mRNA_P-wetherbeei_contig19218.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19218.1.1
Unique NamemRNA_P-wetherbeei_contig19218.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A4Y8ZRV1_9SPHN (Glycogen debranching protein GlgX n=1 Tax=Sphingomonas parva TaxID=2555898 RepID=A0A4Y8ZRV1_9SPHN)

HSP 1 Score: 348 bits (894), Expect = 2.170e-112
Identity = 168/309 (54.37%), Postives = 216/309 (69.90%), Query Frame = 1
Query:   10 RLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVV-APSTSAA--SPGPR-------IPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            RL  G P PLG TP+  G N A+ S +A  +E CLF+  G +E+ RIRLPER+GDVWHGH+ G+  G  YG R +GPF PA GHRFN +KLL+DP+A+  DR F L P+++G+  G    DL FDT DSA  MPK IV  AP  +    S G R       +PW +T++YELH +GFT  +G++PE +RGT SGLA PA+++HLV+LG+T++E++P AA+IDERHL PLGLSNYWGYNPV F AP+PR    G A +RA +  +  AGI+ IVDVV NHSGE D LGPT+  RG+DNA+YYR +  D R
Sbjct:    2 RLGEGRPEPLGVTPEGAGVNVAIFSAHAGGIEFCLFDADGTREIARIRLPERSGDVWHGHIEGVPVGARYGLRAHGPFAPAEGHRFNPNKLLVDPHARLIDRQFALHPTMFGYPEGGD--DLGFDTRDSAPFMPKAIVTEAPERANGKDSGGERPALGRAFVPWAETVLYELHVRGFTMRHGEVPEAVRGTFSGLAHPAAIDHLVRLGVTSVEILPAAAWIDERHLGPLGLSNYWGYNPVAFAAPDPRLAPGGWAEIRATVEALAVAGIETIVDVVLNHSGEGDALGPTLSLRGLDNASYYRLRREDAR 308          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: UPI0010C93C82 (glycogen debranching protein GlgX n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C93C82)

HSP 1 Score: 348 bits (893), Expect = 4.290e-112
Identity = 165/305 (54.10%), Postives = 213/305 (69.84%), Query Frame = 1
Query:    1 MTSRLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPSTSAAS-PGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYL--ANGGANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            M   L+ G P PLGAT D  G NFAL S N ERVELCLF+  G++E+ R+ LPERTGD+WHG+L G   G +YGYRV+GP+DP RGHRFN +KLLIDPYA+A     R    + G+  G P ADLSFDT DSA  +PK +VVAP+ +  S P P  PW DTIIYE H  G +K +  +P   +GT +G+A PA +EHLVKLG+T IEL+P+ AF+DE  +   G+ NYWGYN + F AP P YL  A      +A + ++HEAGI+VI+DVV+NH+ ES+E+GPT+ +RG+DNA+YY  +  DPR
Sbjct:    1 MNDGLTSGVPAPLGATFDGAGVNFALFSANGERVELCLFDAEGERELRRLDLPERTGDIWHGYLEGARPGLVYGYRVHGPYDPQRGHRFNPNKLLIDPYARALRGSLRWRDEILGYQAGSPEADLSFDTRDSAPFVPKSVVVAPNLAGLSHPRPHHPWTDTIIYEAHVVGLSKTHPAVPGAQQGTFAGVASPAIIEHLVKLGVTAIELLPIQAFVDEHPVARRGMHNYWGYNTLAFFAPHPPYLGAAPNPYGFKAMVERLHEAGIEVILDVVYNHTAESEEIGPTLAFRGLDNASYYWLRDDDPR 305          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A395D0Q2_9HYPH (4-alpha-glucanotransferase (Fragment) n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A395D0Q2_9HYPH)

HSP 1 Score: 339 bits (869), Expect = 4.560e-112
Identity = 158/302 (52.32%), Postives = 208/302 (68.87%), Query Frame = 1
Query:    1 MTSRLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPSTSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            M+ R+S GAP PLG T D  G N A+ S +AE ++LCLF+ AG+ E+ER+RLP RTGD++H H+ G+   + YG R +GP+ P RGHRFN  KLL+DPYA A DR F L PS++ H             TDSA  +PKG+V  P  + AS  P+  W +TIIYELH +GFTK    +PE LRGT +GLA  A+++HL KLG+T +E+MP AA++DERHL   GL+NYWGYNP+  +AP+PR    G A + AA+A +H AG++V+VD VFNH+GE DE GP +  RG+DNA YYR +  DPR
Sbjct:    1 MSRRVSEGAPEPLGVTLDAAGANIAVYSAHAEAIDLCLFDDAGEIEIERLRLPARTGDIFHAHVEGVREDRRYGLRAHGPYAPQRGHRFNAAKLLVDPYALAIDRAFALHPSMFDH------------RTDSAPFVPKGVVTRPRAADASARPKRRWDETIIYELHVRGFTKRLKGVPEPLRGTFAGLAHEAAIDHLAKLGVTAVEIMPAAAWVDERHLAASGLANYWGYNPIAMMAPDPRLAPGGWAEVTAAVAALHAAGLEVVVDAVFNHTGEGDEFGPILSLRGLDNAAYYRLQPDDPR 290          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A7C2SQL7_9DELT (Glycogen debranching enzyme GlgX n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2SQL7_9DELT)

HSP 1 Score: 348 bits (892), Expect = 8.880e-112
Identity = 168/301 (55.81%), Postives = 214/301 (71.10%), Query Frame = 1
Query:   10 RLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPS-TSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGG-ANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            R+  G+P PLGAT D RG NFAL S +AERVELCLF+  G +E+ RI LPE T  VWH +L  +  GQLYGYRVYGP+DPARGHRFN HKLL+DPYAKA   PFR + +L+G+  G    DLSFD  +SA  +PK  VV  + T A    P   W DT+IYELH +G+T  + ++  +LRGT +GLA PA + HL  LG+T +EL+P+ AF+D RHL   GL NYWGY+ + F APEPRYLA+G    ++  +  +H+AGI+VI+DVV+NH+GE D LGPT+C+RGIDNA+YYR   GD R
Sbjct:    7 RVWPGSPHPLGATWDGRGVNFALFSEHAERVELCLFDARGQRELHRIALPEYTDQVWHAYLPDVRPGQLYGYRVYGPYDPARGHRFNPHKLLLDPYAKALSGPFRWSDALFGYRAGHRAGDLSFDRRNSAPGVPKCRVVDTAFTWAGDRPPARAWHDTVIYELHVRGYTMRHPEVAPQLRGTFAGLAAPAVVAHLRALGVTAVELLPIHAFVDARHLVQRGLRNYWGYDSIAFFAPEPRYLASGELGEVKTLVQHLHDAGIEVILDVVYNHTGEGDALGPTLCFRGIDNASYYRLVPGDER 307          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A5N7YMC5_9HYPH (Glycogen debranching protein GlgX (Fragment) n=1 Tax=Starkeya sp. TaxID=1873494 RepID=A0A5N7YMC5_9HYPH)

HSP 1 Score: 343 bits (879), Expect = 3.000e-111
Identity = 167/298 (56.04%), Postives = 207/298 (69.46%), Query Frame = 1
Query:   13 LSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSF-DTTDSAADMPKGIVVAPSTSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDP 903
            L+ G+P PLG T D RG N A+ S +A R+E CLF+ AG+ E+ RI LPERTGDV+HGH+AG+ AG  YG R  GP+ P  GHRFN  KLL+DPYA+  DRPFRL  +L+     D RA  +  D TDSA  +PK IV+     A +P     W   ++YELH +GFT  +  +P  LRGT +GLA+PA+L+HLV+LG+TT+ELMP  A+IDERHLPPLGLSNYWGYNPV F AP+PR    G   +   IA +H AGI V++DVV NHSGESD  GPT+  RG+DNATYYR  A DP
Sbjct:    6 LAPGSPEPLGVTLDGRGVNVAVFSAHATRIEFCLFDAAGEVEIARIALPERTGDVFHGHIAGVSAGSRYGLRAAGPWAPKEGHRFNPAKLLVDPYARRLDRPFRLDAALF-----DNRASGALHDETDSAFALPKAIVMGAEAEAVAPRAPFRWDRQVLYELHVRGFTMRHEAIPPALRGTFAGLAEPAALDHLVRLGVTTVELMPAMAWIDERHLPPLGLSNYWGYNPVVFGAPDPRLAPGGFEEIARTIAALHAAGIAVVLDVVLNHSGESDAFGPTLSLRGLDNATYYRHAADDP 298          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: UPI0013571D5F (glycogen debranching protein GlgX n=1 Tax=Geminicoccus sp. CPCC 101082 TaxID=2506407 RepID=UPI0013571D5F)

HSP 1 Score: 347 bits (890), Expect = 3.230e-111
Identity = 167/307 (54.40%), Postives = 214/307 (69.71%), Query Frame = 1
Query:    1 MTSRLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPSTSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGAN-----LRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            M  R+  G P PLG T D  G N AL +++AERVE C+F+  G  E+ R+ LP+R   V  G + GIG G  YG+RV+GP+ P  GHRFN +KLL+DP+AKA DRPFRL PS++G+  G   ADLSFD +DSA DMPK IV AP        PR P+  T+IYE H +G T+L+  LPE+LRG  + LA+P  L+HL +LG+TT+EL+P+ A +DERHL   GLSNYWGYNP  + APEPRYL +G A+     L A I ++H+AGI+VI+DVV+NHS ESDELGPT+  RG+DNA YYR   G+ R
Sbjct:    1 MDLRVLPGRPNPLGVTLDGDGVNVALPTLHAERVEFCVFDAEGGTELARLTLPDRAAGVVFGRIEGIGPGTRYGFRVHGPYAPDAGHRFNPNKLLLDPFAKAIDRPFRLTPSMFGYRRGAADADLSFDASDSARDMPKAIVTAPVAPRPDSRPRTPFGHTVIYEAHVRGMTRLHPALPERLRGRFAALAEPPVLDHLRRLGVTTLELLPVHAILDERHLADAGLSNYWGYNPAAYSAPEPRYLVDGQADGPADELAATIERLHQAGIEVILDVVYNHSAESDELGPTVSLRGLDNALYYRLDPGNRR 307          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: E3I3Q7_RHOVT (4-alpha-glucanotransferase n=5 Tax=Rhodomicrobium TaxID=1068 RepID=E3I3Q7_RHOVT)

HSP 1 Score: 359 bits (921), Expect = 8.040e-111
Identity = 173/303 (57.10%), Postives = 219/303 (72.28%), Query Frame = 1
Query:   10 RLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVV----APSTSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGANLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            R+  G+P PLG T D RG NFA+ S +A  +E CLF+ AG++E+ERIRLP RTGDVWHG + GIGAG  YG R +GP+DPA GHRFN  KLL+DPYA   DRPF+L  S++G+  G    DL+ D TDS A MPK I +     P  + A      P    I+YELH KG+TK N  +PE +RGT +GLA PA++EHLVKLG+T +EL+P AA+IDERHL  +GL+NYWGYNPV F+AP+PR   +G A +RAA   +H AGI++IVDVVFNH+GE DELGPT+ +RG+DNA+YYR +A D R
Sbjct:    5 RVGDGSPEPLGLTLDGRGANFAVFSAHATAIEFCLFDAAGEREIERIRLPSRTGDVWHGRVEGIGAGTRYGLRAHGPYDPANGHRFNPAKLLVDPYALTLDRPFKLHASMFGYRPG--TDDLTRDDTDSVAAMPKAIALDLSHQPRDARAFAATGAP---AILYELHVKGYTKRNPHVPEPVRGTFAGLADPAAIEHLVKLGVTAVELLPCAAWIDERHLAAVGLTNYWGYNPVAFMAPDPRLAPDGWAEVRAATDALHAAGIEIIVDVVFNHTGEGDELGPTVSFRGLDNASYYRLRADDSR 302          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A1Y6CDB1_9HYPH (Glycogen operon protein n=2 Tax=Tistlia TaxID=1321364 RepID=A0A1Y6CDB1_9HYPH)

HSP 1 Score: 345 bits (884), Expect = 9.740e-111
Identity = 165/297 (55.56%), Postives = 211/297 (71.04%), Query Frame = 1
Query:    1 MTSRLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPS-TSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGA--NLRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYY 882
            MT +L  G+PFPLGAT D  G NFAL S NA +VELCLF+  G +E +RI LPE T +VWHG+L  +  GQLYGYRV+GP DP  GHRFNH+KLLIDPYA A     R   +L+G+  G  R DLSFD  DSA  MPK +V+ P+ T  A   P++PW +TIIYE H +G T  +  LP +LRGT +GLAQP  +EHLVKLG+T +ELMP  AF D+R+L   GL+NYWGYN + F AP  RY++ GG     +  + ++HEAGI+V++DVV+NH+ E +ELGPT+ +RGIDNA+YY
Sbjct:    1 MTMKLEAGSPFPLGATWDGSGVNFALFSANATKVELCLFDRNGRRETDRIALPEFTHEVWHGYLPQVRPGQLYGYRVHGPHDPRNGHRFNHNKLLIDPYALALHGEIRWHDALFGYRVGHARGDLSFDRRDSAFVMPKCVVIDPAATWGADRPPKVPWAETIIYEAHVRGMTARHPDLPPQLRGTFAGLAQPQVIEHLVKLGVTAVELMPSQAFFDDRYLVEKGLANYWGYNTIGFFAPASRYISRGGDVHEFKLLVRRLHEAGIEVLLDVVYNHTAEGNELGPTLSFRGIDNASYY 297          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: A0A1Q7BKN5_9PROT (Glycogen debranching enzyme GlgX n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BKN5_9PROT)

HSP 1 Score: 343 bits (881), Expect = 2.410e-110
Identity = 170/301 (56.48%), Postives = 211/301 (70.10%), Query Frame = 1
Query:   10 RLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPS-TSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGAN-LRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            R+S GAP PLGAT D RGTNFAL S NAE+VELCLF+  G +E+ERI LPERT DVWHG+L  +  GQLYGYR YGP+ P RG RFN HKLLIDPYAK        + + +G+  G PRADLSFD  D+A  MPK +VV  + T        IPWQDTIIYE H KG T+L   +P   RGT  GLA PA ++HL +LG+T IEL+P+ AFID+RHL   GLSNYWGYN + F APE RY  +G  +  R+ ++++H+AGI+VI+DVV+NH+ E + LGPT+ +RGIDN +YY      PR
Sbjct:    2 RVSAGAPHPLGATWDGRGTNFALFSANAEKVELCLFDSHGRREIERISLPERTEDVWHGYLNDVAPGQLYGYRAYGPYHPERGLRFNPHKLLIDPYAKQLVGRLVWSDAHFGYRAGSPRADLSFDRRDNARGMPKSMVVDEAFTWGEERRLSIPWQDTIIYETHVKGLTQLRDDVPPAWRGTYRGLAAPAVIDHLRRLGVTAIELLPIHAFIDDRHLIERGLSNYWGYNTIGFFAPEARYAVDGPLDAFRSTVSRLHDAGIEVILDVVYNHTAEGNHLGPTLSFRGIDNTSYYWLLPDQPR 302          
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Match: UPI001BCF87C7 (glycogen debranching protein GlgX n=1 Tax=Chelatococcus sp. YT9 TaxID=2835635 RepID=UPI001BCF87C7)

HSP 1 Score: 343 bits (880), Expect = 5.230e-110
Identity = 165/307 (53.75%), Postives = 216/307 (70.36%), Query Frame = 1
Query:   10 RLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERIRLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYAKATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVV-------APSTSAASPGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKLGITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGAN-LRAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGDPR 906
            RL  G+P+PLGAT D  G NFA+ S NAER++LCLF+P+G +E+ R+ LPE T  V+HG+L    AG LYGYR YGP++P RGHRFNHHKLL+DPYA+A     R + +L+G+     RADLSFD  DSAA MPK IV         P+  +    P +PW +T+IYE H +G T     +    RGT + LA+PA +EHLVKLG+TTIEL+P+ AF+ +RHL   GL NYWGYN ++F APEPRYL++G    LR A+ ++H AGI+VI+DVV+NH+ E  ELGPT+ +RG+DNA+YYR  +GD R
Sbjct:    7 RLQPGSPYPLGATCDGLGVNFAVFSANAERIDLCLFDPSGRREIARMTLPECTDQVFHGYLPLARAGLLYGYRAYGPYEPRRGHRFNHHKLLLDPYARAIAGQVRWSDALFGYRLNSNRADLSFDRRDSAAAMPKAIVTDEAGMLSVPNARSGRASPAVPWPETVIYEAHVRGLTIQREDIRPHERGTFAALAEPAIIEHLVKLGVTTIELLPVHAFLQDRHLLEKGLRNYWGYNTLSFFAPEPRYLSDGSREELRMAVNQLHAAGIEVILDVVYNHTCEGSELGPTLSFRGLDNASYYRLVSGDER 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19218.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y8ZRV1_9SPHN2.170e-11254.37Glycogen debranching protein GlgX n=1 Tax=Sphingom... [more]
UPI0010C93C824.290e-11254.10glycogen debranching protein GlgX n=1 Tax=Rhodolig... [more]
A0A395D0Q2_9HYPH4.560e-11252.324-alpha-glucanotransferase (Fragment) n=1 Tax=Meth... [more]
A0A7C2SQL7_9DELT8.880e-11255.81Glycogen debranching enzyme GlgX n=1 Tax=Deltaprot... [more]
A0A5N7YMC5_9HYPH3.000e-11156.04Glycogen debranching protein GlgX (Fragment) n=1 T... [more]
UPI0013571D5F3.230e-11154.40glycogen debranching protein GlgX n=1 Tax=Geminico... [more]
E3I3Q7_RHOVT8.040e-11157.104-alpha-glucanotransferase n=5 Tax=Rhodomicrobium ... [more]
A0A1Y6CDB1_9HYPH9.740e-11155.56Glycogen operon protein n=2 Tax=Tistlia TaxID=1321... [more]
A0A1Q7BKN5_9PROT2.410e-11056.48Glycogen debranching enzyme GlgX n=1 Tax=Alphaprot... [more]
UPI001BCF87C75.230e-11053.75glycogen debranching protein GlgX n=1 Tax=Chelatoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19218contigP-wetherbeei_contig19218:395..1300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog648757.Rvan_1133
PFAMsAlpha-amylase,CBM_48,Glyco_hydro_77
Model size906
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02438
KEGG ReactionR02111
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.32e-111
EggNOG OGsCOG1523@1|root,COG1640@1|root,COG1523@2|Bacteria,COG1640@2|Bacteria,1MU19@1224|Proteobacteria,2TRVS@28211|Alphaproteobacteria,3N6M1@45401|Hyphomicrobiaceae
EC3.2.1.196
DescriptionCarbohydrate-binding module 48 (Isoamylase N-terminal domain)
Cds size906
COG categoryG
CAZyCBM48,GH13
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.817546-CDS-P-wetherbeei_contig19218:394..13001683186166.817546-CDS-P-wetherbeei_contig19218:394..1300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19218 395..1300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19218.1.1prot_P-wetherbeei_contig19218.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19218 395..1300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19218.1.1

>prot_P-wetherbeei_contig19218.1.1 ID=prot_P-wetherbeei_contig19218.1.1|Name=mRNA_P-wetherbeei_contig19218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MTSRLSGGAPFPLGATPDRRGTNFALASVNAERVELCLFNPAGDKEMERI
RLPERTGDVWHGHLAGIGAGQLYGYRVYGPFDPARGHRFNHHKLLIDPYA
KATDRPFRLAPSLYGHVNGDPRADLSFDTTDSAADMPKGIVVAPSTSAAS
PGPRIPWQDTIIYELHAKGFTKLNGKLPEKLRGTLSGLAQPASLEHLVKL
GITTIELMPLAAFIDERHLPPLGLSNYWGYNPVTFLAPEPRYLANGGANL
RAAIAKIHEAGIDVIVDVVFNHSGESDELGPTICYRGIDNATYYRPKAGD
PR
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mRNA from alignment at P-wetherbeei_contig19218:395..1300+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19218.1.1 ID=mRNA_P-wetherbeei_contig19218.1.1|Name=mRNA_P-wetherbeei_contig19218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig19218:395..1300+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCTCACGATTGTCCGGCGGCGCGCCTTTTCCGCTTGGCGCGACGCC CGACCGGCGCGGCACCAATTTCGCCCTCGCCTCCGTCAATGCCGAGCGCG TCGAGCTGTGCCTGTTCAATCCAGCCGGCGACAAGGAGATGGAGCGCATC CGCCTGCCCGAGCGGACCGGCGATGTCTGGCACGGCCACCTCGCCGGCAT CGGCGCAGGGCAACTCTATGGCTATCGCGTCTATGGGCCGTTCGATCCGG CGCGCGGGCATCGCTTCAATCACCACAAGCTGCTGATCGATCCCTATGCC AAGGCGACCGACCGGCCGTTCCGCCTGGCCCCGTCGCTGTATGGGCATGT CAACGGCGATCCGCGTGCCGATCTCAGCTTCGACACCACCGACAGCGCGG CGGATATGCCGAAGGGCATTGTCGTGGCACCCAGCACATCGGCCGCATCG CCGGGGCCGCGCATTCCGTGGCAAGACACCATCATCTACGAGCTGCACGC CAAGGGCTTCACCAAGCTGAACGGCAAGCTGCCGGAAAAGCTGCGCGGCA CCCTGTCCGGCCTGGCGCAGCCGGCCTCGCTCGAACATCTCGTCAAGCTC GGCATCACCACCATCGAGCTGATGCCGCTGGCCGCCTTCATCGACGAGCG GCACCTGCCGCCGCTGGGCTTGAGCAATTACTGGGGCTACAACCCGGTCA CCTTCCTGGCGCCGGAGCCGCGCTATCTGGCCAATGGCGGCGCCAATCTG CGCGCCGCCATCGCCAAGATCCACGAGGCCGGCATCGACGTCATCGTCGA CGTGGTGTTCAACCACAGCGGCGAGAGCGACGAGCTGGGCCCGACCATCT GTTATCGCGGCATCGACAACGCGACCTACTATCGGCCGAAAGCGGGCGAT CCGCGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19218:395..1300+

>mRNA_P-wetherbeei_contig19218.1.1 ID=mRNA_P-wetherbeei_contig19218.1.1|Name=mRNA_P-wetherbeei_contig19218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig19218:395..1300+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCTCACGATTGTCCGGCGGCGCGCCTTTTCCGCTTGGCGCGACGCC
CGACCGGCGCGGCACCAATTTCGCCCTCGCCTCCGTCAATGCCGAGCGCG
TCGAGCTGTGCCTGTTCAATCCAGCCGGCGACAAGGAGATGGAGCGCATC
CGCCTGCCCGAGCGGACCGGCGATGTCTGGCACGGCCACCTCGCCGGCAT
CGGCGCAGGGCAACTCTATGGCTATCGCGTCTATGGGCCGTTCGATCCGG
CGCGCGGGCATCGCTTCAATCACCACAAGCTGCTGATCGATCCCTATGCC
AAGGCGACCGACCGGCCGTTCCGCCTGGCCCCGTCGCTGTATGGGCATGT
CAACGGCGATCCGCGTGCCGATCTCAGCTTCGACACCACCGACAGCGCGG
CGGATATGCCGAAGGGCATTGTCGTGGCACCCAGCACATCGGCCGCATCG
CCGGGGCCGCGCATTCCGTGGCAAGACACCATCATCTACGAGCTGCACGC
CAAGGGCTTCACCAAGCTGAACGGCAAGCTGCCGGAAAAGCTGCGCGGCA
CCCTGTCCGGCCTGGCGCAGCCGGCCTCGCTCGAACATCTCGTCAAGCTC
GGCATCACCACCATCGAGCTGATGCCGCTGGCCGCCTTCATCGACGAGCG
GCACCTGCCGCCGCTGGGCTTGAGCAATTACTGGGGCTACAACCCGGTCA
CCTTCCTGGCGCCGGAGCCGCGCTATCTGGCCAATGGCGGCGCCAATCTG
CGCGCCGCCATCGCCAAGATCCACGAGGCCGGCATCGACGTCATCGTCGA
CGTGGTGTTCAACCACAGCGGCGAGAGCGACGAGCTGGGCCCGACCATCT
GTTATCGCGGCATCGACAACGCGACCTACTATCGGCCGAAAGCGGGCGAT
CCGCGT
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