mRNA_P-wetherbeei_contig1912.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: D8LI31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI31_ECTSI) HSP 1 Score: 328 bits (842), Expect = 1.050e-100 Identity = 319/666 (47.90%), Postives = 383/666 (57.51%), Query Frame = 1
Query: 1 RRWRFVAGALLATFSHVFAGDPSIAHVEHPFRHFAEWLREVDPDLRNAESNALSRAITVLSKSQKTIKSFDGMAHELGGRIGGADVSTANIERLKAEAAAARDAEKAKVARRLLWKLVNVELALNAAEAAEAAAQPDPIAADAFFAEAGLSPLPMPAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTAGPVAAFTQAEGAAALSPAEQLPP-----------------------------------------------------------QPLVQSVVVPIPGGAGDGDYGDGAEVRCHVRLDAAGR-----RVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGA--GYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-------ASDWRRCIGAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
R W G LA + A DPS+ EHPFR+ A WLRE PD+R+AE A+SR ITVLS SQ +KSFDGMA+EL G+I STA+IE+L +A A K A +L+ L+ VE ALN+AEAAE A+Q DP A + +AGL LP P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX +PL ++ VV + G EVRC + LD G R+V+AVGDSL G AL+ +L PA ++LASHGLMRET Y N A+ A +L+ G I + P GA GY V C GHSFGGAVA LAG+LDG ++ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A W +G R V V+LGCPPCLS+NL LPFVT+F+LGDD+VPR S SL+RL+ RL V+P+G+GLL++ VA L +D AGVA+QGVR +T EDD L VPGRVWF KPRRL GAT+ RVMRGN++ED+LWQ+ D++L+KSMLSHHRLD Y+KILDRV
Sbjct: 8 RCWLVAFGGTLACWV-ALAADPSLQQAEHPFRNLAAWLREASPDMRSAEPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKETG-STADIEKLTGQAELYESASSVKKANKLVRLLIEVERALNSAEAAEIASQSDPSRAAQYMKDAGLRFLPDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPTRVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPL-EAFVVNVAG----------CEVRCFLMLDERGGEEGEGRLVVAVGDSLTGEALLESLFEEPAVVQLASHGLMRETAYVNRVAFQCACDILEWAGPFIKASV-EPGGAFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEPSGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRVDGAEPW---VGIRRDGVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQVMPKGKGLLSQGVAFSTSLFTDVAGVAMQGVRQATTLGEDDARLTVPGRVWFAKPRRLKNGATLKRVMRGNVKEDMLWQLHDIMLTKSMLSHHRLDKYIKILDRV 656
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A835YUE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE7_9STRA) HSP 1 Score: 291 bits (744), Expect = 5.510e-88 Identity = 237/526 (45.06%), Postives = 305/526 (57.98%), Query Frame = 1
Query: 217 MAHELGGRIGGADVSTANIERLKAEAAAARDAEKAKVARRLLWKLVNVELALNAAEAAEAAAQP--DPIAADAFFAEAGLSPLPMPAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTAGPVA---AFTQAEGAAALSPAEQLPPQPLVQSVVVPIPGGAGDGDYGDGAEVRCHVRLDAAGRRVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGAGYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASDWRRCIGAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
MA+E+GGR+ + ++TA++ ++ EA A A A +L+ LV +E AL+AAE E AA +P A + A+AG +P+PAVPXXXXXXXXXXXXXX TAGP + AFT A+ AAAL+ QLPP P V ++ VP G G GA V C + +A G+RVV A+ D L G AL+R L+A P L LA+ GL+ ET++ A + AA A+L A+ A+ +FL SPAGAG +V VGHSF GAVA + AG+LDG L A G G+ S + XXXXXXX + + +GAARGRV V+ GCPPC+S ALP VT+F+LGDD+VPR+S SL++L+ RL VLPRG G +S+A+G L +D AGVA QG+R S A DD AL VPG VWFVKPRRL GATM++ G LR+DVLWQ+ DV+L+KSMLSHH L YV +LDRV
Sbjct: 1 MAYEVGGRMSKSSLTTADVHAVREEALATGSASVESDALKLMELLVEIEKALSAAEIVECAAADLANPDTAADYAAQAGY--VPLPAVPXXXXXXXXXXXXXXQTVADASSDAAQAAMQQGDKDNAGDA----TAGPDSKGGAFTAAD-AAALA---QLPPVPPV-TIPVPAGGDTGSSSSSSGA-VHCRLLYNAQGKRVVAALADDLGGGALLRALSAAPIALPLAARGLLHETLHTAPAVWAAAHALLAAIAPAVLNFLRSPAGAGATVLFVGHSFAGAVAAVAAGLLDGAL-----AVEGGGGSXXXXXX--XSGRRSEGKVGSAEARCKGGSSRRAKGVAEGGDGGMXXXXXXXXSGGY---VGAARGRVKCVTFGCPPCVSGAAALPCVTSFVLGDDMVPRVSAQSLEQLKRRLRQVLPRGSGFFGQSLAMGTTLFTDVAGVAAQGLRQRSAAGGDDSALIVPGTVWFVKPRRLRAGATMTKSRSGALRDDVLWQMHDVMLTKSMLSHHSLARYVAVLDRV 504
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A4D9DDN3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDN3_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.150e-34 Identity = 139/362 (38.40%), Postives = 191/362 (52.76%), Query Frame = 1
Query: 748 DGAEVRCHVRLDAAGRRVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGAGYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASDW----RRCIGAARGRVAGVSLGCPPCLSRNLA--LPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGL-----LARSVAIGAGLLSDAAGVAVQGV-RHYSTAAEDDV------ALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
+G R + +D RR+ L+VGDSL A + L APP + L GL+R ++ N + AA V++ V + A Y++ VG S GG+V L+AGVLDG + + A + T+ T A++ XXXXXXXXXXXXXXXXXXXXX S W R G A V PC+S+N+ F T+FILGDD++PR + S+KRL +RL + G ARS + G +Q V H T E++ AL +PGRV+++KPR+LH GAT+ VMRGNLREDVLW++ D+ +S+SML HH LD Y+ +L R+
Sbjct: 243 EGGTFRFLLLVDRDSRRLTLSVGDSLTWAQRLDVLRAPPLTVPLRPRGLLRRSMMVNPRLWAAAATVIERVRAVLTT--ARETCPNYALHVVGFSLGGSVGALVAGVLDGTIFVEGAVPAP---PTRRSHTRRGRAARAGVAVPEEGEXXXXXXXXXXXXXXXXXXXXXSS------TSSWAHALRGATGLAHDNVTAFVFAPSPCISKNIRGLRRFTTSFILGDDMMPRATALSIKRLEKRLLDYVSEGDATGIYFDYARS------WMKGVVGATLQQVVTHQVTKKEEEEDEGGVEALILPGRVYYIKPRKLHGGATIKEVMRGNLREDVLWKIHDIFVSQSMLKHHSLDKYITVLARI 587
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S0C3U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3U1_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.480e-24 Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRL-------------HRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
G RGR + +LG PPCLS N+ +VT+ + GDDVVPR ASL RL RL L G+L ++V G ++DA + V G++ +S +E ++ LA+ G+ + ++PRRL H + + + LR VLWQ+ DVLLSKS+ +HH L Y++ LDR+
Sbjct: 133 GFGRGRTSAFTLGAPPCLSPNVRAGYVTSLMYGDDVVPRTQRASLDRLCTRLQKQLK--GGVLQKTVGKSVGWMTDAVSLTVSGLKTHSHGSEGEETRLALVGKTYLIRPRRLGGGSSACGKISSFHEIGSTTHSAKDALRASVLWQLNDVLLSKSLWNHHALPSYIEGLDRL 303
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S2LJY6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJY6_9STRA) HSP 1 Score: 114 bits (284), Expect = 5.000e-23 Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRG------NLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
G AR RV+ + LGCPPC+S + + FVT+ I GDD+VPR S +L+RL R + G+L + V G +SDAA + V G+ S+ + D LAVPGRV+ ++PRR+ G++ + G N R VLWQ+ DVLLSKS+ HH Y++ LDRV
Sbjct: 377 GFARDRVSALCLGCPPCMS-GIEVDFVTSVINGDDIVPRSSYRTLQRLYGRTERSIK--GGILGKGV----GWMSDAARLTVTGLTSGSS-KKKDAHLAVPGRVYLIRPRRIGGGSSSIHEVGGSIGGRENFRAAVLWQLNDVLLSKSLWKHHSQSSYIRSLDRV 533
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: K0SZK5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZK5_THAOC) HSP 1 Score: 113 bits (282), Expect = 8.170e-23 Identity = 62/160 (38.75%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1312 RGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVM----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
+ R + +GCPPC+S N+ PFVT+ + GDDVV R+S+ASL L +R + G + + + G++SDA + V G+ + D L++PGRV+ V+PRRL G++ + + +LR VLWQ+KD+LLS+S+ SHH+++ Y++ LD+V
Sbjct: 370 KDRTSAHCIGCPPCVSANVPCPFVTSIVNGDDVVSRMSQASLHSLYDRTRRCMK--GGFIGKRL----GIMSDAVSLTVSGIGKDK---KGDEKLSLPGRVFLVRPRRLGGGSSSIHEVNDGGKQSLRAAVLWQLKDILLSRSLWSHHQVEGYIRTLDKV 520
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: B7GAF2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAF2_PHATC) HSP 1 Score: 112 bits (281), Expect = 1.130e-22 Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVA-LAVPGRVWFVKPRRLHRGATMSRV---MRGN---LREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
G + R + V+LG PP +S N+ FVT+ + GDDVV R S ASL RL +R VL RG L G G ++D +A ++ ++ +E + A LAVPGR + ++PRRL ++ V ++G LR VLWQ+ DVLLSKS+ HH+L+ Y++ LDRV
Sbjct: 362 GLGKERCSAVTLGAPPSMSANVPAEFVTSILYGDDVVGRASPASLTRLLKRTHRVLKRGNML-------GFGRVTDTISLAKDSLKTHAHGSEGEEARLAVPGRAYLIRPRRLSHACSIHEVGAQLKGGREALRAAVLWQLNDVLLSKSLWKHHQLESYIQGLDRV 520
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A6T5V5A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5V5A5_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.080e-22 Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRLHRGATMSRVM----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
G +GR + +G PP LS N+ FVT+ I GDD++ R ++ SL RL R+ L RG+ +++ G +SDA + + +++++ +E ++ L++PG +FVKPRRL ++ V G +R VLWQ+ D+LLSKSM HH LD Y++ LDRV
Sbjct: 386 GYGQGRSSAFIIGSPPVLSPNVRAAFVTSLIHGDDIICRTTKDSLDRLNNRMEKAL--SRGMFTKNI----GWVSDAVSLTMTNLKNHARGSEGEETKLSIPGTKYFVKPRRLGGACSLHHVGDISGTGAIRASVLWQLDDILLSKSMWDHHGLDNYIQALDRV 543
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S1UN44_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN44_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.220e-21 Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRLHRGATMSRVM-----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
G RGR + V+LG PPC+S NL FV + + GDDVV R + S++RL R + G L R V G +SD + +R ++ +E ++ L+V G+ + V+PRRL ++ V R LRE +LWQ+ DVLLS S+ HH+LD Y+ LDRV
Sbjct: 52 GFGRGRASAVALGPPPCISSNLKAAFVKSIVYGDDVVCRTTHESIERLLSRTKRSMK--GGFLGRQV----GWMSDTMSLTATSLRSHAQGSEGEEGRLSVAGQAYLVRPRRLGGTCSIHEVGSQKGGREALREKLLWQLNDVLLSDSLWKHHQLDSYIHGLDRV 210
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S4AGX7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGX7_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.220e-20 Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRL------HRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDR 1776
G R R + +++G PPCLS N+ F T+F+ GDD++ R ++ S+ RL R+ L G + + + G +SD + V G++ ++ +E ++ LA+PGR + V+PRRL H + + R LRE +LWQ+ DVLLS SM HH L+ YV+ LDR
Sbjct: 432 GLGRARASALAVGSPPCLSSNVVAAFCTSFVYGDDILCRTTKDSIDRLVRRIEKHLH--SGFIGKKL----GWVSDTMSLTVSGLQSHAHGSEGEEEKLAIPGRAYLVRPRRLGGICSIHEVGNLKKGGREALREALLWQMHDVLLSTSMWRHHNLESYVQGLDR 590 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1912.4.1 >prot_P-wetherbeei_contig1912.4.1 ID=prot_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=594bp RRWRFVAGALLATFSHVFAGDPSIAHVEHPFRHFAEWLREVDPDLRNAESback to top mRNA from alignment at P-wetherbeei_contig1912:3580..5921+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1912.4.1 ID=mRNA_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2342bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:3580..5921+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1912:3580..5921+ >mRNA_P-wetherbeei_contig1912.4.1 ID=mRNA_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1782bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:3580..5921+ (Phaeothamnion wetherbeei SAG_119_79)back to top |