mRNA_P-wetherbeei_contig19214.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: UPI000F653194 (type IV pilus modification protein PilV n=1 Tax=Methylomicrobium sp. wino1 TaxID=2049332 RepID=UPI000F653194) HSP 1 Score: 104 bits (260), Expect = 3.740e-25 Identity = 70/185 (37.84%), Postives = 88/185 (47.57%), Query Frame = 1
Query: 1 MRRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGAWACDNLGDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
M + GFTL+E+LIA+V+ +IGLLG+AG+Q G+R + R+ A MAD MR N + G YN A T A YD+ WN + AD LP G G+ C DST DG S A ACD G YA+KV W + G D QRFVMT+ P
Sbjct: 1 MFKKNGFTLLEVLIAMVVLAIGLLGLAGIQAIGLRNNQSAYHRSQATQLAYDMADRMRVNRVALTNGEYNNGAA-----TANDCEANSCTPAQMAGYDIAQWN--------TALADQLPGGVGVACIDSTSEDGTSAAPACDGNGTTYAVKVWWDDNRSGASD-------------QRFVMTLRP 159
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A177MLW6_METMH (Type IV pilus modification protein PilV n=6 Tax=Methylomonas TaxID=416 RepID=A0A177MLW6_METMH) HSP 1 Score: 102 bits (254), Expect = 2.730e-24 Identity = 71/186 (38.17%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 1 MRRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGES-GAWACDNLGDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
M+ A GFTL+E+LIAVVI ++GLLG+AGLQ +R + R+ A +AD +RAN G D + T A YDLK WN S + S LP G+G+VC+D TP DG S A CD +G+ YA+K+ W + D G A TQRFVM+ P
Sbjct: 1 MKTANGFTLIEVLIAVVILALGLLGLAGLQSTSLRNNQSAYFRSQATLLAYDIADRVRANSVG---------DYNNQGETNNDCVANTCTPAQMAGYDLKQWN-----SQLSSQ---LPSGEGVVCKDKTPGDGNSKSAHNCDGIGEAYAVKIWWDD-----DHDGAA--------TQRFVMSFQP 156
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: UPI0003B4621C (type IV pilus modification protein PilV n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B4621C) HSP 1 Score: 102 bits (254), Expect = 4.610e-24 Identity = 70/194 (36.08%), Postives = 96/194 (49.48%), Query Frame = 1
Query: 1 MRRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDG---------ESGAWACDNLGDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
MRR GFTL+EILIAV++ +IGLLG+AGLQ G+ H + LRT A M D +RAN G + YN A +D+ W +D++ Q ALPQ G+VC DS+P+DG E+ +ACDN G+ YA+K+ W D+ +GN + +RFV P
Sbjct: 1 MRREAGFTLIEILIAVLVLAIGLLGLAGLQTTGLHSNHSANLRTQATLLAYDMIDRIRANHDGYEGTFYNNPTPTDRSCVWDGSAPSACTPQQMAEHDIWEW----KDAMAQ----ALPQATGVVCLDSSPDDGGDANSNGTVEASEYACDNSGNRYAVKLWWV------DEYDDSGNP----VIKRFVTVFQP 176
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: G2DBF0_9GAMM (Type IV pilus modification protein PilV n=3 Tax=sulfur-oxidizing symbionts TaxID=32036 RepID=G2DBF0_9GAMM) HSP 1 Score: 101 bits (252), Expect = 9.650e-24 Identity = 71/187 (37.97%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 4 RRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGA-WACDNLGD--IYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
RR +GFTL+E+L+ +VI SIGLLG+AGLQ ++ G T A AD +RANP GV G Y++ AD D A YD+ W + + + Q LPQG G++C DSTP+DG S A ACD L +YAIK+ W D A N T +R+V++++P
Sbjct: 10 RRQRGFTLMEVLVTMVILSIGLLGVAGLQFRSLQGNVGGMEGTLATLMALDAADRLRANPAGVSAGSYDLAVADGSDPNCITSTCTAAQV---AQYDIWQW---RTERLSQ-----LPQGQGVICLDSTPDDGASAAEHACDGLNPNGVYAIKLWW-------DHDKDASLANDATPLRRYVLSLIP 178
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A2T2UGW5_9PROT (Type IV pilus modification protein PilV n=1 Tax=Proteobacteria bacterium SW_6_67_9 TaxID=1919227 RepID=A0A2T2UGW5_9PROT) HSP 1 Score: 101 bits (251), Expect = 1.430e-23 Identity = 67/186 (36.02%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 1 MRRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTP-NDGESGAWACDNLGDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
M RA GFTL+E++IAV I IGLLG+AGLQ S +R+ A + +AD MRANP GVD G Y++ A P A +DL+ W ++ + A P +VC D P +DG + CD G+ Y IK+ W ++ GD AG+ + DT +RFV + P
Sbjct: 1 MARAHGFTLIEVMIAVFILGIGLLGVAGLQSVSSSMNQQSYMRSQATLLADDIADRMRANPLGVDNGDYDMGAAATPTLDTNCNTTSGCGTTAMAQHDLQQWVDTVDEKLPAPPAADTPADRAVVCIDGPPRDDGAPASPDCDGTGNTYVIKIWWLDKA--GDT--SAGSPHGDT--ERFVTELRP 180
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: UPI0003B5A78F (type IV pilus modification protein PilV n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B5A78F) HSP 1 Score: 100 bits (248), Expect = 2.800e-23 Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 16 GFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGAWACDNLGDIYAIKVQWQ 465
GFTL+E+++ +++ S+G LG AGLQV +F+H + L T A+ M++ MRANP G Y++ A A D+ W +S ++S LPQG +VC DSTP+DG + ACD +GD YA+KV W+
Sbjct: 9 GFTLIEVMVTIIVISLGALGAAGLQVKAQQFSHNAYLNTQAILLAHDMSERMRANPAGTQARQYHLPTATYH---ADCFTITGCDPSDMAQSDMYQWTGDHPNSGIRS----LPQGSAVVCIDSTPDDGSQTSAACDGIGDSYAVKVWWR 151
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A496WWX7_9GAMM (Type IV pilus modification protein PilV n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496WWX7_9GAMM) HSP 1 Score: 99.4 bits (246), Expect = 5.010e-23 Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 1
Query: 4 RRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGAWACDNLGDIYAIKVQWQERTVG 480
+ +GFTL+E+LIAV++ SIGLLG+AGLQ+ G+R H + LR A M D +RANP G+ YN + +T A +++ W + +ALP GD ++C D +P DG S A AC G IYA+KV W + G
Sbjct: 4 KSNKGFTLLEVLIAVLVLSIGLLGLAGLQLTGLRNNHSANLRGQATQFAYDMVDQVRANPVGLAAASYNSPTSA---STATCLTTEGCTPAQLAQHNMFEW--------LADITNALPDGDAIICLDESPEDGTSAAKACSGGGTIYAVKVWWTDDRSG 151
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A3N5GA52_9BURK (Type IV pilus modification protein PilV n=2 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5GA52_9BURK) HSP 1 Score: 98.6 bits (244), Expect = 1.050e-22 Identity = 71/184 (38.59%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 7 RAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGAWACDNLGDI-YAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVMTVVP 555
+ GF+L+E LIA+++ +I LL + GLQ+ +R T GS LRT A Q +AD RAN G Y A +A DL WN QSNA LP G G+VC DSTPNDG GA ACDN+ D A+K+ W D ++G+ N QRFV +V P
Sbjct: 7 QQAGFSLIESLIAMLVIAIALLAMGGLQLNSLRSTGGSMLRTIATQQAYDIADRARANLPAYRAGAYAGTGA-----IHAACFAAGCSPQQQAEMDLYLWN--------QSNASMLPSGQGVVCIDSTPNDGTPGAPACDNVADANLAVKIWW--------DDDRSGSAN-----QRFVQSVRP 164
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A661CVT6_9GAMM (Type IV pilus modification protein PilV n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CVT6_9GAMM) HSP 1 Score: 99.0 bits (245), Expect = 1.240e-22 Identity = 70/188 (37.23%), Postives = 95/188 (50.53%), Query Frame = 1
Query: 4 RRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRAAYDLKTWNYPQEDSIVQSNADALPQGDGMVCRDSTPNDGESGAWACDNLGDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQ----RFVMTVVP 555
+R+ GFT++E+L+++VI SIGLLGIAG+Q+ ++ + RT AV +AD MRAN GV G Y+ +A++ AA DL W D + + L QG G+ C DSTP+DG CD +G IYAIK W +R D A N + Q RFVMT P
Sbjct: 7 KRSAGFTIIEVLVSLVILSIGLLGIAGMQINSLKNNQSAYYRTQAVHLAYELADKMRANTAGVKNGSYD--NANLLQNNNCENNTGCNSSAM-AANDLYQWLSINADHSIPNT---LLQGTGVACIDSTPDDGCIVNQHCDGIGTIYAIKTFWLDRL----DNVIAANADCSNFQQSNEVRFVMTFAP 184
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Match: A0A0Q9YX44_9COXI (Uncharacterized protein n=1 Tax=Candidatus Berkiella aquae TaxID=295108 RepID=A0A0Q9YX44_9COXI) HSP 1 Score: 99.4 bits (246), Expect = 1.360e-22 Identity = 73/198 (36.87%), Postives = 92/198 (46.46%), Query Frame = 1
Query: 7 RAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVESMADLMRANPFGVDRGLYNVKDADIPDTTXXXXXXXXXXXXXRA----------AYDLKTW--NYPQEDSIVQSNAD--ALPQGDGMVCRDSTPNDGESGAWACDNL-----GDIYAIKVQWQERTVGGDDVGKAGNTNTDTLTQRFVM 543
+ GFTL+E+LIA+V+FSIGLLG+A LQV G+R H S LRT A Q MAD MR N G+ + + T A A+D W N + S A ALP G G+VC DSTPNDG CDN+ I+AIK+ W ER + N+ T R+VM
Sbjct: 11 KIAGFTLLEVLIAIVVFSIGLLGLASLQVMGLRLNHDSLLRTVATIQANDMADRMRTNVAATSLGVTSPYNNPSKSATGNPNCLGKDSSGNNANVQCTAAQMAAHDFYEWYANLGGSSATGWSPATPAALPSGTGVVCIDSTPNDGTPSNPGCDNVVAIAGKPIFAIKIWWVERV----------DANSPGTTHRYVM 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19214.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19214.2.1 >prot_P-wetherbeei_contig19214.2.1 ID=prot_P-wetherbeei_contig19214.2.1|Name=mRNA_P-wetherbeei_contig19214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MRRAQGFTLVEILIAVVIFSIGLLGIAGLQVAGMRFTHGSQLRTTAVSQVback to top mRNA from alignment at P-wetherbeei_contig19214:441..1016- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19214.2.1 ID=mRNA_P-wetherbeei_contig19214.2.1|Name=mRNA_P-wetherbeei_contig19214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig19214:441..1016- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19214:441..1016- >mRNA_P-wetherbeei_contig19214.2.1 ID=mRNA_P-wetherbeei_contig19214.2.1|Name=mRNA_P-wetherbeei_contig19214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig19214:441..1016- (Phaeothamnion wetherbeei SAG_119_79)back to top |