mRNA_P-wetherbeei_contig19126.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A835ZF46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF46_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.890e-23 Identity = 68/188 (36.17%), Postives = 89/188 (47.34%), Query Frame = 1
Query: 37 LRSGMLGTPIHKEKDL--YVTRGDFIVVEYSEERPPLVSLPGMASRFINWYRPPDNGDSGTGTGGGPGXXXXXXXXXXXXFGGAGHGGGLRRGGDAALSGMLAGPVLKRQTSSGTVGGGSGAGGSGGDLRRPPERVDGQTWVLDKDQESPFVGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVRE 594
LR G + + +E+DL + FI+VEY EERPPL+ GMASR INW+R + RQ S G G +PPER DGQ L+ +ESPF+G++ G++QPS+CN L+RAPLFEH+ARDTDFLL+RE
Sbjct: 231 LRGGRTMSTMRRERDLIPFEPSARFILVEYVEERPPLLCATGMASRVINWWRSTXXXXXXX----------------------------------XXXXXXXXXXRIARQASFGAEGD-----------EKPPERPDGQPQRLEPQEESPFMGEIRAGVVQPSICNELYRAPLFEHSARDTDFLLIRE 373
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: W7TYE8_9STRA (Histone acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE8_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.040e-17 Identity = 75/199 (37.69%), Postives = 93/199 (46.73%), Query Frame = 1
Query: 16 GAGGGGGLRSG--MLGTPIHKEKDLYVTRGDFIVVEYSEERPPLVSLPGMASRFIN-WYRPPDNGDSGTGTGGGPGXXXXXXXXXXXXFGGAGHGGGLRRGGDAALSGMLAGPVLKRQTSSGTVGGGSGAGGSGGDLRRP----PERVDGQTWVLDKDQESPFVGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVR 591
G GG G L G M I KDL G+ +VVEY EERP L+S PGMAS+ +N W P N ++ G G GGG RG P + R+ GA DL R P+ +GQT VL + SPF+G + GM Q +L N L++APLFEH A+ TDFLLVR
Sbjct: 656 GGGGRGALAGGHPMSTRTIRTTKDLNAYEGELVVVEYPEERPLLLSNPGMASKLLNLWRLSPQNVEA------------ERAMALERHAAGLGGGGGKSRGP----------PRITREN--------LGASSVAMDLDRVHAGVPDFKEGQTCVLYPEDPSPFIGQIEDGMRQLALFNNLYKAPLFEHKAKPTDFLLVR 824
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: K0T8U3_THAOC (Bromo domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8U3_THAOC) HSP 1 Score: 76.3 bits (186), Expect = 1.740e-12 Identity = 65/189 (34.39%), Postives = 85/189 (44.97%), Query Frame = 1
Query: 79 DLYVTRGDFIVVEYSEERPPLVSLPGMASRFINWYRPPDNGDSGTGTGGGPGXXXXXXXXXXXXFGGAGHGGGLRRGGDAALSGMLAGP---VLK-----------RQTSSGTVGGGSGAGGSGGDLRRPPERV-----DGQTWVLDKDQESPFVGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLV 588
DL + GD +V+EYSEERPPL+ GM +R +N+YR D GGG G AGH G R A L GP V K R +G GG GA ++P E+V +G T +L PF+G+V G Q L + LF AP++ H + TDFL+V
Sbjct: 481 DLSPSAGDIVVLEYSEERPPLIMSKGMTARIVNYYRG-DRARCPISAGGGDRPMRKRHGDRASVGGRAGHAGPSDR---AERPPRLLGPGRYVPKSPADLIGIEPGRSRPAGAPGGPDGA---DPPAKKPKEKVIDVLPEGVTEILHNKVHGPFIGEVEDGQTQTGLISNLFAAPMYRHESDPTDFLMV 662
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 9.580e-8 Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 457 LDKDQESPFVGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVRE 594
L ++SPF+G++ PG Q S+CN LFRAP+F+H A D+DFLL+RE
Sbjct: 668 LSPQEDSPFLGEIRPGSEQASICNGLFRAPIFKHHAPDSDFLLIRE 713
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A316YF92_9BASI (Uncharacterized protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YF92_9BASI) HSP 1 Score: 61.2 bits (147), Expect = 2.330e-7 Identity = 48/165 (29.09%), Postives = 60/165 (36.36%), Query Frame = 1
Query: 103 FIVVEYSEERPPLVSLPGMASRFINWYRPPDNGDSGTGTGGGPGXXXXXXXXXXXXFGGAGHGGGLRRGGDAALSGMLAGPVLKRQTSSGTVGGGSGAGGSGGDLRRPPERVDGQTWVLDKDQESPFV--GDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVR 591
F++ EYSEE PP++S GM S +N+YR D+ D P+ G+ VLD ESPF+ G V PG QP+L NR+ RAPLF H TDFLLVR
Sbjct: 796 FVLYEYSEEYPPVLSNLGMGSLLVNYYRKKDSKDE-----------------------------------------------------------------------HIPKADLGEPVVLDVSDESPFMKFGSVEPGRTQPTLYNRMIRAPLFRHKPSQTDFLLVR 889
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A1Y1WMJ7_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WMJ7_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 2.850e-7 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 442 GQTWVLDKDQESPFV--GDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVRE-ARPRGRWNYRGVE 633
G+ ++LD SPF+ G+V PG + P+L N +FRAPLF H R TDFL+V+ ++ RW RG++
Sbjct: 237 GELFILDVADVSPFLNFGNVEPGQVIPALYNNMFRAPLFSHKVRPTDFLVVKHVSKGESRWYVRGIQ 303
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A316VFC5_9BASI (Uncharacterized protein n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VFC5_9BASI) HSP 1 Score: 59.3 bits (142), Expect = 1.020e-6 Identity = 47/165 (28.48%), Postives = 60/165 (36.36%), Query Frame = 1
Query: 103 FIVVEYSEERPPLVSLPGMASRFINWYRPPDNGDSGTGTGGGPGXXXXXXXXXXXXFGGAGHGGGLRRGGDAALSGMLAGPVLKRQTSSGTVGGGSGAGGSGGDLRRPPERVDGQTWVLDKDQESPFV--GDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVR 591
FI+ EY+EE PP++S GM S +N+YR D D P+ G+T VLD ESPF+ G V PG +QP+L NR+ RAPLF H DFLL+R
Sbjct: 490 FILYEYTEEYPPVLSNLGMGSLLVNYYRKRDARDE-----------------------------------------------------------------------HIPKSDLGETVVLDVSDESPFMKFGSVEPGRVQPTLYNRMIRAPLFRHKPAHNDFLLIR 583
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A3N2QA21_9PEZI (DUF3591 domain-containing protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2QA21_9PEZI) HSP 1 Score: 59.3 bits (142), Expect = 1.040e-6 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 424 PPERVDGQTWVLDKDQESPFV--GDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVREARPRGRWNYRGVEG 636
PP+ G++ +L + SPF G+V PG + P+L N+++RAP+FEH R TDFL VR + GVEG
Sbjct: 724 PPKLEVGESHILHPEDRSPFAIFGEVNPGEVTPTLLNQMYRAPIFEHTPRSTDFLCVRSST--------GVEG 788
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: A0A175VUH6_9PEZI (Transcription initiation factor TFIID subunit 1 n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175VUH6_9PEZI) HSP 1 Score: 58.9 bits (141), Expect = 1.380e-6 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 421 RPPERVDGQTWVLDKDQESPF--VGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVREARPRG--RWNYRGVE 633
RP +R G+ ++L + SPF VG+V PG P+L N++FRAP+F+H+ R TDFLL R + W R ++
Sbjct: 567 RPEKRELGEPYILMPEDRSPFAMVGEVHPGETVPTLHNQMFRAPIFKHSPRSTDFLLGRSTTGKSGSSWYIRNID 641
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Match: G2Q436_MYCTT (TAF1-like protein n=1 Tax=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) TaxID=573729 RepID=G2Q436_MYCTT) HSP 1 Score: 58.2 bits (139), Expect = 2.510e-6 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 421 RPPERVDGQTWVLDKDQESPF--VGDVAPGMLQPSLCNRLFRAPLFEHAARDTDFLLVREARPRG--RWNYRGVE 633
RP +R G+ ++L + SPF VG V PG P+L N++FRAP+F+H R TDF+L R R W R ++
Sbjct: 566 RPEKRELGEPYILMPEDRSPFAMVGQVHPGETVPTLHNQMFRAPIFKHTPRSTDFILGRSTTGRNGSTWYLRNID 640 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19126.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19126.1.1 >prot_P-wetherbeei_contig19126.1.1 ID=prot_P-wetherbeei_contig19126.1.1|Name=mRNA_P-wetherbeei_contig19126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp KGGGFGAGGGGGLRSGMLGTPIHKEKDLYVTRGDFIVVEYSEERPPLVSLback to top mRNA from alignment at P-wetherbeei_contig19126:604..1242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19126.1.1 ID=mRNA_P-wetherbeei_contig19126.1.1|Name=mRNA_P-wetherbeei_contig19126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig19126:604..1242+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19126:604..1242+ >mRNA_P-wetherbeei_contig19126.1.1 ID=mRNA_P-wetherbeei_contig19126.1.1|Name=mRNA_P-wetherbeei_contig19126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig19126:604..1242+ (Phaeothamnion wetherbeei SAG_119_79)back to top |