mRNA_P-wetherbeei_contig19208.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19208.2.1
Unique NamemRNA_P-wetherbeei_contig19208.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7Z9PVP0_9BACT (RHS repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVP0_9BACT)

HSP 1 Score: 205 bits (521), Expect = 7.410e-59
Identity = 138/368 (37.50%), Postives = 197/368 (53.53%), Query Frame = 1
Query:   10 DARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYTTD-SDGYATMTVTETDLINTS-SPAKITVTTYDPRQNVLKTVD--------PLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETES-PLNPKHRNLVNQIIRPSILVGGVATNYS-TYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFS-NGVSNLGNLTKITSPSGPNGAPA-REVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINAT-QEQMRVRYEYDSFDRVTKL 1068
            D RG V+ ++ Y    D    +E  +SY  T++ YVY  D S     + V + DL  T+  P + T T YDP  N +   D        P+ N+    Y D  +P+L+T   DPNL   DY YD+ GNV    D   N T   YA   +S P+NPKHRNLV  I RP + V GV T Y  T L YDANGN++ + DA+++     +  DG + ++ DR G+ + F Y   + +GVS+  NL ++  P G   A   R     YD YDN+ +VT+ALGH ++  +D   R    TDA GK         LLD V LP N GSSS+ R+T  +YD+  R++QV   +  T  +++RV+Y+Y SF ++ +L
Sbjct:    6 DPRGIVSNRFFY----DSFNRLEREVSYDETEIEYVYGFDPSSELDFVEVYQRDLAVTNPEPDRYTYTLYDPFGNPILVADLVDDSGPTPVFNVTQMFYNDPNSPFLMTARLDPNLTIVDYEYDANGNVTKTIDKDGNETLFAYADTVDSSPINPKHRNLVRLITRPDVTVDGVVTTYDDTELQYDANGNVSNIIDARSKVTTMTYTSDGLVETIQDRRGNTSEFVYEGTAFDGVSSR-NLLQVKVPKGLVPADGFRTATMTYDAYDNVATVTNALGHQVTSLFDDLDRPDTVTDARGKVTSFFYQDDLLDEVHLPANNGSSSSVRKTSMSYDNSSRLIQVDRDVATTGPQELRVKYQYSSFSQLKEL 368          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7Z9PQQ4_9BACT (RHS repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PQQ4_9BACT)

HSP 1 Score: 167 bits (424), Expect = 6.790e-42
Identity = 132/404 (32.67%), Postives = 185/404 (45.79%), Query Frame = 1
Query:   10 DARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYT-----TDSDGYATMTVTETDLINTSSPAKITVTTYDPRQNVLKTVDPLGNLWSNEYTDSL--------------------------------NPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYS-TYLYYDANGNLNQ---VKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYS--PFSNGVSNLGNLTKITSPSGPNGAPA-REVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSS-NRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKSG 1086
            D RG +A+QY Y    D  G  ++ + YG     Y YT        + ++       D    +     T T +D RQ V  TV  +G  +  EYT++L                                NP L T A D  L+   + YD+ GN+  +TD     T   YA   +SPLNPKHRNL+  I RP + V G    Y  T L YD+ GNL +   VKDA++    + +  DG   +V DRNG+ T F YS  PF+       NL  + +P G N A   RE+   YD+Y NL SV D LG+   Y +DL  R+T   DA  +      V GLL     P N  S+    R+T F +D  GRV+ +    ++TQ   RV Y +D   ++ +L R+++G
Sbjct:  529 DPRGNIAIQYQY----DPLGRKQSELIYGELYREYEYTFYGVNMYEEDFSIYRPEPPDPNIPNGSGLFTSTNFDDRQRV-STVS-VGYWYYQEYTETLYDEVNDEYYDETYYERLAEEEAFTNYAYTDENNPLLKTLAIDSELREMSWAYDNFGNLTEMTDKEGYTTVYTYADTLDSPLNPKHRNLLRLIQRPEVEVNGAPVTYEPTELVYDSKGNLQEIIDVKDAESFKTIFTYTSDGLPETVTDRNGNTTEFQYSGTPFTKNQPR--NLVLVRTPKGENPADGFREIDMTYDIYSNLESVEDDLGNRFEYTYDLLDRVTDMLDARSQPSSYIYVDGLLTEAFSPPNAASNDLTPRKTTFDHDLFGRVVGIYQQFDSTQVS-RVAYGFDGRSQLRELDRIRNG 923          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A3D1LLU6_9DELT (DUF6531 domain-containing protein n=3 Tax=Geobacteraceae TaxID=213422 RepID=A0A3D1LLU6_9DELT)

HSP 1 Score: 65.5 bits (158), Expect = 1.100e-7
Identity = 98/382 (25.65%), Postives = 136/382 (35.60%), Query Frame = 1
Query:  166 DLINTSSPAKITVTTYDPRQ--NVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNY---------------------------------STY----------------------LYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTI-VQGLLD---HVTLPT----------NQGSSSNRR-----QTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
            DL NT+   K  +T  D ++  N+L T        +  Y+     YLVT  TDP +  T   + S G +K +TDA L  TT  Y  +T      K    +  I+ P     GV T+Y                                 STY                        YDAN NLN VKDA+ +   Y    + + + + D     T   Y     G S          PS  NGA            D L SVTDA  HS +Y +D   R+   TD  GK    T    G LD   + T  T          N+G  + ++        + YD+ GR+ Q  S+ N       + Y + ++   +   RLKS
Sbjct:  537 DLTNTNPAFKNLITRMDDKRGPNILTT--------TYSYSTDAEGYLVTAVTDPAMATTVIRHYSNGKIKDITDANLKQTTYNYYDDTPQNQAAKVVGFLKSIVTPD----GVTTSYYDPSNVNVAYDANGNNIWHVILDKDGVPRKTVISTYDDRNRLQTVTTRAPGQPDIITTYGYDANDNLNSVKDAEQKETKYLFDFNRQTTKITDARLKSTDLVY-----GGSGC--------PSCGNGA------------DKLTSVTDANQHSTTYSYDKVGRLEYETDPLGKKYHYTYHPNGKLDKKYNATSGTDVLQVSYNHNNRGQLTGKQYADGSSVSYGYDENGRI-QTASNAN-------ISYTFSNYTGGSYKGRLKS 873          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1I6KST7_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Dyella sp. OK004 TaxID=1855292 RepID=A0A1I6KST7_9GAMM)

HSP 1 Score: 63.5 bits (153), Expect = 4.040e-7
Identity = 61/224 (27.23%), Postives = 95/224 (42.41%), Query Frame = 1
Query:  526 YDANGNLNQVKDAK---NQSAYYAHRPDGRLSSVADRNGHITSFD----YSPFSNGVSNLGNLTKIT-SPSG--------PNGAPAREVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEY-DSFDRVTKLARLKSGTEKSFLFEYDILDRQTSSKD 1146
            Y+A G +  V   +   N    Y +   GRL++V D  GH+TSFD    Y          G +T +T +P G          G PA     +Y+   +++  TDA G  +SY +D   R+T  TDA+G  +  T+     + +   T    ++ +R    TY+   ++L V+ + N T     + Y Y D +D     A     T       YD L R  S+ D
Sbjct:   32 YNAQGLVASVDGPRTDVNDVTGYTYDASGRLATVTDAQGHVTSFDTYDTYGHPGRSTDPNGVVTTMTYTPEGWLQSTTRDSTGTPATTT-MSYNAVGDVIQTTDADGVVVSYTYDDARRLTDITDAFGNRIHYTL-DAAGNRLKEETFDSPNTLKRTISHTYNSLSQLLTVVDAFNRTI----LNYNYPDGYDAAGNPAHSSDATGVQRKRGYDALHRLVSTID 249          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: UPI0017474C64 (DNRLRE domain-containing protein n=1 Tax=Hazenella sp. IB182357 TaxID=2771433 RepID=UPI0017474C64)

HSP 1 Score: 63.2 bits (152), Expect = 6.510e-7
Identity = 82/336 (24.40%), Postives = 138/336 (41.07%), Query Frame = 1
Query:  205 TTYDPRQNVLKTVDPLGNLWS---NEYTD----SLN--PYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSA-----YYAHRPDGRLSSVADR-------NGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDN--LLSVTDALGHSISYQW-DLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPT------NQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQM-RVRYEYDSFDRVTKLARLKSGTE-KSFLFEYD 1116
            T YD   N +    P GN+     N+YT      LN  P  VT  T  +++ T   YDS GN+ S+TD   N TT  Y             N +  ++  S+         + Y Y DA  NL +++  +  +      +        L+ + +R       +G+        F+     LGNLTK+++P         E  F Y  YDN  L  + D    +  YQ+ DL  +  R   +     E T+     D   L +      N G +  ++Q  + YD    ++Q++   ++T  Q+ R   EY S ++V+++  +  G E ++  ++YD
Sbjct: 1730 TAYDEVGNPISVTQPKGNVTEDNPNDYTVRTSYDLNHRPNKVTDVTGKSIEKT---YDSDGNMTSITDKEGNTTTYTY-------------NAIGLLMEESVPHNDQVNRITKYKY-DAVQNLVEIESPRGSATAQTGDFVEKMVYDELNRIKERIFPRDPASGNTRFQTEHKFTYEYDILGNLTKVSAPPSEGQTDRNETVFTY--YDNGLLKGIQDPWEITTQYQYNDLGLQTKRIVSSSDGSQERTMSWNYYDDGKLKSMTDFGLNTGENQ-KKQFEYQYDLHDNLIQMID--HSTDAQIDRYETEYTSLEQVSQIKEILGGNEVRTISYQYD 2043          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A6P2EI96_9BURK (Cell wall-associated polypeptide CWBP200 n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EI96_9BURK)

HSP 1 Score: 62.0 bits (149), Expect = 1.460e-6
Identity = 90/346 (26.01%), Postives = 129/346 (37.28%), Query Frame = 1
Query:  178 TSSPAKITVTTYDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTD-AYLNVT----TLVYAQETE--SPLNPKHRNLVNQIIRPSILVG-GVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLS--------------------SVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALG-HSISYQWDLNSRMTRTT----------DAYGKYVENTIVQGLL-----DHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
            T +  K T   YD     +K+    G  W    +       VTRA  P L     T   +     +TD AY +V     T  Y   T+  + +     NL + +   +  VG  +A  Y+TY Y   NGN++ VKDAKN    + +    RL+                    +  D NG++TS           +  NL ++T+ S PN A    V F YDL     S   A G H+ISY WD   R+  TT          DA G  +  T           D    P+    + +     + YDD GR   V      T ++        ++D    LA LK+
Sbjct: 1331 TDAMGKQTRVAYDADGRAVKSAAQQGTQWLVSCSRYSETGKVTRAWGPALTAAATTCPGEAAPTPITDIAYDDVDRPFRTTQYLATTDGGNRVTETVYNLDDSVQAVNKAVGTALAQAYATYSY-TPNGNVDSVKDAKNNLTVHTYDGFDRLARTYYPLPNMPLYGNANDYEENAYDANGNVTSLRKRNGQTIAQSWDNLNRLTARSYPNTAD--NVQFGYDLRGLRTSAQFANGSHAISYAWDNAGRLASTTAGGKTLSHQYDAAGNRIRTTWPDAFYTTTSYDAANRPSVIQENGSVSLASYAYDDLGRRTTVTLGNGTTVQR--------AYDNQGALATLKN 1665          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1P8WH74_9PLAN (Cell wall-associated polypeptide n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WH74_9PLAN)

HSP 1 Score: 62.0 bits (149), Expect = 1.560e-6
Identity = 45/148 (30.41%), Postives = 66/148 (44.59%), Query Frame = 1
Query:  208 TYDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFD 651
            T++ R NVL   DPLG++    Y DS NP L T+  D +   TD  YD +GN+  + +  L      + Q   +       N V  I          A N++T   Y ANGNL ++ +A + SA++               GH+T FD
Sbjct: 3653 TFNDRGNVLTETDPLGSVREYRYEDSRNPDLETKIIDKDGHVTDLVYDGRGNL--LRNIELGPLDDPFDQPIVTIYTYDEGNRVRTITD--------ARNHTTTFRYFANGNLREIVNAADDSAFFXXXXXXXXXXXXXXKGHVTRFD 3790          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A6P2EP71_9BURK (Cell wall-associated polypeptide CWBP200 n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EP71_9BURK)

HSP 1 Score: 61.2 bits (147), Expect = 2.560e-6
Identity = 86/335 (25.67%), Postives = 124/335 (37.01%), Query Frame = 1
Query:  211 YDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTD-AYLNV------TTLVYAQETESPLNPKHRNLVNQIIRPSILVG-GVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLS--------------------SVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALG-HSISYQWDLNSRMTRTT----------DAYGKYVENTIVQGLL-----DHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
            YD     +K+    G  W    +       VTRA  P L     T   +     +TD AY +V      T  + A +  + +     NL + +   +  VG  +A  Y+TY Y   NGN++ VKDAKN    + +    RL+                    +  D NG++TS           +  NL ++T+ S PN A    V F YDL     S   A G H+ISY WD   R+  T           DA G  +  T           D  + P+    + N     + YDD GR   V      T ++         +D    LA LK+
Sbjct: 1339 YDADGRAVKSAAQQGTQWLVSCSRYSETGKVTRAWGPALTAAATTCPGEAAPTPITDIAYDDVDRPFRTTQYLPAADGGNRVTETIYNLDDTVQAVNKAVGTALAQAYATYTY-TPNGNVDSVKDAKNNLTVHTYDGFDRLARTYYPLPNMPLYGNANDYEENAYDANGNVTSLRKRNGQTIAQSWDNLNRLTARSYPNTAD--NVQFGYDLRGLRTSAQFANGTHAISYAWDNAGRLASTAAGGKTLSHQYDAAGNRIRTTWPDAFYTTTSYDAASRPSVIQENGNVNLASYAYDDLGRRTTVTLGNGTTVQR--------GYDNQGALATLKN 1662          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7W7XBV0_9ACTN (RHS repeat-associated protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A7W7XBV0_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 4.620e-6
Identity = 68/248 (27.42%), Postives = 96/248 (38.71%), Query Frame = 1
Query:  373 VTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDG-----------RLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREV--HFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQ-GLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLS---SINATQEQMRVRYEYDSFDRVTK 1065
            V DA  NVTT   A    S       + V Q   P   + G  T Y+    YD  GNL    + K  +      PD            +L SV +  G   S++Y        N+GN   +  P     A   +     ++DL   +  VTDA G   + ++D +S + R+TD  G   E    Q G      +P    S S  R T+F YD  G   +V+S   +  A  +    R EYD  +R  K
Sbjct: 1632 VYDANDNVTTSTAADGVVSTAXXXXADQVTQSTGPDNNLSGRTTRYT----YDKVGNLKTTTEPKGVATTSV--PDDYVTTNNYNEIYQLMSVVNAQGDKVSYEYD-------NVGNPVTVIDPKKNATADTTDYTSKSSFDLNHRVTKVTDAAGKFTTSEYDKDSLLVRSTDKEGNVSEVVYDQRGKKIEQRVPY---SGSTLRVTKFEYDQMGNTTKVISPRGTATAAVDDFTSRTEYDKLNRPVK 1863          
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1F8U516_9FIRM (DUF6531 domain-containing protein (Fragment) n=1 Tax=Clostridiales bacterium GWB2_37_7 TaxID=1797677 RepID=A0A1F8U516_9FIRM)

HSP 1 Score: 59.7 bits (143), Expect = 7.570e-6
Identity = 58/278 (20.86%), Postives = 111/278 (39.93%), Query Frame = 1
Query:  508 YSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPS---------GPN----------GAPAREVHFAYDLYDNLLSVTDALGH--SISYQWDLNS-----RMTRTTDAYG-------KYVENTIVQGLLDHVTLPTNQGSSSNRRQ-----------------TRFTYDDPGRVLQVLS---SINATQEQMRVRYEYDSFDRVTKLARLKSGTEKSFLFEYDILDRQTSSKDPLLRETTTAYQP 1182
            + T  Y++ +G LN + D  N S  +A+  DG +  + D +G    F+Y+         G LT IT  +         G N          G    E  + YD ++NL+++TDALG+  +++Y +D+N      ++ +     G       +Y       G++  VT P ++ +                       T++ +D+   +++V+     +    ++ +    YD+   V ++   K+   +S  + YD      +  D   R T  AY P
Sbjct:  528 FGTRYYFNTSGKLNHITDTNNNSTTFAYLGDGNIDRITDPSGREVVFNYTS--------GKLTSITGSNITTVEYAFTGNNLTSMKKKDASGTILTEESYGYDTWNNLITITDALGNVTTMTYSYDVNLDRRIYKVEKKLTIDGVLETLTTQYTYAIAADGIITTVTDPKSKITEYKTNNMGNVVKIIEDMCGLNINTQYLWDEQQNLVEVIDPKGEVELDPDKYKTVLNYDAKGDVKRIVNPKN---QSSTYNYDTKSNPVNINDFAGRPTVNAYDP 794          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A7Z9PVP0_9BACT7.410e-5937.50RHS repeat protein (Fragment) n=1 Tax=Phycisphaera... [more]
A0A7Z9PQQ4_9BACT6.790e-4232.67RHS repeat protein (Fragment) n=1 Tax=Phycisphaera... [more]
A0A3D1LLU6_9DELT1.100e-725.65DUF6531 domain-containing protein n=3 Tax=Geobacte... [more]
A0A1I6KST7_9GAMM4.040e-727.23RHS repeat-associated core domain-containing prote... [more]
UPI0017474C646.510e-724.40DNRLRE domain-containing protein n=1 Tax=Hazenella... [more]
A0A6P2EI96_9BURK1.460e-626.01Cell wall-associated polypeptide CWBP200 n=1 Tax=V... [more]
A0A1P8WH74_9PLAN1.560e-630.41Cell wall-associated polypeptide n=1 Tax=Fuerstiel... [more]
A0A6P2EP71_9BURK2.560e-625.67Cell wall-associated polypeptide CWBP200 n=1 Tax=V... [more]
A0A7W7XBV0_9ACTN4.620e-627.42RHS repeat-associated protein n=3 Tax=Streptomyces... [more]
A0A1F8U516_9FIRM7.570e-620.86DUF6531 domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19208contigP-wetherbeei_contig19208:88..1296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123070.KB899256_gene2193
PFAMsPT-HINT,RHS_repeat
Model size1209
Max annot lvl203494|Verrucomicrobiae
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.22e-09
EggNOG OGsCOG2730@1|root,COG2931@1|root,COG3209@1|root,COG3266@1|root,COG5184@1|root,COG2730@2|Bacteria,COG2931@2|Bacteria,COG3209@2|Bacteria,COG3266@2|Bacteria,COG5184@2|Bacteria,46S8F@74201|Verrucomicrobia,2IV48@203494|Verrucomicrobiae
DescriptionRHS Repeat
Cds size1209
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.604186-CDS-P-wetherbeei_contig19208:87..12961683186166.604186-CDS-P-wetherbeei_contig19208:87..1296Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19208 88..1296 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19208.2.1prot_P-wetherbeei_contig19208.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19208 88..1296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19208.2.1

>prot_P-wetherbeei_contig19208.2.1 ID=prot_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp
QRKDARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYTTDSDGYATM
TVTETDLINTSSPAKITVTTYDPRQNVLKTVDPLGNLWSNEYTDSLNPYL
VTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHR
NLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPD
GRLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHF
AYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLD
HVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSF
DRVTKLARLKSGTEKSFLFEYDILDRQTSSKDPLLRETTTAYQPFCKSYT
QTS
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mRNA from alignment at P-wetherbeei_contig19208:88..1296+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19208.2.1 ID=mRNA_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig19208:88..1296+ (Phaeothamnion wetherbeei SAG_119_79)
CAGAGAAAAGACGCGCGAGGTGAAGTTGCCGTCCAATACAGCTACTACAG TAGTGGGGACTACACGGGCCTGGTTGAAAACGTCATCTCTTACGGCCTGA CCCAGTTGAACTATGTCTACACGACAGATTCCGACGGATACGCCACCATG ACCGTGACAGAAACGGATCTGATAAATACCAGCAGCCCAGCAAAAATCAC CGTCACAACCTACGACCCGCGCCAGAATGTCTTAAAAACGGTAGACCCAT TAGGCAATCTCTGGAGTAATGAATATACCGACAGCCTCAATCCCTACCTC GTTACTCGCGCAACCGATCCAAATCTCCAGCATACGGACTACACTTACGA CAGCCAGGGCAACGTAAAGTCTGTTACAGACGCCTATCTCAACGTGACGA CGCTCGTTTATGCGCAAGAAACGGAGAGCCCACTCAATCCCAAACACCGC AACCTAGTGAACCAGATCATTCGTCCCTCAATCCTGGTCGGCGGCGTTGC CACGAACTACTCGACCTACCTCTACTATGATGCGAACGGGAATCTCAATC AGGTCAAAGACGCCAAAAATCAATCGGCTTACTATGCCCATCGGCCCGAT GGCCGTCTGAGCAGCGTGGCCGACAGAAATGGTCACATCACAAGCTTTGA CTACAGCCCGTTCAGTAACGGCGTAAGCAACCTGGGGAACCTCACCAAGA TTACGTCTCCCTCCGGACCCAACGGAGCGCCGGCGCGCGAGGTACACTTC GCCTACGACCTCTACGACAACTTGCTCTCCGTCACGGATGCTCTGGGCCA TTCCATCTCCTACCAATGGGACCTCAACAGTCGCATGACTCGGACCACGG ACGCTTATGGGAAGTATGTGGAGAACACGATTGTCCAGGGGCTTCTGGAC CACGTCACTCTACCTACCAACCAGGGCTCGTCCTCGAACAGGCGACAGAC TCGATTTACTTATGACGATCCGGGTCGAGTGCTGCAGGTCCTGAGCTCCA TCAACGCTACCCAGGAACAGATGCGAGTGCGTTACGAGTATGACTCGTTT GATCGCGTCACCAAACTGGCGCGCCTCAAGAGCGGGACTGAAAAGAGTTT CCTTTTCGAATATGACATCCTCGACCGACAGACGAGCTCGAAAGATCCGT TGCTACGGGAAACCACTACGGCCTATCAGCCGTTTTGCAAATCCTACACC CAGACTTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19208:88..1296+

>mRNA_P-wetherbeei_contig19208.2.1 ID=mRNA_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig19208:88..1296+ (Phaeothamnion wetherbeei SAG_119_79)
CAGAGAAAAGACGCGCGAGGTGAAGTTGCCGTCCAATACAGCTACTACAG
TAGTGGGGACTACACGGGCCTGGTTGAAAACGTCATCTCTTACGGCCTGA
CCCAGTTGAACTATGTCTACACGACAGATTCCGACGGATACGCCACCATG
ACCGTGACAGAAACGGATCTGATAAATACCAGCAGCCCAGCAAAAATCAC
CGTCACAACCTACGACCCGCGCCAGAATGTCTTAAAAACGGTAGACCCAT
TAGGCAATCTCTGGAGTAATGAATATACCGACAGCCTCAATCCCTACCTC
GTTACTCGCGCAACCGATCCAAATCTCCAGCATACGGACTACACTTACGA
CAGCCAGGGCAACGTAAAGTCTGTTACAGACGCCTATCTCAACGTGACGA
CGCTCGTTTATGCGCAAGAAACGGAGAGCCCACTCAATCCCAAACACCGC
AACCTAGTGAACCAGATCATTCGTCCCTCAATCCTGGTCGGCGGCGTTGC
CACGAACTACTCGACCTACCTCTACTATGATGCGAACGGGAATCTCAATC
AGGTCAAAGACGCCAAAAATCAATCGGCTTACTATGCCCATCGGCCCGAT
GGCCGTCTGAGCAGCGTGGCCGACAGAAATGGTCACATCACAAGCTTTGA
CTACAGCCCGTTCAGTAACGGCGTAAGCAACCTGGGGAACCTCACCAAGA
TTACGTCTCCCTCCGGACCCAACGGAGCGCCGGCGCGCGAGGTACACTTC
GCCTACGACCTCTACGACAACTTGCTCTCCGTCACGGATGCTCTGGGCCA
TTCCATCTCCTACCAATGGGACCTCAACAGTCGCATGACTCGGACCACGG
ACGCTTATGGGAAGTATGTGGAGAACACGATTGTCCAGGGGCTTCTGGAC
CACGTCACTCTACCTACCAACCAGGGCTCGTCCTCGAACAGGCGACAGAC
TCGATTTACTTATGACGATCCGGGTCGAGTGCTGCAGGTCCTGAGCTCCA
TCAACGCTACCCAGGAACAGATGCGAGTGCGTTACGAGTATGACTCGTTT
GATCGCGTCACCAAACTGGCGCGCCTCAAGAGCGGGACTGAAAAGAGTTT
CCTTTTCGAATATGACATCCTCGACCGACAGACGAGCTCGAAAGATCCGT
TGCTACGGGAAACCACTACGGCCTATCAGCCGTTTTGCAAATCCTACACC
CAGACTTCG
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