mRNA_P-wetherbeei_contig19222.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A1G0K7Y9_9GAMM (Rieske domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K7Y9_9GAMM) HSP 1 Score: 417 bits (1073), Expect = 2.290e-143 Identity = 194/316 (61.39%), Postives = 236/316 (74.68%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHVECQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANREAA 948
R+++ S++L+R DG +ALQNRCCHRSFPL HG L+GD I+CGYHG Y G+C+ +P Q + P ++RLR Y VER PFVW W G DAADE LLP P WLG+ DWD+YIGYL I SYVHMHENLLDLSHLSFLH TFGTPEYARAP+EL + + +VWRHVEC LP IYA PL W+G +A RSSG+Q+V+PGLHVNTG L+NL +P Q PQPTI+VAQ+ITP + HY+FA CRNFAR P+ID FM AQ AFSED FAMEQI+RM L+ + E+ + D AG++MRRYL+ LA+ EAA
Sbjct: 49 RQILGRSVLLFRREDGTPVALQNRCCHRSFPLEHGKLDGDVIQCGYHGFRYDCTGKCVAVPSQPQPPENIRLRRYRAVERKPFVWIWAGEHDAADECLLPQPEWLGSPDWDLYIGYLNIKGSYVHMHENLLDLSHLSFLHETTFGTPEYARAPIELTVAEPNFEVWRHVECVLPGIYAKPLGWEGQKALRSSGAQYVSPGLHVNTGFLKNLSVPEEQQQPQPTIKVAQLITPETQRSTHYYFAACRNFARNDPEIDAFMLKAQTTAFSEDLFAMEQIARMQALESREDYYEIDVAADRAGVSMRRYLKKLADAEAA 364
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A3A0EV46_9PROT (Vanillate monooxygenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EV46_9PROT) HSP 1 Score: 377 bits (968), Expect = 3.100e-127 Identity = 177/316 (56.01%), Postives = 223/316 (70.57%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHVECQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANREAA 948
R ++ S++LYR G+ +AL NRCCHRSFPL+ G LEGD + C YHGL Y G CI IP Q + P + +R Y +ER P VW W G + + LPHP WLG DWD+ IGY+ + SYVH+HENLLDLSHLSFLH TFGTPEYA AP+E I+GDDIQVWRHV C LP +YA PL W+G RA R SGSQFV+PGLHVN+G+ NLELP Q P P ++VAQIITP + R+HY++A CRNF RG P++ FM AF+ED +A+E+I+ MH ++ + F E+ I D AGL MRR+L++LA+REAA
Sbjct: 49 RTLLGVSVLLYRTEAGEPVALHNRCCHRSFPLSEGKLEGDTVVCRYHGLRYDAMGSCIAIPSQTQSPGKIGVRRYITMERGPLVWIWMGDPALSASTPLPHPEWLGHPDWDIEIGYVNVKGSYVHLHENLLDLSHLSFLHETTFGTPEYAAAPIETKIEGDDIQVWRHVPCVLPPLYAKPLGWEGMRAIRHSGSQFVSPGLHVNSGVFENLELPKEKQTPPPMVKVAQIITPESQDRVHYYYAFCRNFVRGNPEVGAFMIKGFTAAFNEDVYALEKITDMHAQEDASRFYEIDIAADRAGLQMRRHLKALADREAA 364
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A6L8ELD3_9GAMM (Rieske 2Fe-2S domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8ELD3_9GAMM) HSP 1 Score: 355 bits (910), Expect = 8.950e-119 Identity = 164/312 (52.56%), Postives = 218/312 (69.87%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHVECQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLAN 936
R+ + S VL+R DG +ALQNRCCHRSFPL+ G L GD + CGYHG Y GRCI +P Q++ P ++ +RA+P++E+ PF+W W G D ADE+LLPH + DW + IG+L I SYVH+HENLLDLSHLSFLH +TFGTPEYA+AP+E ++ + +VWRHVEC LP IY+ PL W+ +A RSSGS FV PGLHVNTGIL+NL+ P + QP ++VAQ+ITP + +Y++A CRNF ++ FM A AFSED FA+E I+RM +D F E+ +P D G+AMRR+L+ L++
Sbjct: 46 RQYLGISTVLFRKEDGTPVALQNRCCHRSFPLSEGKLFGDVLECGYHGFRYNTSGRCIAVPSQDRPPQNIGVRAFPVIEKKPFIWIWPGDPDLADEALLPHQEYFDHPDWAVNIGFLNIKGSYVHLHENLLDLSHLSFLHDKTFGTPEYAKAPIESTVEDEHFEVWRHVECVLPPIYSKPLGWENEKALRSSGSLFVTPGLHVNTGILKNLDKPEKMEKLQPLVKVAQLITPETNTSTNYYYAQCRNFCIDDEEMGAFMLKANQAAFSEDVFAIEHINRMQDIDRTPDFYEIDVPADRPGVAMRRHLKRLSD 357
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: UPI00031A2A13 (aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Rhizorhabdus wittichii TaxID=160791 RepID=UPI00031A2A13) HSP 1 Score: 317 bits (813), Expect = 7.910e-104 Identity = 161/319 (50.47%), Postives = 206/319 (64.58%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHVECQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMH---IPTDAAGLAMRRYLQSLANREAA 948
R + S++ +R DG A+QNRC HRS+PL+ G+L+G+ I CGYHGL Y G C+++P +R+YP+VERA FVW W G A+ A + +PHP WLG W GY SYVH+HENLLDLSHL++LH TFGTPE+A AP+E IK DDIQVWR+VECQLP IY++PL W+G RA R SGSQ V+PGLHVNTGI NLEL A P+P ++VAQ+ITP + +HY +A RNFA + D + AF ED A+ +I++MH E P E+ IPTD AGL MRR + L + E A
Sbjct: 57 RTICGKSILFFRDADGGVHAMQNRCGHRSYPLSAGTLDGNEIVCGYHGLRYNAQGICVQLPDGGCPRGRFGVRSYPLVERASFVWIWVGDAELAKSTPVPHPEWLGGEGWSFVTGYSHAEGSYVHLHENLLDLSHLTYLHAATFGTPEFALAPIETEIKDDDIQVWRNVECQLPPIYSIPLGWEGQRALRRSGSQLVSPGLHVNTGIFENLEL-AEQPVPKPMVKVAQLITPETQHSIHYHYAVARNFALDDDAVGDHLLKGSQAAFREDIEALRRITQMHA--EAGPGGEVFEFDIPTDRAGLEMRRRFKKLIDLEEA 372
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: UPI001914A152 (aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Paraburkholderia domus TaxID=2793075 RepID=UPI001914A152) HSP 1 Score: 293 bits (751), Expect = 1.230e-94 Identity = 147/314 (46.82%), Postives = 203/314 (64.65%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHV-ECQLPDIYAVPLQWQGCRAQ--RSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLA 933
R ++ S+V YR TD + +ALQNRC HRSFPLA G+LEGD +RCGYHGL + G C+++P QN IP L +R YP+VER P+VW W G AD ADESL+P WL + DW Y+ ++YV +HENLLDLSH ++LHP T GTPEYAR P E+ GD +++ R V EC +P IY + G + + R + S FV P LH + ++R+L+ +D TI ++ ITP ++ HYWFA R+FA P++ +M A+ +KAF ED A+ +I+RM+ L+ P E+HI +D AG+A RR L+ LA
Sbjct: 49 RTLLGESVVFYRRTDEKPVALQNRCPHRSFPLAQGALEGDNVRCGYHGLAFDSSGACVDVPTQNVIPPSLCIREYPVVERGPYVWIWMGKADMADESLIPDTSWLWSPDWTFAEDYVSFNANYVGLHENLLDLSHFTYLHPSTLGTPEYARTPCEVDADGDRVRISRFVAECDVPPIY----EKTGIKGKMSRHTVSDFVTPALHHASAVMRDLKEDRERRDF--TIYISHFITPATQNSTHYWFAFARDFALTNPEVTRYMGASALKAFREDIHALHEITRMYSLEPQAPSYEIHIKSDQAGVATRRVLRRLA 356
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A2U1CNF5_9BURK (Vanillate O-demethylase monooxygenase subunit n=2 Tax=Pusillimonas noertemannii TaxID=305977 RepID=A0A2U1CNF5_9BURK) HSP 1 Score: 288 bits (736), Expect = 2.130e-92 Identity = 143/317 (45.11%), Postives = 202/317 (63.72%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHV-ECQLPDIYAVPLQWQGCRAQ--RSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANRE 942
R + SLVLYR GQ +AL NRC HRSFPL HGSLEGD +RCGYHGL + +DG C EIP Q +P + R++P+ ER PFVW W G ADE+ +P WL W+ YL + ++YV++HENLLDLSH ++LHP T GTPEYAR P ++ + G +++ R V EC LP IYA G + + R + S+FV+P +H + ++ +L+ A Q TI + TP + HYWFA R+FA P +D++MR++ + AF+ED+ A+++ISR++R + P E+HI +D AG+AMRR + +LA E
Sbjct: 47 RTFLGQSLVLYRTLAGQPVALLNRCPHRSFPLVHGSLEGDLLRCGYHGLTFRQDGSCGEIPAQATVPPGVCTRSFPVAERGPFVWIWMGDPAQADETAIPDTSWLVDPAWNHVSSYLELDANYVYLHENLLDLSHFTYLHPTTLGTPEYARTPFDVEVDGSRVRIKRFVKECDLPPIYAKT----GIKGKISRRTESEFVSPAIHHASALMTDLQA-GAGQRSDFTILITHFATPQTQDTTHYWFAFARDFALNDPQVDEYMRSSALTAFNEDRHALQEISRIYRSEPKAPETEIHIKSDKAGVAMRRIILNLAADE 358
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A1E3ZJ91_9BORD (Rieske domain-containing protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3ZJ91_9BORD) HSP 1 Score: 275 bits (704), Expect = 7.460e-88 Identity = 141/318 (44.34%), Postives = 197/318 (61.95%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHV-ECQLPDIYAVPLQWQGCRAQ--RSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANREA 945
R ++ S+VLYR G+ + LQNRC HRSFPLA GSLE DA+RCGYHGL + G+C++IP Q IP L +R+YP VER PFVW W G AD L+P PWL + DW Y+ + ++YV +HENLLDL+H ++LHP T GTPEYARAP ++ + +++ R V EC +P IY G R + R + S+F+ P LH + +LR+LE D T+ ++ +TP D+ R HYWF R+F I +F + + AF+ED A+++I+RMH E+ + +D AG+A RR L+SLA+REA
Sbjct: 29 RSLLGESVVLYRTEAGRPVVLQNRCPHRSFPLAKGSLEADAVRCGYHGLAFDSGGKCVDIPSQEVIPPRLAIRSYPAVERGPFVWVWMGDPADADPGLVPATPWLASQDWTYASNYVFLGANYVGLHENLLDLTHFTYLHPTTLGTPEYARAPFQVEAGSETVRISRLVPECDVPAIYRTT----GMRGKMSRHTVSEFLTPALHHASAVLRDLEA-----DGVYTVYISHFVTPADQDRTHYWFTFARDFQIADQAITEFTERSALHAFNEDVDALQEIARMHGSGPDAK-REISLKSDQAGVAARRILRSLADREA 336
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A2C9B9B5_9BURK (Vanillate O-demethylase monooxygenase subunit n=1 Tax=Burkholderia sp. D7 TaxID=1873884 RepID=A0A2C9B9B5_9BURK) HSP 1 Score: 244 bits (622), Expect = 4.290e-75 Identity = 132/323 (40.87%), Postives = 184/323 (56.97%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIP-AHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHV-ECQLPDIYAVPLQWQGC-RAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPT------IRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANRE 942
R V+ LV YR TDG+ + LQNRC HRS PL+ G LEGD IRCGYHGLL+ RDG CIEIP Q+ P A +R+ AYP VE P VW W G A+ + +P WL W GY+ + ++YV +HENL+DLSH ++LHP GTPEYA AP E++ D +++ R V +C +PDIY P R R + S+++ PG++ IL NL PQP +R++ ITP HY+F R+FA ++ F+ AF +D A+ I + + F E ++ +D AG+AMRR L+ L+ ++
Sbjct: 50 RRVLGKELVFYRATDGKPVVLQNRCPHRSMPLSKGCLEGDQIRCGYHGLLFERDGACIEIPSQSAPPPASVRINAYPCVETEPLVWVWMGDPAQANPADIPATGWLDDPAWVYAHGYVHVPANYVGLHENLMDLSHFTYLHPGNIGTPEYAAAPFEVSTHDDYVRISRFVPDCAVPDIYTKPTGLAAHQRISRETVSEYLTPGMNTAYAILTNLA-------PQPDAKEKFEVRISHFITPESSDTTHYFFTFARDFAVADQEVTRFIERGAKMAFGQDVDALLAIRDIATAEAGRSFEEANLRSDQAGVAMRRILKRLSEQQ 365
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A1H4FY61_9GAMM (Vanillate O-demethylase monooxygenase subunit n=2 Tax=Marinobacterium georgiense TaxID=48076 RepID=A0A1H4FY61_9GAMM) HSP 1 Score: 241 bits (616), Expect = 4.430e-74 Identity = 137/319 (42.95%), Postives = 183/319 (57.37%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLGASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHV-ECQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQ----ISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANRE 942
R ++ LVLYR +G+ +AL NRC HRSFPL+ SLEGD I CGYHGL Y G C+E+P Q A + +R+YP+VE+ P VW W G D AD +P P L W Y+P+ +SYV++HENLLDL+HLSFLH TFGTP+YA A + I D + R+V +LP ++A P +G A R + S FV+P LH+ ++ LP + + P I+ A I TP + HY+ RNFA I DFM + AF ED +E +S M R DE F E+ + +D A +AMRRYL+ A E
Sbjct: 45 RTILGRQLVLYRQENGEPVALDNRCGHRSFPLSRSSLEGDTIVCGYHGLRYDASGSCVEVPSQCNC-AGISIRSYPLVEQGPVVWIWMGEPDQADPKQIPAMPMLDQG-WITSCDYMPLKASYVYLHENLLDLTHLSFLHANTFGTPDYAAAEFDTEISEDRFILKRYVVPTRLPPVWAKPTGLEGRDAARITTSDFVSPALHIVHAQFYDIALPESER-PDTRIKTAHIPTPETATSTHYFVVHGRNFAPEDDSITDFMHQQLMAAFHEDIVGLEAMEELLSNMSREDE---FFEISVKSDIASVAMRRYLKRRAEAE 357
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Match: A0A838L3K6_9SPHN (Aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Sphingomonas chungangi TaxID=2683589 RepID=A0A838L3K6_9SPHN) HSP 1 Score: 239 bits (610), Expect = 2.090e-73 Identity = 138/316 (43.67%), Postives = 184/316 (58.23%), Query Frame = 1
Query: 1 REVMETSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARDGRCIEIPMQNKIPAHLRLRAYPMVERAPFVWAWFGAADAADESLLPHPPWLG-ASDWDMYIGYLPIASSYVHMHENLLDLSHLSFLHPRTFGTPEYARAPVELAIKGDDIQVWRHVE-CQLPDIYAVPLQWQGCRAQRSSGSQFVAPGLHVNTGILRNLELPAAAQDPQPTIRVAQIITPIDRSRLHYWFAGCRNFARGQPDIDDFMRAAQIKAFSEDQFAMEQISRMHRLDEHTPFAEMHIPTDAAGLAMRRYLQSLANRE 942
R ++ ++VLYR G +A+++RC HRSFPL+ ++EGD I CGYHG+ Y DG C +P Q P +R++ Y + E AP VW W G A + LP W A W + G + + S+YV +HENLLDLSHLSFLH +TFGTP+YA AP I D I V R V +LP +YA PL G A R S + +PGL V+ +L+NLELP + IR AQ++TPIDR + Y F R+F + + + A AF ED FA+E I+R R DE PF E I +D AG+ +RR L+S A E
Sbjct: 47 RRLLGINVVLYRTASGAVVAMRDRCPHRSFPLSASAIEGDDIVCGYHGIRYGPDGACKAVPTQKHAPKVMRVQTYAVRETAPMVWIWLGDPGRAATTALPPCEWATRAHGWALSAGSMTLHSNYVFLHENLLDLSHLSFLHKKTFGTPDYAAAPFSTDIGEDRIVVRRTVAPTRLPPLYADPLDIHG-DAARIVTSTYHSPGLSVSAVVLQNLELPEGERTDHH-IRTAQLLTPIDRDHVLYHFVIARDFVKDDAQTSETIHAGIKAAFVEDCFALENIARNRREDE-APFVERSITSDKAGVMLRRRLRSEALAE 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19222.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19222.1.1 >prot_P-wetherbeei_contig19222.1.1 ID=prot_P-wetherbeei_contig19222.1.1|Name=mRNA_P-wetherbeei_contig19222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=314bp METSLVLYRGTDGQAIALQNRCCHRSFPLAHGSLEGDAIRCGYHGLLYARback to top mRNA from alignment at P-wetherbeei_contig19222:346..1296- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19222.1.1 ID=mRNA_P-wetherbeei_contig19222.1.1|Name=mRNA_P-wetherbeei_contig19222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=951bp|location=Sequence derived from alignment at P-wetherbeei_contig19222:346..1296- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19222:346..1296- >mRNA_P-wetherbeei_contig19222.1.1 ID=mRNA_P-wetherbeei_contig19222.1.1|Name=mRNA_P-wetherbeei_contig19222.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig19222:346..1296- (Phaeothamnion wetherbeei SAG_119_79)back to top |