prot_P-wetherbeei_contig19200.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19200.1.1
Unique Nameprot_P-wetherbeei_contig19200.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length44
Homology
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BLAST of mRNA_P-wetherbeei_contig19200.1.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-8
Identity = 24/36 (66.67%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    9 VLQPPPRGLRSCCAVQRVRATLRTYFRMFLQEQRPI 44
            +LQP P+GL+S C +QR R+T+RTYFR+FLQEQRP+
Sbjct:  238 LLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPL 273
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BLAST of mRNA_P-wetherbeei_contig19200.1.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 2.780e-8
Identity = 24/36 (66.67%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    9 VLQPPPRGLRSCCAVQRVRATLRTYFRMFLQEQRPI 44
            +LQP P+GL+S C +QR R+T+RTYFR+FLQEQRP+
Sbjct:  168 LLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPL 203
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19200.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJG2_9PHAE2.780e-866.67Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGZ8_ECTSI2.780e-866.67Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19200contigP-wetherbeei_contig19200:38..169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19200.1.1mRNA_P-wetherbeei_contig19200.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19200 38..169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19200.1.1 ID=prot_P-wetherbeei_contig19200.1.1|Name=mRNA_P-wetherbeei_contig19200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=44bp
MALVLAGAVLQPPPRGLRSCCAVQRVRATLRTYFRMFLQEQRPI
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