mRNA_P-wetherbeei_contig19111.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19111.1.1
Unique NamemRNA_P-wetherbeei_contig19111.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A7X8XQ88_9BURK (Type II/IV secretion system protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XQ88_9BURK)

HSP 1 Score: 472 bits (1214), Expect = 7.410e-162
Identity = 232/391 (59.34%), Postives = 306/391 (78.26%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTF-EPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRVGR 1176
            +LL DA  APVV+ +N LFL+AME R SDIH EP+E+ T+VR+R+DG L++   +P  +H ++ ARLKV+++LDLAETRRPQDGRL + +G+  +D+R+S VPTL+GER+V+RLLEK+ +  ++++LGL    +  + D + + +G+ L+TGPTGSGKTTTLY +L ++ SP+RN+LTIEDPVEY++AG+GQIQVNE++ VTFA+GLRS+LRQDPD++MVGEIRD ETA IA++AALTGHLVLSTLHTNDAP+AATRL+DL VPP+LLSS LLG +AQRL RRLC+ CK     +    RRLG   +P G  F + VGC  CM TG+ GR G+YE+M VDEE+ SRIAR ED+R L   AR  GMR+L+EDAA KV  G T++ EA+R  R
Sbjct:   85 NLLADATDAPVVRQLNALFLRAMETRTSDIHFEPYEDRTVVRMRVDGTLYQVHEMPRSRHPQMVARLKVMARLDLAETRRPQDGRLHVHSGERHLDVRMSVVPTLHGERVVLRLLEKDVRLYNLEQLGLDVPDRAKVNDLVSNPYGLFLITGPTGSGKTTTLYAILDQIKSPERNILTIEDPVEYQIAGLGQIQVNEKVGVTFASGLRSVLRQDPDVLMVGEIRDPETAEIAIHAALTGHLVLSTLHTNDAPTAATRLLDLGVPPYLLSSSLLGAMAQRLVRRLCDHCKSPYQPKPNELRRLGMGELPPGGRFFQAVGCEKCMQTGYSGRSGIYEIMAVDEELRSRIARSEDSRTLSKLARESGMRTLMEDAAVKVAAGLTTVQEALRAAR 475          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A355TP68_9BACT (Type II secretion system protein GspE (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TP68_9BACT)

HSP 1 Score: 421 bits (1083), Expect = 6.540e-143
Identity = 205/326 (62.88%), Postives = 261/326 (80.06%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTF-EPVGCPACMNTG 981
            DLL DA  AP+V+L+NTLFLKAME R SDIHIEP+  +T+VR+RIDGVLHE  ++    H ++ AR+KV+S LDLAETR PQDGRL + +G   +D+R+S VPTL+GER+VMRLLEKN + LS+ +LGL E  +  + D + H +G+ L+TGPTGSGKTTTLY +L  + SP+RN++TIEDPVEY++AGVGQIQVNE+I +TFA+GLRS+LRQDPD++MVGEIRD ETA+IA++AALTGHLVLSTLHTNDAP+AATRL+DL +PP+LLSS LLG +AQRL R LC  CK+  D +     RLG + VP G+ F +PVGCP C  +G
Sbjct:   89 DLLADAADAPIVRLLNTLFLKAMETRTSDIHIEPYAEQTVVRMRIDGVLHEVHKMARSSHPQLVARIKVMSNLDLAETRHPQDGRLHVHSGDRQLDVRVSIVPTLHGERVVMRLLEKNLRMLSLKQLGLNEHDRQVVTDLVSHPYGLFLITGPTGSGKTTTLYAILDMIRSPERNIITIEDPVEYQLAGVGQIQVNEKIGMTFASGLRSVLRQDPDVIMVGEIRDPETADIAIHAALTGHLVLSTLHTNDAPTAATRLLDLGIPPYLLSSSLLGAMAQRLVRNLCPHCKQPCDPDPDDLYRLGIQKVPAGSQFYKPVGCPQCHGSG 414          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A7V3RYZ2_9DELT (Type II secretion system protein E n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3RYZ2_9DELT)

HSP 1 Score: 421 bits (1082), Expect = 1.500e-140
Identity = 208/389 (53.47%), Postives = 287/389 (73.78%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTF-EPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRV 1170
            DLL+ +  AP+++ VN+L  +A++ RASDIHIEPFE E +VR RIDGVL+E  R P +  S + +R+K++  L++AE R PQDGR++IK     +DIRLS++PT +GER VMRLL+++   L +D+LG        + D + HS G++LVTGPTGSGKTTTLY  L+++++P +N++TIEDP+EY++ G+GQIQVN +I++TFA GLRSI+RQDPD+++VGEIRDSETA IA+ A+LTGHLV STLHTNDAPSA TRLID+ + PFL+SS  L ++AQRL R LC +C+   + +A   + L  E   KG TF  P GCP C+NTG+ GR G+YE+M +D+E+ + I R  D+  L+  A+ KGM +L EDA +K   G TSLDE +RV
Sbjct:  176 DLLEASEEAPIIRFVNSLLYQAVKERASDIHIEPFEKEVLVRYRIDGVLYEVLRAPKRLQSSIISRVKIMGGLNIAEKRLPQDGRIRIKIAGKDIDIRLSTLPTAFGERTVMRLLDRSQVLLQLDDLGFARENLEQMNDLIHHSHGIILVTGPTGSGKTTTLYAALQKINTPDKNIITIEDPIEYQLPGIGQIQVNPKINLTFANGLRSIVRQDPDVILVGEIRDSETAEIAIQASLTGHLVFSTLHTNDAPSATTRLIDMGIEPFLISSSTLAILAQRLVRVLCRECRVPAEPDAQILKDLEGERWLKGATFFNPAGCPKCLNTGYIGRSGIYELMIIDDEIRNMINRRADSNELKQLAQKKGMLTLREDALRKAAEGITSLDEVLRV 564          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A7V3KCF3_9DELT (Type II secretion system protein E n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3KCF3_9DELT)

HSP 1 Score: 419 bits (1077), Expect = 8.520e-140
Identity = 209/390 (53.59%), Postives = 289/390 (74.10%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDH-EAAAWRRLGFENV-PKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRV 1170
            DLL+ +  AP+++  N+L  +A++ RASDIHIEPFE E +VRLRIDGVL+E  R P +  + + +R+K++  L++AE R PQDGR++IK     +DIRLS++PT +GER+VMRLL+++   L +D+LG        + D + HS G++LVTGPTGSGKTTTLY  L++++ P +N++TIEDP+EY++ G+GQIQVN +I++TFA GLRSI+RQDPD+++VGEIRDSETA+IA+ A+LTGHLV STLHTNDAPSA TRLID+ + PFL+SS +L ++AQRL R LC+ C R +DH +    + LG E V   GT ++PVGC  C+NTG+ GR G+YE++ VD+E+   I R  DA  L+  AR KGM +L EDA  K   G TS+ E +RV
Sbjct:  176 DLLEASDEAPIIRFANSLLFQAVKERASDIHIEPFEKELVVRLRIDGVLYEILRAPKRLQNAITSRIKIMGGLNIAEKRLPQDGRIRIKIAGKDIDIRLSTLPTAFGERVVMRLLDRSQVLLELDDLGFSPQNLAMMHDLIHHSHGIILVTGPTGSGKTTTLYAALQKINQPDKNIITIEDPIEYQLPGIGQIQVNPKINLTFANGLRSIVRQDPDVILVGEIRDSETADIAIQASLTGHLVFSTLHTNDAPSATTRLIDMGIEPFLISSSVLAILAQRLVRVLCKDC-RAIDHPDKEIVKALGGEKVLQNGTFYKPVGCEKCLNTGYIGRTGIYELLIVDDEIRQMINRRADANELKQRARQKGMLTLREDAMLKASQGITSIAEVLRV 564          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: F3YYC9_DESAF (Type II secretion system protein E n=3 Tax=Desulfocurvibacter africanus TaxID=873 RepID=F3YYC9_DESAF)

HSP 1 Score: 417 bits (1073), Expect = 5.610e-139
Identity = 204/388 (52.58%), Postives = 280/388 (72.16%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRV 1170
            DLL +   APV+KLVN +  +A++ RASDIH+EPF+NE +VR R+DGVLH    +P +  + VA+R+K+++KL++AE R PQDGR++++ G   VD+R+SS+PT +GER+VMRLLEKN + LS++ELG+       +R   + S G++LVTGPTGSGKTTTLY  L  ++SP +N+LTIEDP+EY++ G+GQ+QVN +ID+TFA GLRS++RQDPD+++VGEIRD ETA IA+ A+LTGHLV STLHTNDAPSA TRLID+ + PFL+SS +  +IAQRL R LC  CKR+    A   R +G            VGC  CM TG++GR  +YE MR+ E +   + R  DA  +R  A  +GM +L +D  ++VL G T+LDE +RV
Sbjct:  196 DLLDETSNAPVIKLVNHILAQAVKSRASDIHVEPFKNELLVRFRLDGVLHNILHLPKRLQAPVASRIKIMAKLNIAEKRLPQDGRIEVRIGNRQVDLRVSSLPTAFGERVVMRLLEKNARLLSLEELGMGPDHHAEMRRLTQLSHGIILVTGPTGSGKTTTLYAALSSINSPDKNILTIEDPIEYQLDGIGQMQVNAKIDLTFAKGLRSMVRQDPDVILVGEIRDRETAEIAIQASLTGHLVFSTLHTNDAPSAVTRLIDIGIEPFLVSSAVRTIIAQRLVRVLCPACKREDTPTAKELREMGLCGDAASVVHRAVGCSECMQTGYRGRTSIYEFMRLTESLQDLVVRNSDANQIRKLALSEGMCTLRQDGIRRVLNGVTTLDEVMRV 583          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A7C5L7W6_AQUAO (Type II/IV secretion system protein n=1 Tax=Aquifex aeolicus TaxID=63363 RepID=A0A7C5L7W6_AQUAO)

HSP 1 Score: 412 bits (1060), Expect = 1.250e-138
Identity = 205/391 (52.43%), Postives = 285/391 (72.89%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRVGRA 1179
            DLL     +P V LVN++ +KA  + ASDIH EP+ENE +VRLR+DG+LH+  ++P   +  V +R+KV+S L++AE R PQDGR++++ G   +D+R+S VPT++GER+V+RLL+K    L++D LGL+   +  ++      +G+VLVTGPTG+GKTTTLY +L  V  P++N++TIEDPVEY++ GV QIQVN ++ +TFA GLRSILRQDPDI+MVGEIRDSETA+IAV+AALTGHLVLSTLHTNDAPSA TRL D+ + PFL++S L GVIAQRL RR+CE CK          R LG E+  +G  +   GC  C+ TG++GR G++E++ +DE++ S I R +DA+ +R AA  +G R++LED  +KV  G T+  E + V R+
Sbjct:   80 DLLHAQDDSPAVSLVNSVLIKASTVGASDIHFEPYENEAVVRLRMDGILHDILKVPASTYQNVVSRIKVMSNLNVAERRIPQDGRIRVRIGNRDLDVRVSVVPTVFGERVVLRLLDKTGSLLTLDRLGLVPEDEVKVKRLARKPYGIVLVTGPTGAGKTTTLYAMLLYVKDPRKNIITIEDPVEYQIKGVSQIQVNPKVGLTFATGLRSILRQDPDIIMVGEIRDSETADIAVHAALTGHLVLSTLHTNDAPSAVTRLSDMGIEPFLIASSLEGVIAQRLVRRICEACKEAYTPSEEELRELGLESY-EGPFYRGQGCDHCLGTGYRGRVGIFEVLELDEDLRSLITRTQDAQEIRRAAVRRGFRTMLEDGIEKVKRGVTTSSELISVVRS 469          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A7C5YLX9_9DELT (Type II secretion system protein E n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5YLX9_9DELT)

HSP 1 Score: 414 bits (1063), Expect = 1.100e-137
Identity = 201/389 (51.67%), Postives = 289/389 (74.29%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTF-EPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRV 1170
            DLL+ +  AP+++ VN+L  +A++ RASDIHIEPFE + +VRLRIDGVL+E  + P +  + + +R+K++  L++AE R PQDGR++IK     +DIRLS++PT +GER+VMRLL+++   L ++ELG  +     + D + HS G+VLVTGPTGSGKTTTLY  L+++++P +N++TIEDP+EY++ G+GQIQVN +I+++FA GLRSI+RQDPD+++VGEIRD+ETA IA+ A+LTGHLV STLHTNDAPSA TRLID+ + PFL+SS +L ++AQRL R LC+ C+     +    + +G E+  K +TF  P GCP C+NTG+ GR G+YE++ VD+E+   I R  D+  ++  AR+KGM +L EDA +K   G TS+ E  RV
Sbjct:  176 DLLEASDEAPIIRFVNSLLYQAVKERASDIHIEPFERDLVVRLRIDGVLYEILKAPKRLQNSITSRVKIMGGLNIAEKRLPQDGRIRIKIAGKDIDIRLSTLPTAFGERVVMRLLDRSQVMLQLEELGFAQEHLAIMNDLIHHSHGIVLVTGPTGSGKTTTLYASLQKINTPDKNIITIEDPIEYQLPGIGQIQVNPKINLSFANGLRSIVRQDPDVILVGEIRDAETAEIAIQASLTGHLVFSTLHTNDAPSATTRLIDMGIEPFLISSSVLAILAQRLVRVLCKDCRVLTQPDRELLKAMGAEDFMKNSTFYNPTGCPKCLNTGYIGRTGIYELLVVDDEIRQMINRRADSNEIKHIARNKGMLTLREDAIRKASQGITSMAEVFRV 564          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: D3SMA7_THEAH (Type II secretion system protein E n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) TaxID=638303 RepID=D3SMA7_THEAH)

HSP 1 Score: 410 bits (1053), Expect = 1.430e-137
Identity = 205/394 (52.03%), Postives = 285/394 (72.34%), Query Frame = 1
Query:    1 VFDLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRVGRAQ 1182
            V DLL +    P V  VN L +K     ASDIHIEP+E ++ VR+R+DGVLH++ +IP   H +V AR+KVL+ L++AE R PQDG+++++ G   +DIR+S +PT++GER+V+RLL ++ K LS++ELGL +     L+   +  +GM+L TGPTG+GK+TTLY +L EV +P RN++TIEDP EY++ GV QIQVN ++ +TFAAGLR+ILRQDPD++MVGEIRDSETA IAV+AALTGHL+LSTLHTNDAPS+ +RL+DL V PFLL+S L  VIAQRL R++C QCK   +      R L  E     T +   GCPACM TG++GR G++E++ + E++   I R +DA+A+R  A  +G RS+LED  +KV+ G T+ +E +R  R +
Sbjct:   77 VTDLLLEESSGPAVDFVNQLLIKGATTGASDIHIEPYEGQSYVRIRLDGVLHDYVQIPLSLHQQVVARIKVLADLNVAERRTPQDGKMRVRVGGKDIDIRVSVIPTVFGERVVLRLLYRSEKILSLEELGLSQEDLAKLKRAAKKPYGMILATGPTGAGKSTTLYALLLEVKNPTRNIITIEDPPEYQLEGVSQIQVNPKVGLTFAAGLRAILRQDPDVIMVGEIRDSETAQIAVHAALTGHLLLSTLHTNDAPSSISRLVDLGVEPFLLASSLDVVIAQRLVRKICNQCKEPYEPTEEELRELSLEG--HYTFYRGKGCPACMGTGYRGRTGIFEILELTEDLKKLIVRTQDAQAIREEAVRRGFRSMLEDGVRKVMEGITTPEEIIRAVRTE 468          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: A0A117KZL7_9BACT (Protein-secreting ATPase n=2 Tax=Bacteria TaxID=2 RepID=A0A117KZL7_9BACT)

HSP 1 Score: 409 bits (1051), Expect = 6.470e-137
Identity = 204/388 (52.58%), Postives = 280/388 (72.16%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAAWRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRV 1170
            D++     AP++KLVN++  +A++ RASDIH+EP+E E  VR RIDG+L++   +P K HS + +R+KV+SKLD+AE   PQDGR+ +K     +DIR++ +PT +GERI +RLL+K    +S+ ELGL E  +  LR  +   +G++LVTGPTGSGKTTTLY +L+E+ +P+ N+LTIEDPVEY + G+ QIQVNE+  +TFA+GLRSILR DPDI+MVGEIRD ETA IAV AALTGHLVLSTLHTNDAPSA TRL+D+ + P+L+SS ++GVIAQRL RR+CE C+ + D +    + +G +   K   +   GCP+C+NTG+ GR  ++E +  DE++   + R +DA  LR  A  KGMR+L ED   K L G T+L E +RV
Sbjct:  106 DIITSEDSAPIIKLVNSIIFQAIKERASDIHLEPYERELRVRYRIDGILYDRLSLPKKLHSPILSRIKVMSKLDIAEHFIPQDGRIGVKLTDREIDIRVAVIPTQFGERITLRLLDKKQGLISLSELGLDEEGEKRLRRLISTPYGIILVTGPTGSGKTTTLYAILQELKTPEVNILTIEDPVEYELEGISQIQVNEKAGLTFASGLRSILRHDPDIIMVGEIRDRETAEIAVQAALTGHLVLSTLHTNDAPSAVTRLVDMGIEPYLVSSSVIGVIAQRLVRRICENCREEYDEDPEVLKEMGLKKGIK--LYRGKGCPSCLNTGYWGRVALFEQLDFDEDLRRELIRTQDASILRRMAIEKGMRTLKEDGILKALRGITTLSEVMRV 491          
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Match: UPI000495FD82 (type II secretion system ATPase GspE n=1 Tax=Persephonella sp. KM09-Lau-8 TaxID=1158345 RepID=UPI000495FD82)

HSP 1 Score: 408 bits (1048), Expect = 1.030e-136
Identity = 204/393 (51.91%), Postives = 291/393 (74.05%), Query Frame = 1
Query:    7 DLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGVLHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIRLSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMVLVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNERIDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHTNDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQV---DHEAAAWRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAREEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRVGR 1176
            DLL  +  APV++L+N+LFLKA+   ASDIH EPF ++ +VR R+DGVLHE   IP   + +V +R+K++S+L++AE R PQDGR+++K G   +D+R+S++PT++GERIV+RLL+K+ K L+++ELG L       R  ++  +G+VL+TGPTGSGK+TTLY  L E+ +P++N++TIEDPVEY++ G+ QIQVN +I++TFA GLRSILRQDPDI+MVGEIRD ETA IA++A++TGHLVLSTLHTNDAPSA  RL+D+ V PFL++S L GVIAQRL R +CE CK +    D E    ++   E V     ++  GC  C+ TG+KGR  +YE+M VDE++ + I++  +   L+  A  KGM++L+ED   KVL GRT+L+E ++V +
Sbjct:   84 DLLTGSD-APVIQLINSLFLKAIRANASDIHFEPFSDKVVVRFRMDGVLHEISTIPLNTYPQVVSRIKIISRLNVAEKRLPQDGRIKVKIGDKKLDMRVSTLPTVFGERIVIRLLDKSNKLLTLEELGFLPEDLEKYRRIIKKPYGLVLITGPTGSGKSTTLYASLLELKTPRKNIITIEDPVEYQIDGISQIQVNPKINLTFANGLRSILRQDPDIIMVGEIRDLETAEIAIHASMTGHLVLSTLHTNDAPSAVARLVDMGVEPFLIASSLEGVIAQRLVRTICENCKTEYTPSDAEVEEIKKHYKEPVDIRHLYKGEGCQECLGTGYKGRMAIYEIMEVDEDLRTTISKNPETTILKQKAIDKGMKTLIEDGISKVLQGRTTLEEVLQVAQ 475          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19111.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XQ88_9BURK7.410e-16259.34Type II/IV secretion system protein n=1 Tax=Burkho... [more]
A0A355TP68_9BACT6.540e-14362.88Type II secretion system protein GspE (Fragment) n... [more]
A0A7V3RYZ2_9DELT1.500e-14053.47Type II secretion system protein E n=1 Tax=Deltapr... [more]
A0A7V3KCF3_9DELT8.520e-14053.59Type II secretion system protein E n=1 Tax=Deltapr... [more]
F3YYC9_DESAF5.610e-13952.58Type II secretion system protein E n=3 Tax=Desulfo... [more]
A0A7C5L7W6_AQUAO1.250e-13852.43Type II/IV secretion system protein n=1 Tax=Aquife... [more]
A0A7C5YLX9_9DELT1.100e-13751.67Type II secretion system protein E n=1 Tax=Deltapr... [more]
D3SMA7_THEAH1.430e-13752.03Type II secretion system protein E n=1 Tax=Thermoc... [more]
A0A117KZL7_9BACT6.470e-13752.58Protein-secreting ATPase n=2 Tax=Bacteria TaxID=2 ... [more]
UPI000495FD821.030e-13651.91type II secretion system ATPase GspE n=1 Tax=Perse... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19111contigP-wetherbeei_contig19111:6..1190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog690850.Desaf_1234
Preferred namegspE
PFAMsT2SSE,T2SSE_N
Model size1185
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K02454
KEGG TC3.A.15
KEGG Pathwayko03070,ko05111,map03070,map05111
KEGG ModuleM00331
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.2e-140
EggNOG OGsCOG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,42M51@68525|delta/epsilon subdivisions,2WIPP@28221|Deltaproteobacteria,2M915@213115|Desulfovibrionales
DescriptionPFAM Type II secretion system protein E
Cds size1185
COG categoryNU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186164.317572-CDS-P-wetherbeei_contig19111:5..11901683186164.317572-CDS-P-wetherbeei_contig19111:5..1190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19111 6..1190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19111.1.1prot_P-wetherbeei_contig19111.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19111 6..1190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19111.1.1

>prot_P-wetherbeei_contig19111.1.1 ID=prot_P-wetherbeei_contig19111.1.1|Name=mRNA_P-wetherbeei_contig19111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp
VFDLLKDAGGAPVVKLVNTLFLKAMEMRASDIHIEPFENETIVRLRIDGV
LHEFRRIPPKQHSEVAARLKVLSKLDLAETRRPQDGRLQIKAGQSVVDIR
LSSVPTLYGERIVMRLLEKNTKALSMDELGLLESTQTSLRDCLEHSFGMV
LVTGPTGSGKTTTLYTVLREVSSPQRNVLTIEDPVEYRMAGVGQIQVNER
IDVTFAAGLRSILRQDPDIVMVGEIRDSETANIAVNAALTGHLVLSTLHT
NDAPSAATRLIDLKVPPFLLSSCLLGVIAQRLTRRLCEQCKRQVDHEAAA
WRRLGFENVPKGTTFEPVGCPACMNTGFKGRFGVYEMMRVDEEMSSRIAR
EEDARALRSAARHKGMRSLLEDAAQKVLLGRTSLDEAVRVGRAQ*
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mRNA from alignment at P-wetherbeei_contig19111:6..1190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19111.1.1 ID=mRNA_P-wetherbeei_contig19111.1.1|Name=mRNA_P-wetherbeei_contig19111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig19111:6..1190+ (Phaeothamnion wetherbeei SAG_119_79)
GTTTTCGATCTCCTCAAAGATGCCGGGGGAGCCCCGGTCGTCAAACTCGT CAACACGCTCTTCCTCAAAGCCATGGAAATGCGCGCCTCCGACATTCACA TCGAGCCCTTCGAAAATGAAACCATCGTGCGTTTGCGCATCGACGGCGTG CTCCACGAGTTTCGCCGGATTCCGCCCAAGCAGCACTCGGAAGTCGCCGC CCGTCTCAAGGTCCTCTCCAAGCTCGACCTGGCCGAGACCCGGCGCCCTC AGGACGGCCGCCTGCAAATCAAGGCCGGCCAAAGTGTGGTGGATATCCGA CTCTCGTCGGTGCCCACGCTTTACGGGGAACGCATCGTCATGCGACTTCT CGAGAAGAACACCAAGGCGCTCTCCATGGACGAATTGGGTCTCCTGGAAT CCACGCAGACTTCCCTCCGGGACTGCCTCGAGCACTCTTTTGGAATGGTG CTGGTGACGGGTCCGACCGGTTCCGGGAAAACCACCACTCTGTATACGGT GCTGCGAGAAGTCAGTTCTCCTCAGCGCAACGTCTTGACGATCGAAGACC CGGTCGAGTATCGAATGGCGGGTGTGGGCCAAATCCAGGTCAACGAACGC ATCGACGTCACTTTCGCCGCTGGATTGCGTTCGATTCTACGCCAGGACCC CGACATCGTGATGGTCGGCGAGATCCGCGATTCGGAAACGGCCAATATCG CCGTCAATGCCGCCCTTACGGGCCATCTTGTGTTGTCCACCCTGCACACG AACGACGCCCCTTCGGCAGCCACGCGACTGATCGACCTCAAGGTGCCCCC TTTCCTGCTGTCCTCCTGCTTGCTCGGCGTTATCGCCCAGCGCCTCACGC GACGCTTGTGCGAGCAGTGCAAGCGGCAGGTCGACCACGAAGCTGCCGCC TGGCGCCGTTTGGGCTTTGAGAACGTCCCCAAAGGAACTACTTTCGAGCC GGTCGGTTGTCCCGCATGTATGAATACCGGTTTCAAAGGACGCTTCGGGG TCTACGAGATGATGCGAGTCGACGAAGAAATGTCGAGCCGCATCGCTCGC GAGGAGGACGCTCGCGCCCTGCGCTCGGCGGCCCGCCACAAAGGGATGCG CAGCCTTCTCGAGGACGCTGCCCAAAAAGTGCTGCTCGGCCGCACCAGTC TCGATGAAGCTGTGCGCGTAGGCCGGGCTCAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19111:6..1190+

>mRNA_P-wetherbeei_contig19111.1.1 ID=mRNA_P-wetherbeei_contig19111.1.1|Name=mRNA_P-wetherbeei_contig19111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig19111:6..1190+ (Phaeothamnion wetherbeei SAG_119_79)
GTTTTCGATCTCCTCAAAGATGCCGGGGGAGCCCCGGTCGTCAAACTCGT
CAACACGCTCTTCCTCAAAGCCATGGAAATGCGCGCCTCCGACATTCACA
TCGAGCCCTTCGAAAATGAAACCATCGTGCGTTTGCGCATCGACGGCGTG
CTCCACGAGTTTCGCCGGATTCCGCCCAAGCAGCACTCGGAAGTCGCCGC
CCGTCTCAAGGTCCTCTCCAAGCTCGACCTGGCCGAGACCCGGCGCCCTC
AGGACGGCCGCCTGCAAATCAAGGCCGGCCAAAGTGTGGTGGATATCCGA
CTCTCGTCGGTGCCCACGCTTTACGGGGAACGCATCGTCATGCGACTTCT
CGAGAAGAACACCAAGGCGCTCTCCATGGACGAATTGGGTCTCCTGGAAT
CCACGCAGACTTCCCTCCGGGACTGCCTCGAGCACTCTTTTGGAATGGTG
CTGGTGACGGGTCCGACCGGTTCCGGGAAAACCACCACTCTGTATACGGT
GCTGCGAGAAGTCAGTTCTCCTCAGCGCAACGTCTTGACGATCGAAGACC
CGGTCGAGTATCGAATGGCGGGTGTGGGCCAAATCCAGGTCAACGAACGC
ATCGACGTCACTTTCGCCGCTGGATTGCGTTCGATTCTACGCCAGGACCC
CGACATCGTGATGGTCGGCGAGATCCGCGATTCGGAAACGGCCAATATCG
CCGTCAATGCCGCCCTTACGGGCCATCTTGTGTTGTCCACCCTGCACACG
AACGACGCCCCTTCGGCAGCCACGCGACTGATCGACCTCAAGGTGCCCCC
TTTCCTGCTGTCCTCCTGCTTGCTCGGCGTTATCGCCCAGCGCCTCACGC
GACGCTTGTGCGAGCAGTGCAAGCGGCAGGTCGACCACGAAGCTGCCGCC
TGGCGCCGTTTGGGCTTTGAGAACGTCCCCAAAGGAACTACTTTCGAGCC
GGTCGGTTGTCCCGCATGTATGAATACCGGTTTCAAAGGACGCTTCGGGG
TCTACGAGATGATGCGAGTCGACGAAGAAATGTCGAGCCGCATCGCTCGC
GAGGAGGACGCTCGCGCCCTGCGCTCGGCGGCCCGCCACAAAGGGATGCG
CAGCCTTCTCGAGGACGCTGCCCAAAAAGTGCTGCTCGGCCGCACCAGTC
TCGATGAAGCTGTGCGCGTAGGCCGGGCTCAGTAG
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