TL R P WVST+G GVYWLHVR+D+ PKYY+H +R
Sbjct: 45 LQWSEVIKLWQQDDEFRELFTTVLAKIPYPAFFWETPPINQKTLEQTFEFVTLNSPQ-LANVLPEPDAFAQHIGDSMNRDLVKVFPNLGGDALLIAPCQNGPQQHYTHLAKFVRCAPKKQIDKFWRTIGYTLEQTLQAREPH----PLWVSTSGLGVYWLHVRIDSFPKYYQHAPYR 216
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A6M0ELL0_9CYAN (Uncharacterized protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M0ELL0_9CYAN) HSP 1 Score: 176 bits (446), Expect = 2.090e-47 Identity = 84/177 (47.46%), Postives = 110/177 (62.15%), Query Frame = 2
Query: 278 ISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
+ W + I WQ FR+ F L P+ AFFWET P+T+ + ++FEF ++ LA V EP+AFAEHI +TD V++F NLG DA+L+ PCQN NY HLA FVR AP Q+ FW+ +G T+E+ L R P WVST G GVYWLHVR+D+ PKYY+H +R
Sbjct: 47 LQWGEVIKLWQQDNEFRELFTTVLAKIPYPAFFWETPPITQNTLEQKFEFVAINSPT-LANVPPEPDAFAEHIGHSLNTDLVKAFPNLGGDALLIAPCQNSLQANYVHLAKFVRCAPKQQIDKFWKTIGYTLEQILQARDPH----PLWVSTCGLGVYWLHVRIDSFPKYYQHTPYR 218
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A5J4EAD9_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4EAD9_9BACT) HSP 1 Score: 173 bits (438), Expect = 1.330e-46 Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 2
Query: 257 VERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
+ R+ + ++ + +WQ FR FI + +PF A +WET P+T A+ ++ FEF L D+++ L V A+P FA + D + +F+NLG+DA+LVVPC G Y HLA F R AP Q HAFW+ VG+ V L +R P W+STAG G++WLHVRLD+RPKYY HD +R
Sbjct: 19 ITRNEEPMRYSSVVEAWQEEEEFRSFFISLVTQAPFQALYWETPPVTSATFDQEFEFVLVDSSQ-LRNVRADPLTFASYFESSDVDDDIVTFWNLGKDALLVVPCPVGSDSAYAHLAEFTRNAPVAQQHAFWKHVGNAVRERLSDR-------PLWLSTAGTGIFWLHVRLDSRPKYYTHDPYR 194
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: B4VMX8_9CYAN (Uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VMX8_9CYAN) HSP 1 Score: 172 bits (437), Expect = 1.850e-46 Identity = 83/177 (46.89%), Postives = 112/177 (63.28%), Query Frame = 2
Query: 278 ISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
I +++ I WQ + FR FI L +PF AFFWET P+T+A+ N+ FEF L ++ LA V+A+P FA H + + + +F NLG+DA+LVVPC Y HLA F+R AP Q HA W+ VGS +E+ L R PTWVST+G GVYWLH+RLD+RPKYY + ++
Sbjct: 26 ILYSEIIQLWQHNPDFRAFFISLLADAPFSAFFWETPPITDATVNQVFEFVLVNSP-SLANVQADPSDFARHFSAAGENKSIVTFPNLGKDALLVVPCPQASMSPYCHLAAFMRDAPEHQQHALWQNVGSALEQRLNPR-------PTWVSTSGLGVYWLHIRLDSRPKYYTYQPYK 194
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A1I4RHU2_9PROT (Uncharacterized protein n=2 Tax=Nitrosomonas communis TaxID=44574 RepID=A0A1I4RHU2_9PROT) HSP 1 Score: 170 bits (430), Expect = 1.760e-45 Identity = 90/185 (48.65%), Postives = 114/185 (61.62%), Query Frame = 2
Query: 254 TVERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
T+ D ++IS+A+ + WQ++ F FI L SPF F WET P+T AS +R FEF L D+ GLA + + EAFAEH + D V F NLGRDA++VVPC GP Y HL F+R+AP Q H+ W VGS +ER LG + P W+STAG GV WLHVRLD RPKYY + +R
Sbjct: 18 TIHLDSSSISYAEVLYLWQSNEDFCSFFIGLLADSPFSTFCWETPPITTASADRPFEFVLLDSP-GLAS-KPDSEAFAEHF-NRAPQDEVVEFSNLGRDALMVVPCPRGPITGYGHLGAFLRQAPARQRHSLWRSVGSAMERRLGVK-------PVWLSTAGAGVSWLHVRLDDRPKYYGYVPYR 192
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A523KNF3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KNF3_9GAMM) HSP 1 Score: 170 bits (430), Expect = 1.760e-45 Identity = 89/184 (48.37%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 257 VERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
++ + +S+AD I WQ A FR FI+ L SPF AF WET P+T A+ N FEF L ++ LA + +P AFAEH D GV F NLGRDA++VVPC + P +Y HLA F+R +P Q H+ WE VG+ + R LG R P W+STAG GV WLHVRLD RPKYY + +R
Sbjct: 19 IDMGSSPVSYADVIHQWQYDAGFRSFFIDLLVGSPFSAFRWETPPITTATANHPFEFVLLNSP-DLAS-DPDPAAFAEHFID-MVPGGVVEFSNLGRDAIMVVPCPDDPLSDYGHLAAFLRHSPEPQQHSLWELVGAAMHRRLGPR-------PVWLSTAGGGVAWLHVRLDDRPKYYGYAPYR 192
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A4Z0M4D1_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0M4D1_9GAMM) HSP 1 Score: 170 bits (430), Expect = 1.760e-45 Identity = 92/193 (47.67%), Postives = 111/193 (57.51%), Query Frame = 2
Query: 230 LDAGTTLFTVERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
LDA + V RDGA + +A A+A+WQ FR FI++L++SPF AF WET L+ + R FE+ L D+ V + FA + G DT G+ F NLG DA LVVP GPA Y HLA FVR AP QVHA W VG V L R P W+STAG GV W+HVRLD PKYY H A+R
Sbjct: 9 LDARCHRYRVTRDGAPLGFAAALAAWQEDESFRGAFIDSLEASPFAAFRWETPALSRSLAAREFEYVLLDSP--WLDVAPDRATFAAYFEAGEDTPGIVQFANLGGDAQLVVPSPRGPAHCYPHLAAFVRGAPARQVHALWAAVGRVVAAELDAR-------PRWLSTAGGGVAWVHVRLDDTPKYYGHAAYR 192
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: UPI001880BA32 (hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001880BA32) HSP 1 Score: 170 bits (430), Expect = 1.880e-45 Identity = 82/185 (44.32%), Postives = 114/185 (61.62%), Query Frame = 2
Query: 254 TVERDGAAISWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
++ +G I +++ I WQ S FR FI L +PF AFFWET L++A+ N+ FEF L D+ LA V+A P FA H A + + + +F NLG+DA+LVVPC Y+H+A F+R+AP Q HA W+ VG +E+ L E P W+ST+G GVYWLH+RLD+ PKYY + +R
Sbjct: 18 SILSNGKLILYSEVIQLWQHSKDFRTFFISLLADAPFSAFFWETPALSDATINQVFEFVLVDSPN-LAGVQANPSDFASHFAAAGEKESIITFPNLGKDALLVVPCPKASTSTYRHIAAFMREAPTQQKHALWQSVGLALEQKLDEH-------PIWLSTSGLGVYWLHIRLDSYPKYYSYHPYR 194
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Match: A0A2E0Z9J9_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0Z9J9_9CHLR) HSP 1 Score: 168 bits (425), Expect = 9.290e-45 Identity = 83/176 (47.16%), Postives = 109/176 (61.93%), Query Frame = 2
Query: 281 SWADAIASWQTSAPFRDCFIEALKSSPFMAFFWETVPLTEASKNRRFEFALTDATRGLARVEAEPEAFAEHIADGRDTDGVQSFYNLGRDAVLVVPCQNGPADNYKHLANFVRKAPPTQVHAFWEQVGSTVERTLGERSAQAPRQPTWVSTAGQGVYWLHVRLDTRPKYYKHDAFR 808
++ + + WQ+ PFR FI L +PF A+FWET P+T+ + R FEF L +A + LA+V A+ AFA + + D V F NLG DA L+VPC PAD + HLA F R A Q H FW++VG+ V+ +GER P WVST+G GVYWLHVRLD+RPKYY +R
Sbjct: 26 TYQETVQKWQSDEPFRIFFINLLADAPFAAYFWETPPITKETLIRPFEFVLVNAPQ-LAKVPAQRHAFASYFSADPVPDPVVDFPNLGGDAHLIVPCPQAPADQFAHLAIFCRSASLVQQHQFWQRVGTAVQNQVGER-------PLWVSTSGLGVYWLHVRLDSRPKYYTFGPYR 193 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1923.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1923.2.1 >prot_P-wetherbeei_contig1923.2.1 ID=prot_P-wetherbeei_contig1923.2.1|Name=mRNA_P-wetherbeei_contig1923.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp MPRWFDVFSWKLFILPVIVFMAFRTSRPSEGAVREPAFVASSSMLDAGTTback to top mRNA from alignment at P-wetherbeei_contig1923:861..3128- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1923.2.1 ID=mRNA_P-wetherbeei_contig1923.2.1|Name=mRNA_P-wetherbeei_contig1923.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2268bp|location=Sequence derived from alignment at P-wetherbeei_contig1923:861..3128- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1923:861..3128- >mRNA_P-wetherbeei_contig1923.2.1 ID=mRNA_P-wetherbeei_contig1923.2.1|Name=mRNA_P-wetherbeei_contig1923.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig1923:861..3128- (Phaeothamnion wetherbeei SAG_119_79)back to top |