mRNA_P-wetherbeei_contig19215.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19215.1.1
Unique NamemRNA_P-wetherbeei_contig19215.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A7C1D2E8_9GAMM (Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1D2E8_9GAMM)

HSP 1 Score: 231 bits (590), Expect = 1.490e-63
Identity = 157/440 (35.68%), Postives = 228/440 (51.82%), Query Frame = 1
Query:    4 PWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAP-LRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPP---APWFVAKLAADVDFTLGDEVSLSAAGLDARLTG--AVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIR--ADLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARAALRLG 1299
            P++P      G LSA ARL  + G+ +   Q    +  L+ +    A +++ +    A   L    L A+ S S A+  R    L    + +   L GE RA L+++RW+E   P+L    G       L G  E P   GELRL  G   +P  GT +  + + A      RL L G+A  G G + + GE   R +G P AEL L G +   V+  + +   +PD+ ++L  + +DL G ++     I L  LP +AV+ SPDEV++D         PP   +PW   ++   V   LGD V LSA GL ARL G  AV  R PR   P R  G   I DG Y+AYGQDL ++RG L+F G  DNP L++RA+R   D +VTAG+ + GT++ P+  +F+EP++ D+E +A+L+TG  L+ AS   AGV+  A    G
Sbjct:  647 PFLPENARLEGQLSAGARLRDEEGL-EVLAQLRTRQAVLQVQGLNGAPESIRIRALAADASLRDGGLDASASLSFAQGGRASAKLTTRPEGETHRLDGEARASLSELRWVEALAPELREVTGRIEADLTLAGTLENPDFHGELRLADGRFQVPNAGTVVEQVALHARARGLDRLILNGEAHSGPGRIVLAGELGLRPNGAPWAELGLSGERFLAVQRREADVLVSPDLALTLEARNIDLTGTLTIPEASIELRELPPQAVSVSPDEVIVDA--------PPVEASPW---QVHTRVTLILGDRVRLSAFGLSARLAGEVAVDDRPPR---PVRAEGEIRIEDGRYKAYGQDLTVERGVLVFQGPADNPGLDIRAVRHVPDYEVTAGIAIGGTLQEPRSRVFSEPAMEDSEAMAFLLTGRPLSGASESDAGVLMTAITSFG 1071          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: UPI000369D4EC (translocation/assembly module TamB domain-containing protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI000369D4EC)

HSP 1 Score: 229 bits (583), Expect = 1.780e-62
Identity = 153/435 (35.17%), Postives = 220/435 (50.57%), Query Frame = 1
Query:    4 PWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAP-LRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRA--DLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARAALRLG 1299
            PW+P      G+LSA+ARL           +A +++G L         Q LP  +      LD   + A  + S  E  R    L    +     L G  RADL ++RWLE  VP +   EG  R    L G   AP   GELRL      +P  G  LT L + A+     RL L G  + G G L + GE      G P AE++L+G +   +R P+ +   +P++++ LA + + + GR++     I L  LP +AV+ S DEV++D    A+DV P  PW V      V  TLG++V LS  GL  RL G V         P R  G   I DG Y+AYGQ+L ++RG L+F G  DNP L++RA+R     DV+AG+ + GT++ P+  +F+ P++ D+E ++YL+TG  L+ AS   A V+A A    G
Sbjct:  838 PWLPENVAVDGSLSAEARLRHDDAGLTAESRAGIDQGELHVLGLDGERQTLPFREVSLEAGLDRGIMDARAALSFLERGRADAALRLTPEGDTHRLSGRARADLQELRWLEVAVPQIRDPEGRLRADLALSGTLAAPDFRGELRLTEAHARIPELGLELTELHLRAAAEGLDRLTLDGGVRSGPGELELAGEAGVTPEGTPWAEMRLQGERFEALRRPEAQVLISPELNMELAARNVHITGRLTVPEAHIELRELPPQAVSVSRDEVIVD----AQDVEP--PWHVRT---SVTVTLGEQVHLSGFGLTGRLAGEVAVEDSPAR-PARVEGEIRIEDGRYRAYGQNLTVERGVLVFQGPADNPGLDIRAVRRVPAYDVSAGLAIGGTLQDPRSRVFSTPAMEDSEAMSYLLTGRPLSGASEADANVLAAAITAFG 1262          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A0F7K3W7_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A0F7K3W7_9GAMM)

HSP 1 Score: 214 bits (544), Expect = 2.500e-57
Identity = 154/434 (35.48%), Postives = 225/434 (51.84%), Query Frame = 1
Query:    4 PWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEW-IRVQGTLAAGLDAQAP--LRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFV--AKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRADLD--VTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARA 1284
            PW+PA     G+L    +L+       G  +  +++GSL   AA      L L D   A +L     RAT      E  I  Q T    L A  P  + G+L+ADL D++ L   +P L+   G    +A L G  + P +DG +RL  G+  LP+ G  L  + ++A      +L L G    G G+L + G+       G    LKL+G  + VVRLP+  A A+PD+DI+L  + L + G +S  R  I L  LP+ AVA S DE++I    G +D  PP P     A+LA  V    G++V  S  GL+ RL G+V      G    +G     + +G Y+AYGQDL I++G L+F+G   NPTL+++A R   D  VTA + ++G +R P+  + ++PSLP+AE LAYLVTG +L     G A ++ +A
Sbjct:  720 PWLPAEVRVEGSLDGQLQLAGPIDALTGEAELSLDQGSLLLDAAEEQPLRLALQDGAMALRLTPQGSRATFRLMTGEGSINAQATTGP-LSATGPVTITGKLKADLPDLQPLGLLLPGLSEIRGQLAAEARLAGDLQQPEIDGFVRLDQGAANLPQLGLELQDITLSARNQGREKLNLEGALTSGGGTLRLQGDLGLDPEQGWPLTLKLQGQDVQVVRLPEAMAYASPDLDITLHQRQLGIKGELSLPRADIQLRELPKNAVAVSEDELII----GEQDAEPPTPPLTVDARLAIKV----GEQVRFSGFGLETRLQGSVALNSREGRTLAQGE--LTLKEGRYRAYGQDLTIEQGRLLFNGPPQNPTLDIKATRLSKDESVTAILNLSGNLRAPQVEVSSDPSLPEAEALAYLVTGQSLDTEGAGGATILRQA 1142          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A1V3NCR9_9GAMM (Uncharacterized protein n=2 Tax=Thioalkalivibrio denitrificans TaxID=108003 RepID=A0A1V3NCR9_9GAMM)

HSP 1 Score: 209 bits (533), Expect = 7.700e-56
Identity = 146/436 (33.49%), Postives = 217/436 (49.77%), Query Frame = 1
Query:    7 WVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAP---LRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRA--DLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARAALRLG 1299
            W+P      G LSAD RL   A    G  +A V+ G+LR        +++P  D +   +     +  T   S  E  R Q T    L  +     L G  RADL ++RWLE   P +    G  +    + G  E P   G++RL  G  L+P  G  LT + +  +     RL L G  + G G+L ++GE      G P A + L G +   VR P+ +   +PD+ + L  + + L GR++     I L  LP +AV+ S DEV++D      D  P  PW   ++ + V   LGD+V LS  GL ARL G V         P R  G   + DG Y+AYGQ+L ++RG L+F G  DNP L++RA+R     +VTAG+ + GT++ P+  +F+ P++ D+E +++L+TG  L+ AS   A V+A A    G
Sbjct:  842 WLPDNVTADGVLSADVRLRHDAQGLTGQARARVDEGTLRVLTPDGEHEDIPFRDVRVDAEKSNGVIETTAGLSFLE--RGQATARLLLTPEGDTHRLAGSARADLEELRWLEVAAPQVRDLTGRLQANLDVSGTLETPDFRGDVRLSEGRALIPEAGIELTDMHLHGAAEGLDRLTLSGGVRSGPGALELSGEMGLTPEGAPWARMALEGDRFRAVRRPEAQVLVSPDLTMELEGRLIRLDGRLTIPEANIELRELPPQAVSVSRDEVIVDA---EADDEP--PW---QVYSTVTVILGDQVRLSGFGLTARLAGEVAVEDSPAR-PTRVEGEIRVEDGRYRAYGQNLIVERGVLVFQGPADNPGLDIRAVRRVPAYNVTAGLAIGGTLQDPRSRVFSTPAMEDSEAMSFLLTGRPLSGASEADANVLATAIAAFG 1266          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A369C0P5_9GAMM (Autotransporter secretion inner membrane protein TamB n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C0P5_9GAMM)

HSP 1 Score: 208 bits (530), Expect = 1.660e-55
Identity = 147/422 (34.83%), Postives = 211/422 (50.00%), Query Frame = 1
Query:    1 GPWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQG--TLAAGLDA--QAPLRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRADLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANAS 1254
            GPW+P G    G    + + +      +   +  V    +RYR        + L     +  L+G+   A L A+LA    V+   TLA G     +A L GE + +L D+  +  F P L    G  R      G   AP L GE  L      +P  G R++  E+ A G     +AL G+A+ G G++++ G  +  A  G    L++RG     V LP+  A   P + + L  Q L ++G V+    +I L  LP  AVA S D VV+D         PPA      L AD+   LG++V+ +  GL ARL G++  R+  G+AP RG G   I++G Y+AYGQDL I RG LIF G IDNP L++RA R+  D+ AG++ TGT +  +  LF+ P + DAEVL+YL+ G  L  AS
Sbjct:  635 GPWLPEGVAVEGTAGGEVQAAGLGPAVKADLRLAVPETVVRYRDPDGKPAAVTLTGLNLSGALEGSRAEARLQAALAGGGGVESRLTLARGAAGWGEARLGGEAQLELPDLELVAAFAPGLERPRGQVRANLAFAGTVAAPRLQGEAALTGFEAAIPPLGIRVSEGELRARGDEQGVIALTGRARSGPGAVSLDGRVVLDAQQGWPLRLQVRGKDFEAVNLPEARALVDPALALDLQGQRLQVSGEVAVPEARITLRELPTSAVAVSDDVVVVDAES------PPAERSPLALFADLTVRLGEKVTFTGFGLGARLGGSLRVREAPGQAP-RGEGELRILEGRYKAYGQDLTIDRGRLIFAGPIDNPALDLRATRSVGDIVAGLQATGTAQASRVTLFSTPPMEDAEVLSYLLLGRPLNQAS 1049          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A450Y6U4_9GAMM (Autotransporter secretion inner membrane protein TamB n=2 Tax=Candidatus Kentron sp. SD TaxID=2126332 RepID=A0A450Y6U4_9GAMM)

HSP 1 Score: 207 bits (528), Expect = 3.030e-55
Identity = 143/386 (37.05%), Postives = 205/386 (53.11%), Query Frame = 1
Query:  106 ERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLD-AQAPLRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIR--ADLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANAS 1254
            E G+L YR            DA+         LRA +   +AE   V+G L      AQ PLRG L+A L D+  L  FVP     +G+  L     G+   P+L G+  L  G+  LP  G RL  + + A    D  L +RGQA  G G +T  G+         R EL +RG    V+RLP+ +  A+P++ +    +G+ + G +S  + +I +  LP+  VATS DE++I G +GA +     P    +  A V   LGDEVS S  G++A LTG++       E P   +G   + DG YQAYGQ+L ++ G LIF G +DNP LE RA R  AD +VT GV +TGT++  +  L ++P +PDA++L+YL+TG  +ANAS
Sbjct:  659 EAGALIYRMPDREPLETTFRDARLTASYAENRLRADVRCQVAEQGLVEGKLRIDTTIAQYPLRGTLQAKLPDLALLSGFVPQADRIQGALALSFTASGSLRTPILRGQGTLTEGAADLPGAGVRLHDISLHAEAQGDQSLKVRGQAMSGPGRITFIGDIRQPFGALSRLELSVRGDAFQVLRLPEAQVLASPNLRVVSDREGVRVDGEISIPKARIEMDELPKTGVATSEDEIII-GKKGA-ETPKNTPGHAVR--AKVLVVLGDEVSFSGFGIEAGLTGSLTI-DGYPEKPPISNGVIILKDGRYQAYGQNLTVEYGRLIFSGPVDNPGLEARAARKVADANVTVGVDITGTLKKSRMDLSSDPIMPDADILSYLLTGRPIANAS 1039          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: B8GL27_THISH (Uncharacterized protein n=2 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GL27_THISH)

HSP 1 Score: 202 bits (514), Expect = 2.510e-53
Identity = 135/387 (34.88%), Postives = 202/387 (52.20%), Query Frame = 1
Query:  148 QNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAP-LRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRA--DLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARAALRLG 1299
            + +P  D   A  L    L A+ S +  E  +    L A  +     L G+ RADL ++RWLE F P +    G  +    L G    P   G + L  G +L+P  G  LT L + A+     RL+L G+ + G G L + GE     +G P A L L G +   +RLP+ +   +PD+ ++LA + + L G ++     I L  LPE+AV+ S DEV++D    A   L        ++ + V  TLG+ VSLS  GL ARL G +         P R  G   I+DG Y+AYGQ+L ++RG L+F G  DNP L++RA+R     DVTAG+ + GT++ P+  +F+ P++ D+E +++L+TG  L+ AS   A V+A A    G
Sbjct:  886 ETIPFRDLNLAASLSDGRLDASTSLAFLEAGQASARLTAIPERGTHRLDGQARADLTELRWLEIFAPQVRDPRGRLQADLALTGTLADPEFRGRVNLAEGRMLIPDAGLELTDLNLQAAADGLDRLSLDGRVRSGPGELRLGGELGLADTGEPWANLTLAGERFQALRLPEAQVFISPDLAMALAGREIRLTGSLAVPEASIELRELPEQAVSVSRDEVIVDADAPAEPPL--------EIHSRVSVTLGERVSLSGFGLSARLEGQLDVEDSPAR-PTRVEGEIRILDGRYRAYGQNLIVERGVLVFQGPADNPGLDIRAVRRVPAHDVTAGLAIGGTLQDPRSRVFSTPAMEDSEAMSFLLTGRPLSGASESDANVLAAAITSFG 1263          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A557SKI1_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A557SKI1_9GAMM)

HSP 1 Score: 201 bits (512), Expect = 4.410e-53
Identity = 141/433 (32.56%), Postives = 215/433 (49.65%), Query Frame = 1
Query:    7 WVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAA-----GLDAQAPLRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRADLD--VTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARA 1284
            W+P      GNL  D +L+      QG  +  + +G L   A       L L D   + ++     +A L     E    Q TL+A       D   PL G L A++ D++ +   VP L    G    +A L G    P + G L+L  GS  LP+ G  L  +++TA      RL L+G+   G G L + G+ + +A  G    L L+G  + VVRLP+ EA A PD++I L    L L G +   +  I L  LP+ AV+ S DE+++   +      P        + A+V   +G++V  +  GL+ RL G V  R  +G    +G     + +G Y+AYGQDL I +G L+F+G  +NP L+++A R  LD  VTA + V+G +RVP+  + + P LP+ E L+YL+TG  L+   PG A ++ +A
Sbjct:  723 WLPQEVAVEGNLDGDFQLAGPLSALQGEAKLLLAQGVLLLEATEEQPVRLALQDGLLSLRMSPQENQAELQLQAGEG---QVTLSARTGPLSSDRPIPLAGRLNAEIPDLKPIGLLVPGLTDIRGKLETEATLGGHLLQPEIQGFLKLSEGSANLPQLGLELREIQLTARNEGTERLLLQGELTSGGGPLKLNGDLLLQAEQGWPLALTLKGENVQVVRLPEAEAYATPDMEIKLKKDLLTLKGTLLLPKATIQLRELPKSAVSLSDDEIIVGRIEQTAKSSP------LVIDAEVSVEVGNQVQFNGFGLNTRLEGQVDLRSKQGRNQAQGE--LALKEGRYKAYGQDLTITQGRLLFNGPPENPNLDIKATRLSLDRSVTATLGVSGNLRVPQVQVSSTPVLPEEEALSYLITGQGLSAEGPGKAALLRQA 1144          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: UPI00048CAB00 (translocation/assembly module TamB domain-containing protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=UPI00048CAB00)

HSP 1 Score: 199 bits (506), Expect = 2.740e-52
Identity = 142/433 (32.79%), Postives = 220/433 (50.81%), Query Frame = 1
Query:    4 PWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAPL--RGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTG--AVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRADLD--VTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARA 1284
            PW+P      G+     +L+       G  Q  + RGSL   A       L L D     Q+     +A       E         A   A+ P+   G L+AD+ D++ L   +P L+   G+   +A + G  + P +DG +RL  G+  +P+ G  L  + ++A      +L L GQ   G G+L + G+    A       LKL+G  + VVRLP+  A A+PD++I+L  Q L + G +   R  I L  LP+ AV+ S DEV++    G  +  PP+P       A V   +G++V  S  GL+ RL G  AV+ R+ R  A G+      + +G Y+AYGQ+L I++G LIF+G+  NPTL+++A R   D  VTA + ++G +R P+  + ++P+LP+ E LAYLVTG +L    PG A ++ +A
Sbjct:  721 PWLPEEIRVEGSFDGKLQLAGPIEALTGEAQLTLPRGSLLLEATEEQPLRLALQDGMLNLQMTPQGNQAAFKLMAGEGSITAQARTAAFSAKGPVAVNGTLKADIPDLQPLGLLLPGLSDIRGNLAAEANVAGDLQQPEIDGFIRLDQGAANVPQLGLALENIALSARNQGKEKLTLEGQLTSGGGTLRLQGDLQLDAEQAWPLALKLQGKDVQVVRLPEAVAYASPDMNITLRKQQLGIEGELKLPRADIELHELPKSAVSVSEDEVIV----GKTESQPPSPPLAIN--AQVAVQVGEQVRFSGFGLETRLQGDVAVNSREGRTLAQGQ----LVLREGRYRAYGQNLTIEQGRLIFNGSPQNPTLDIKATRLSKDQSVTAILNLSGNLRAPQVEVSSDPTLPEEEALAYLVTGQSLDTEGPGGATMLRQA 1143          
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Match: A0A1I4S567_ECTMO (Autotransporter secretion inner membrane protein TamB n=2 Tax=Ectothiorhodospira mobilis TaxID=195064 RepID=A0A1I4S567_ECTMO)

HSP 1 Score: 198 bits (504), Expect = 4.880e-52
Identity = 146/439 (33.26%), Postives = 217/439 (49.43%), Query Frame = 1
Query:    7 WVPAGGLRRGNLSADARLSQQAGV---WQGAGQAHVERGSLRYRAAGH--AEQNLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGL------DAQAPLRGELRADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSLLLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGGPRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQIHLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDEVSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQRGALIFDGAIDNPTLEVRAIRA--DLDVTAGVRVTGTMRVPKFALFAEPSLPDAEVLAYLVTGHALANASPGAAGVIARA 1284
            W+P      G +   ARL    G    W    +AH+  G  R R        Q +P  DA+A  +L   +L A+L   +A     QG + A L      D    L G+ R  L D+ W++  +P +    G  +    + G+  AP LDG L L  G + LP  G  L  + +        RL L G+ + G GSLT+ G+      G P   L++RG     +R PD++A  +PD++I+   + + + G V+  R  + L  LP +AV  S DEV++  A+        AP  V    A V  TLG+EV +   GLDARL G +  ++  G  P R  G   I +G Y+AYGQDL ++RG L+F G  +NP L++RA+R     +VT G+ + GT+  P+  +F++P + + E LA+LVTG  L+ A  G    IA A
Sbjct:  663 WLPPNLGLEGRVDGGARLRLDPGPTPKWNL--EAHLTPGDGRLRILDEDGTLQTVPFRDARADLRLQDRDLEASLGLDIA----TQGHIRARLRGRGREDGDLALEGQARLTLEDLTWMDPLIPQVKDLRGRVQGDLDMGGSLRAPRLDGRLTLSEGVVTLPEAGITLKDMRLDLHNEGRERLRLTGRLRSGEGSLTLEGDVQRADDGPPPVRLQVRGEDFLALRRPDVQAVISPDLNITAIGRRVIVTGDVAVPRALLELAELPPQAVEVSEDEVIVQEAREESG----APLLVV---ARVGVTLGEEVRIRGYGLDARLGGELQVQQSPG-LPTRLLGQIRIQEGRYKAYGQDLTVERGLLLFQGPPENPGLDLRAVRRIPAHEVTVGLEMGGTLEHPRSRVFSDPPMEETEALAFLVTGRPLSGAGEGDGNAIASA 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1D2E8_9GAMM1.490e-6335.68Uncharacterized protein n=1 Tax=Thioalkalivibrio s... [more]
UPI000369D4EC1.780e-6235.17translocation/assembly module TamB domain-containi... [more]
A0A0F7K3W7_9GAMM2.500e-5735.48Uncharacterized protein n=1 Tax=Sedimenticola thio... [more]
A0A1V3NCR9_9GAMM7.700e-5633.49Uncharacterized protein n=2 Tax=Thioalkalivibrio d... [more]
A0A369C0P5_9GAMM1.660e-5534.83Autotransporter secretion inner membrane protein T... [more]
A0A450Y6U4_9GAMM3.030e-5537.05Autotransporter secretion inner membrane protein T... [more]
B8GL27_THISH2.510e-5334.88Uncharacterized protein n=2 Tax=Thioalkalivibrio T... [more]
A0A557SKI1_9GAMM4.410e-5332.56Uncharacterized protein n=1 Tax=Sedimenticola sele... [more]
UPI00048CAB002.740e-5232.79translocation/assembly module TamB domain-containi... [more]
A0A1I4S567_ECTMO4.880e-5233.26Autotransporter secretion inner membrane protein T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19215contigP-wetherbeei_contig19215:2..1300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog713586.KB900536_gene2569
PFAMsTamB
Model size1299
Max annot lvl135613|Chromatiales
KEGG koko:K09800
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.91e-63
EggNOG OGsCOG2911@1|root,COG2911@2|Bacteria,1MUVD@1224|Proteobacteria,1RMMF@1236|Gammaproteobacteria,1WWU1@135613|Chromatiales
DescriptionTamB, inner membrane protein subunit of TAM complex
Cds size1299
COG categoryS
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.7441106-CDS-P-wetherbeei_contig19215:1..13001683186166.7441106-CDS-P-wetherbeei_contig19215:1..1300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19215 2..1300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19215.1.1prot_P-wetherbeei_contig19215.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19215 2..1300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19215.1.1

>prot_P-wetherbeei_contig19215.1.1 ID=prot_P-wetherbeei_contig19215.1.1|Name=mRNA_P-wetherbeei_contig19215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp
GPWVPAGGLRRGNLSADARLSQQAGVWQGAGQAHVERGSLRYRAAGHAEQ
NLPLHDAQAAFQLDGTNLRATLSASLAEWIRVQGTLAAGLDAQAPLRGEL
RADLADIRWLEEFVPDLAGSEGSARLKAMLRGAREAPVLDGELRLLSGSL
LLPRFGTRLTALEVTASGAPDSRLALRGQAQVGAGSLTMTGEFIPRASGG
PRAELKLRGAQLAVVRLPDIEADAAPDIDISLAPQGLDLAGRVSWSRVQI
HLPSLPERAVATSPDEVVIDGAQGARDVLPPAPWFVAKLAADVDFTLGDE
VSLSAAGLDARLTGAVHWRKPRGEAPGRGHGGFNIVDGHYQAYGQDLKIQ
RGALIFDGAIDNPTLEVRAIRADLDVTAGVRVTGTMRVPKFALFAEPSLP
DAEVLAYLVTGHALANASPGAAGVIARAALRLG
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mRNA from alignment at P-wetherbeei_contig19215:2..1300+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19215.1.1 ID=mRNA_P-wetherbeei_contig19215.1.1|Name=mRNA_P-wetherbeei_contig19215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig19215:2..1300+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCCGTGGGTGCCGGCCGGTGGGCTACGGCGCGGCAATTTGAGCGCTGA CGCGCGGCTCAGCCAGCAAGCCGGTGTGTGGCAGGGCGCAGGCCAGGCCC ATGTCGAACGCGGCAGCCTGCGCTATCGCGCGGCCGGTCATGCCGAGCAG AACCTGCCGCTGCATGATGCGCAGGCTGCGTTTCAGCTCGATGGCACAAA TCTGCGCGCCACGCTCAGCGCCAGTCTCGCAGAATGGATACGCGTGCAAG GCACGCTGGCTGCCGGTCTCGACGCGCAAGCGCCGTTGCGCGGCGAGTTG CGGGCCGACCTGGCGGATATCCGCTGGCTGGAGGAGTTTGTGCCGGACCT GGCTGGCAGTGAAGGCAGCGCGCGCCTTAAGGCCATGCTGCGCGGTGCAC GCGAAGCCCCCGTGCTCGACGGTGAACTGCGCTTGTTGTCGGGCAGTCTG TTGCTGCCACGTTTCGGCACGCGCTTGACGGCGCTTGAAGTTACGGCCAG TGGTGCGCCGGACAGCCGCCTCGCACTGCGCGGGCAGGCGCAGGTCGGCG CAGGATCCTTGACCATGACCGGTGAATTTATTCCACGTGCCAGCGGCGGG CCGCGTGCAGAACTCAAACTGCGCGGCGCGCAATTGGCCGTGGTGCGCCT GCCCGATATCGAGGCCGACGCCGCGCCCGACATCGACATCAGCCTCGCGC CGCAGGGCCTCGACCTCGCTGGCCGAGTGAGCTGGTCGCGGGTGCAGATC CATCTGCCGAGCTTGCCGGAGCGCGCGGTGGCGACCTCGCCCGACGAAGT CGTGATCGACGGCGCGCAAGGCGCGCGCGACGTGCTGCCACCAGCGCCTT GGTTCGTCGCCAAGCTCGCCGCCGATGTGGATTTCACGCTGGGCGACGAG GTATCGCTGTCGGCGGCCGGACTCGACGCGCGGCTGACCGGCGCGGTGCA CTGGCGCAAGCCGCGCGGTGAAGCGCCCGGTCGCGGCCATGGCGGCTTCA ATATCGTCGATGGGCACTACCAGGCCTATGGCCAGGATTTGAAAATTCAG CGTGGCGCGCTGATCTTCGACGGCGCCATCGATAACCCCACGCTTGAGGT GCGCGCAATACGCGCGGACCTCGATGTGACGGCGGGTGTGCGCGTGACCG GCACGATGCGCGTGCCGAAGTTTGCGCTGTTCGCTGAACCCAGCCTGCCC GATGCGGAAGTGCTGGCCTATCTCGTCACCGGCCACGCACTCGCCAACGC TTCGCCGGGCGCAGCCGGTGTGATCGCGCGCGCCGCCTTGCGTCTCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19215:2..1300+

>mRNA_P-wetherbeei_contig19215.1.1 ID=mRNA_P-wetherbeei_contig19215.1.1|Name=mRNA_P-wetherbeei_contig19215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig19215:2..1300+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCCGTGGGTGCCGGCCGGTGGGCTACGGCGCGGCAATTTGAGCGCTGA
CGCGCGGCTCAGCCAGCAAGCCGGTGTGTGGCAGGGCGCAGGCCAGGCCC
ATGTCGAACGCGGCAGCCTGCGCTATCGCGCGGCCGGTCATGCCGAGCAG
AACCTGCCGCTGCATGATGCGCAGGCTGCGTTTCAGCTCGATGGCACAAA
TCTGCGCGCCACGCTCAGCGCCAGTCTCGCAGAATGGATACGCGTGCAAG
GCACGCTGGCTGCCGGTCTCGACGCGCAAGCGCCGTTGCGCGGCGAGTTG
CGGGCCGACCTGGCGGATATCCGCTGGCTGGAGGAGTTTGTGCCGGACCT
GGCTGGCAGTGAAGGCAGCGCGCGCCTTAAGGCCATGCTGCGCGGTGCAC
GCGAAGCCCCCGTGCTCGACGGTGAACTGCGCTTGTTGTCGGGCAGTCTG
TTGCTGCCACGTTTCGGCACGCGCTTGACGGCGCTTGAAGTTACGGCCAG
TGGTGCGCCGGACAGCCGCCTCGCACTGCGCGGGCAGGCGCAGGTCGGCG
CAGGATCCTTGACCATGACCGGTGAATTTATTCCACGTGCCAGCGGCGGG
CCGCGTGCAGAACTCAAACTGCGCGGCGCGCAATTGGCCGTGGTGCGCCT
GCCCGATATCGAGGCCGACGCCGCGCCCGACATCGACATCAGCCTCGCGC
CGCAGGGCCTCGACCTCGCTGGCCGAGTGAGCTGGTCGCGGGTGCAGATC
CATCTGCCGAGCTTGCCGGAGCGCGCGGTGGCGACCTCGCCCGACGAAGT
CGTGATCGACGGCGCGCAAGGCGCGCGCGACGTGCTGCCACCAGCGCCTT
GGTTCGTCGCCAAGCTCGCCGCCGATGTGGATTTCACGCTGGGCGACGAG
GTATCGCTGTCGGCGGCCGGACTCGACGCGCGGCTGACCGGCGCGGTGCA
CTGGCGCAAGCCGCGCGGTGAAGCGCCCGGTCGCGGCCATGGCGGCTTCA
ATATCGTCGATGGGCACTACCAGGCCTATGGCCAGGATTTGAAAATTCAG
CGTGGCGCGCTGATCTTCGACGGCGCCATCGATAACCCCACGCTTGAGGT
GCGCGCAATACGCGCGGACCTCGATGTGACGGCGGGTGTGCGCGTGACCG
GCACGATGCGCGTGCCGAAGTTTGCGCTGTTCGCTGAACCCAGCCTGCCC
GATGCGGAAGTGCTGGCCTATCTCGTCACCGGCCACGCACTCGCCAACGC
TTCGCCGGGCGCAGCCGGTGTGATCGCGCGCGCCGCCTTGCGTCTCGGC
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