prot_P-wetherbeei_contig19084.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19084.1.1
Unique Nameprot_P-wetherbeei_contig19084.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length249
Homology
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1F4DFH6_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DFH6_9PROT)

HSP 1 Score: 312 bits (800), Expect = 7.450e-105
Identity = 156/245 (63.67%), Postives = 187/245 (76.33%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A ++R +G+PAFVLHSYPFRETSLII+ FT + GRVALVARGARRP+S LRGVLLAFQPLLLSW G+ ELRTLHKAEWQGG   L G  ++CGFYLNEL+LKLL RDD HE L+  Y  TL AL +G +HA TLR FE+  L+E GY L LD D  SG  I A+  Y Y++DRGPV+   DG   G     +EL+GQTL+D+  D Y++ +TQQQSK LMR LINHCLG+QTL+TRQLL+D+Q L
Sbjct:    5 ADKSRQDGQPAFVLHSYPFRETSLIIQTFTSDLGRVALVARGARRPKSALRGVLLAFQPLLLSWSGRTELRTLHKAEWQGGHAPLKGLAVICGFYLNELLLKLLPRDDPHERLFVVYRETLEALGSGTEHAATLRRFEKSLLQELGYGLMLDRDAESGTPIAAEARYTYVIDRGPVVHHDDGSQNG-----VELSGQTLIDLQSDNYANAVTQQQSKTLMRALINHCLGDQTLHTRQLLRDLQAL 244          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1F4DHX2_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DHX2_9PROT)

HSP 1 Score: 308 bits (790), Expect = 2.230e-103
Identity = 154/243 (63.37%), Postives = 185/243 (76.13%), Query Frame = 0
Query:    6 RARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            ++RH+G+PAFVLHSYPFRETSLI+E+FTR+ GRVALVARGARRP+S L GVLLAFQPLLLSW GK +LRTLHKAEW+GG   L G  L+CGFYLNEL+LKLL RDD HE L+  Y  TL AL    DHAVTLR FE+  L+E GY L LD D  +G  IRA+ +Y Y+++RGPV+   D    G     +EL GQTL+DM  D+Y+S  + QQSK LMR LINH LGN+TL+TRQLL+D+Q L
Sbjct:    4 KSRHDGQPAFVLHSYPFRETSLIVESFTRDRGRVALVARGARRPKSTLHGVLLAFQPLLLSWSGKMDLRTLHKAEWEGGYTPLKGLSLICGFYLNELLLKLLPRDDPHEQLFAVYRETLEALGRNDDHAVTLRRFEKNLLRELGYGLMLDRDAETGAPIRAELSYTYVMERGPVVQRGDAARNG-----VELTGQTLIDMQSDDYASAASLQQSKLLMRALINHHLGNKTLHTRQLLRDLQAL 241          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A4R3YDM8_9PROT (DNA repair protein RecO n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3YDM8_9PROT)

HSP 1 Score: 303 bits (776), Expect = 3.320e-101
Identity = 154/247 (62.35%), Postives = 190/247 (76.92%), Query Frame = 0
Query:    1 MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQ 247
            M +  +++ E +PA+VLHSYPFRETSLI+E F+RN+GR+A+VARGARRP+S +RG+L+AFQPL L+W GKAEL+TLH AEWQGG PQL G  LLCGFYLNELMLKLL RDD HE L+  Y  TL +L++  D+A  LR FE + L+E GYALT  +DV SGE+I  D  YHY ++ GPV+A  +G      G  ++L+G+TLLDMA D Y  PLT QQSK LMR LINH LG+QTL+TRQLLKDMQQ
Sbjct:    1 MGNTQKSQQEAQPAYVLHSYPFRETSLIVEVFSRNFGRLAIVARGARRPKSAVRGLLMAFQPLQLNWFGKAELKTLHSAEWQGGQPQLQGMALLCGFYLNELMLKLLHRDDPHENLFMYYQETLQSLASQRDYAAVLRRFEIRLLQELGYALTFVNDVSSGESIVPDREYHYQIEYGPVVA--EGRNSHQIG--VQLSGKTLLDMAADNYRDPLTLQQSKTLMRTLINHYLGDQTLHTRQLLKDMQQ 243          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A3N5WRZ8_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WRZ8_9PROT)

HSP 1 Score: 300 bits (767), Expect = 6.980e-100
Identity = 153/248 (61.69%), Postives = 182/248 (73.39%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPV---LAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A RAR +G+PA++LH+YP+RETSL+ E +TR+ GRVAL+ARGARRPRS LRGVL+AFQPLLL W GKAEL+TLHKAEWQGG   L G  L+CGFYLNEL+LKLL R+D HE L+E Y   L  L +  DHA  LR FE+  L+E GY L LD +V+ G  I     Y Y+ +RGPV   LAA   G        +ELAGQTL+DMA D Y+ P T QQSKALMR LINHCLG QTL+TRQLL+D+QQL
Sbjct:    2 AERARRDGQPAYLLHTYPYRETSLVAEIYTRDAGRVALIARGARRPRSALRGVLMAFQPLLLGWSGKAELKTLHKAEWQGGYLPLRGLSLICGFYLNELLLKLLPREDPHERLFEAYADALAQLPHAQDHAAVLRRFERVLLRELGYGLVLDREVVGGTPIEPATRYCYVPERGPVPAGLAAAQSG--------VELAGQTLIDMAVDHYADPQTVQQSKALMRALINHCLGRQTLHTRQLLRDLQQL 241          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A0S8CAS3_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CAS3_9PROT)

HSP 1 Score: 295 bits (756), Expect = 3.510e-98
Identity = 148/248 (59.68%), Postives = 183/248 (73.79%), Query Frame = 0
Query:    1 MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            M+  G+ R + +P FVLHSYPFRETSL++E FTR++GR+ALVARGARRPRS LRGVLL+FQPLLLSW G++ELRTL +AEWQG    L G  L+CGFYLNEL+LKLL RDD HE L+  Y ATL AL+   +H   LR FE Q L+E GYA+ LD D  +G+ I  D  Y Y+++RGPV A         +GK +ELAGQTLLDM   ++ S +TQQQSKALMR LINH LG Q L+TRQ+L+++Q L
Sbjct:    1 MSTRGQVRQDAQPGFVLHSYPFRETSLVVETFTRDHGRIALVARGARRPRSSLRGVLLSFQPLLLSWTGRSELRTLTRAEWQGAYTALRGETLMCGFYLNELLLKLLPRDDPHERLHGIYQATLAALAADAEHESILRRFELQLLRELGYAVMLDRDAETGDVIHPDQRYVYVVERGPVAAETSA-----SGKGVELAGQTLLDMQSSKFDSAVTQQQSKALMRALINHYLGKQVLHTRQMLRELQDL 243          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A7V8ZNQ2_9BURK (DNA repair protein RecO n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZNQ2_9BURK)

HSP 1 Score: 295 bits (754), Expect = 1.170e-97
Identity = 152/256 (59.38%), Postives = 187/256 (73.05%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDG-----------GGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A +AR + + AFVLH+YPFRETSL+IE F R+ GRVALVARGARRP+S LRG LLAFQPL LSW GK ELRTLH+AEW GGLP L G  L+CGFYLNEL+LKLLARDD H  L+++Y+A L  L+  G+ A  LR FE++FL+E GYALTL  D  +G TI AD  Y Y+++RG +  A  G           G GG     +E++G+TLLDMARD+YS   T QQSK LMR +I+H LG Q+LNTRQL+KD++QL
Sbjct:    3 ADKARQDAQTAFVLHTYPFRETSLVIEIFARDAGRVALVARGARRPKSALRGALLAFQPLALSWFGKNELRTLHRAEWLGGLPMLHGEALICGFYLNELLLKLLARDDPHPLLFDSYHAALQELAGAGEVAPILRRFEKRFLQELGYALTLTRDARNGATIEADRQYAYVMERGALPVAPAGVREKKVESVGPGTGGGKPPLVEISGKTLLDMARDDYSDATTLQQSKLLMRAIIDHYLGAQSLNTRQLMKDLRQL 258          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: UPI001BBF2BE0 (DNA repair protein RecO n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BBF2BE0)

HSP 1 Score: 293 bits (751), Expect = 1.820e-97
Identity = 148/244 (60.66%), Postives = 180/244 (73.77%), Query Frame = 0
Query:    6 RARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAA--RDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQ 247
            ++R E +P FVLH+YPFRETSL++E F+ N+GR+ALVARGARRPRS +RG+LLAFQPL L+W GK+ELRTLH AEWQGG P L G  L+CGFYLNEL+LKLL RDD HE L+  Y  TL  L+   DHA  LR FE + LKE GYALTLDH+V SG  + A+  Y Y  DRGP+L A  RDG         ++L G+TLLDMA D+Y  P TQQQSK LMR L+NH LG Q L+TRQ+LK++ +
Sbjct:    5 KSRQENQPVFVLHTYPFRETSLVVEVFSLNFGRLALVARGARRPRSAVRGLLLAFQPLSLAWFGKSELRTLHAAEWQGGQPLLQGNALICGFYLNELLLKLLPRDDPHEQLFLYYRDTLLELARDPDHAAVLRRFETRLLKELGYALTLDHEVESGTPLEAEQTYTYAFDRGPLLRAAPRDG---------VQLRGKTLLDMAADDYRDPATQQQSKMLMRALLNHYLGEQILHTRQMLKELAE 239          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A4V0X9K8_9PROT (DNA repair protein RecO n=1 Tax=Nitrosomonadaceae bacterium TaxID=2026767 RepID=A0A4V0X9K8_9PROT)

HSP 1 Score: 293 bits (751), Expect = 1.950e-97
Identity = 143/245 (58.37%), Postives = 185/245 (75.51%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A + R + EPAFVLH+YP+ ETSL++E FTRN+GR+ ++A+GA+RPRS LRG+LLAFQPL LSW GK+ELRTLHK EWQGG P L G  L+CGFYLNEL+++LL R+D HE L+E Y  TL ALS+  D+   LR FEQ+ LKE GYALTL +DV + + + A   Y Y ++RGP +      G GD  + L+L+G+TLLDM   +YS  +T+QQSKALMR ++NH LG+Q L+TRQLLKD+QQL
Sbjct:    3 ANKYRQDTEPAFVLHAYPYLETSLVVETFTRNFGRIPMIAKGAKRPRSALRGLLLAFQPLHLSWAGKSELRTLHKVEWQGGQPSLQGMALICGFYLNELLVRLLRREDPHEQLFEYYQETLIALSSQQDYTPILRHFEQRMLKELGYALTLSYDVTTNKPLNAQEKYCYEIERGPKIL-----GAGDCSRGLQLSGRTLLDMETGDYSDSITRQQSKALMRYILNHYLGDQPLHTRQLLKDLQQL 242          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: UPI0019ADB0ED (DNA repair protein RecO n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019ADB0ED)

HSP 1 Score: 293 bits (750), Expect = 5.260e-97
Identity = 154/259 (59.46%), Postives = 186/259 (71.81%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGG------------GGGDAGKRL--ELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A RAR + + AFVLHSYPFRETSL+ E F R+ GR+ALVARGARRP+S LRG LLAFQPL LSW GK ELRTLH+AEW GGLP L G  L+CGFYLNEL+LKLLARDD H  L++TY   L  L+  G++A  LR FE++ L+E GYALTL HD  +G  I AD  Y Y+++RG +  A D G            GG   GK L  E++G+TLLDMA D+YS  LT QQSK LMR +I+H LG Q+LNTRQL+KD++QL
Sbjct:    3 ADRARQDAQTAFVLHSYPFRETSLVAEIFARDAGRIALVARGARRPKSALRGSLLAFQPLALSWFGKNELRTLHRAEWLGGLPMLHGEALICGFYLNELLLKLLARDDPHPLLFDTYRDALQELAGAGEYAPILRRFEKRLLQELGYALTLTHDARNGAEIEADRQYTYVMERGAMPVAPDDGKEKKVESGGLELGGKAGGKPLLVEVSGKTLLDMAHDDYSDELTLQQSKLLMRAIIDHYLGAQSLNTRQLMKDLRQL 261          
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1G4XJR5_9PROT (DNA repair protein RecO n=5 Tax=Nitrosospira TaxID=35798 RepID=A0A1G4XJR5_9PROT)

HSP 1 Score: 290 bits (743), Expect = 3.200e-96
Identity = 146/245 (59.59%), Postives = 184/245 (75.10%), Query Frame = 0
Query:    4 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 248
            A + R + +PAFVLH+YP+ ETSL++EAFTRN+GRV LVA+GA+RP+S  RG+L AFQPL LSWGGK ELRTLHKAEWQ G   L G GL+CGFYLNEL+++LL R+D HE L+  Y   L ALSNG D+   LR FEQ+ L+E GYALTLDHD  SG  I A+ +Y Y ++RGPV +      G    + L+L G+TLLDM R +YS  LT+QQSKALMR ++NH LG++ L+TRQLLK++QQL
Sbjct:    3 ADKQRQDAQPAFVLHTYPYLETSLVVEAFTRNFGRVPLVAKGAKRPKSAFRGLLRAFQPLQLSWGGKTELRTLHKAEWQAGQMPLQGTGLICGFYLNELLVRLLHRNDPHEQLFIYYQEALSALSNGKDYIPILRRFEQRLLQELGYALTLDHDAASGNPIDANEDYCYEIERGPVPS-----NGHRCDQGLQLGGKTLLDMERGDYSDTLTRQQSKALMRYILNHYLGDKPLHTRQLLKNLQQL 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4DFH6_9PROT7.450e-10563.67DNA repair protein RecO n=1 Tax=Betaproteobacteria... [more]
A0A1F4DHX2_9PROT2.230e-10363.37DNA repair protein RecO n=1 Tax=Betaproteobacteria... [more]
A0A4R3YDM8_9PROT3.320e-10162.35DNA repair protein RecO n=1 Tax=Sulfurirhabdus aut... [more]
A0A3N5WRZ8_9PROT6.980e-10061.69DNA repair protein RecO n=1 Tax=Betaproteobacteria... [more]
A0A0S8CAS3_9PROT3.510e-9859.68DNA repair protein RecO n=1 Tax=Betaproteobacteria... [more]
A0A7V8ZNQ2_9BURK1.170e-9759.38DNA repair protein RecO n=1 Tax=Burkholderiales ba... [more]
UPI001BBF2BE01.820e-9760.66DNA repair protein RecO n=1 Tax=Sulfuricella sp. T... [more]
A0A4V0X9K8_9PROT1.950e-9758.37DNA repair protein RecO n=1 Tax=Nitrosomonadaceae ... [more]
UPI0019ADB0ED5.260e-9759.46DNA repair protein RecO n=1 Tax=Burkholderiales ba... [more]
A0A1G4XJR5_9PROT3.200e-9659.59DNA repair protein RecO n=5 Tax=Nitrosospira TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 9..82
e-value: 3.6E-25
score: 89.6
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 12..82
IPR042242Recombination protein O, C-terminalGENE3D1.20.1440.120coord: 87..247
e-value: 7.3E-40
score: 138.5
IPR003717Recombination protein O, RecOPFAMPF02565RecO_Ccoord: 91..230
e-value: 1.5E-16
score: 60.5
IPR003717Recombination protein O, RecOTIGRFAMTIGR00613TIGR00613coord: 14..162
e-value: 3.2E-25
score: 86.9
IPR003717Recombination protein O, RecOPANTHERPTHR33991DNA REPAIR PROTEIN RECOcoord: 9..247
IPR003717Recombination protein O, RecOHAMAPMF_00201RecOcoord: 8..245
score: 21.53237
IPR022572DNA replication/recombination mediator RecO, N-terminalPFAMPF11967RecO_Ncoord: 13..81
e-value: 5.9E-20
score: 71.0
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 94..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19084contigP-wetherbeei_contig19084:17..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19084.1.1mRNA_P-wetherbeei_contig19084.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19084 17..1308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19084.1.1 ID=prot_P-wetherbeei_contig19084.1.1|Name=mRNA_P-wetherbeei_contig19084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPR
SVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLN
ELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGY
ALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQ
TLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR042242RecO_C
IPR003717RecO
IPR022572DNA_rep/recomb_RecO_N
IPR037278ARFGAP/RecO