prot_P-wetherbeei_contig1910.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1910.1.1
Unique Nameprot_P-wetherbeei_contig1910.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length91
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1910.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 16..75
e-value: 8.1E-9
score: 35.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 1..29
e-value: 0.0022
score: 16.1
coord: 31..64
e-value: 6.8E-8
score: 30.2
coord: 66..91
e-value: 3.4E-4
score: 18.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 29..63
score: 11.366925
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..91
e-value: 8.4E-27
score: 95.7
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 2..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1910contigP-wetherbeei_contig1910:1..581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1910.1.1mRNA_P-wetherbeei_contig1910.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1910 1..581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1910.1.1 ID=prot_P-wetherbeei_contig1910.1.1|Name=mRNA_P-wetherbeei_contig1910.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp
IHSCEKVGDWQRAVTLLEEMRAEHGLMPDQYTYAGAISACGKGGQVDRAL
ALLVRMRGEGVEPNLHCYNAAINACRLAGRWEKAAAMLDVM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf