mRNA_P-wetherbeei_contig19043.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: W7WU39_9BURK (Nucleoid occlusion protein n=2 Tax=unclassified Methylibium TaxID=2633235 RepID=W7WU39_9BURK) HSP 1 Score: 317 bits (811), Expect = 5.500e-106 Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1
Query: 235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQA+VPSRWANRHP SFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA
Sbjct: 1 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAVVPSRWANRHPASFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 160
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: UPI001CEC4022 (ParB/RepB/Spo0J family partition protein n=1 Tax=Ideonella sp. B7 TaxID=2831643 RepID=UPI001CEC4022) HSP 1 Score: 277 bits (709), Expect = 1.370e-89 Identity = 155/230 (67.39%), Postives = 169/230 (73.48%), Query Frame = 1
Query: 37 MSTKSKLLAMTENLLLPEDLPAAPEVQLA--APA--PTPTEGQPAGIAQQPPPKFPPVPTGGAPKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
MSTK+KLLAMT L PA P V A APA P P EG P KFP + G AP+TGPGQMLQFRGQMLA+EGEL K R L+ HEGSTPTR +DP I SRWANRHPD+F+ EF LKQDI AGGNVQPI VR Q GRYE+VFGHRRHRAC ELG+PVLA + TS +SD ELF+AMDRENRERADLSPYEQGTMYRRALD LYPSNRR+AEA
Sbjct: 1 MSTKNKLLAMTMGLDPMAQAPAEPAVSRAPGAPAILPPPAEGS------LPAQKFPQLGPGSAPRTGPGQMLQFRGQMLAIEGELAKARSELQLHEGSTPTRLIDPALIDGSRWANRHPDAFNRPEFESLKQDIAHAGGNVQPILVRQAAGQEGRYEVVFGHRRHRACLELGVPVLAMVTTSPLSDAELFAAMDRENRERADLSPYEQGTMYRRALDAGLYPSNRRMAEA 224
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A3S2TIQ8_9BURK (ParB/RepB/Spo0J family partition protein n=3 Tax=Burkholderiales genera incertae sedis TaxID=224471 RepID=A0A3S2TIQ8_9BURK) HSP 1 Score: 273 bits (699), Expect = 5.490e-89 Identity = 134/160 (83.75%), Postives = 145/160 (90.62%), Query Frame = 1
Query: 235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
MLQFRGQMLAVEGELGKLR+RLKEHEGS PTRKLDP IVPSRWANRH DSF A+F RLKQDIE+AGGNVQPI+VR L +Q GRYEIVFGHRRHRACSELG+PVLA ++T+ +DHELFSAMDRENRERADLSP+EQGTMYRRALD LYPSNRRLAEA
Sbjct: 1 MLQFRGQMLAVEGELGKLRERLKEHEGSVPTRKLDPACIVPSRWANRHADSFGNADFLRLKQDIEVAGGNVQPIAVRPLPEQAGRYEIVFGHRRHRACSELGLPVLAMVETAPFTDHELFSAMDRENRERADLSPFEQGTMYRRALDAGLYPSNRRLAEA 160
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A286HGC8_9BURK (Chromosome partitioning protein, ParB family n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A286HGC8_9BURK) HSP 1 Score: 266 bits (681), Expect = 2.410e-85 Identity = 144/226 (63.72%), Postives = 167/226 (73.89%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE PAA P AP PT G A + +FPP T AP+TGPGQML FRGQM AVEGEL LR+RL +H+GSTPTRKLDP I SRWANRHP SF AEFA LK D+E AGGNVQPI VR + D+PG+YE+VFGHRRHRAC ELGIPVLA I + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPAPAAAPASNSTAPVPTTLPGAAAAVET----RFPPAQTSQFAPRTGPGQMLAFRGQMQAVEGELTALRERLHQHDGSTPTRKLDPATIRASRWANRHPASFENAEFAGLKADVEQAGGNVQPILVRPVADEPGQYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 224
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A429WFS6_9BURK (ParB/RepB/Spo0J family partition protein n=1 Tax=Variovorax sp. MHTC-1 TaxID=2495593 RepID=A0A429WFS6_9BURK) HSP 1 Score: 263 bits (673), Expect = 3.910e-84 Identity = 144/226 (63.72%), Postives = 165/226 (73.01%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE PAA P A P G A + +FPP G AP+TGPGQML FRGQM AVEGEL LR+RL++H+GSTPTRKLDP+ I SRWANRH DSF AEFA LK DIE AGGNVQPI VR DQPG YE+VFGHRRHRAC ELGIPVLA I + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPAPAAAPASNGTAAIPPALPGAAAAVET----RFPPAQAGQLAPRTGPGQMLAFRGQMQAVEGELAALRERLRQHDGSTPTRKLDPKTISASRWANRHRDSFENAEFAGLKADIEQAGGNVQPILVRPAADQPGHYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 224
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A840G0E0_9BURK (ParB family chromosome partitioning protein n=1 Tax=Variovorax guangxiensis TaxID=1775474 RepID=A0A840G0E0_9BURK) HSP 1 Score: 263 bits (671), Expect = 8.070e-84 Identity = 142/227 (62.56%), Postives = 168/227 (74.01%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAA--PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE +PAA P + AP P P + +FPP TG AP+TGPGQML FRGQM AVEGEL +R+RL +++GSTPTRKLDP I SRWANRHP SF T+EFA LK DIE AGGNVQPI VR L D+PGRYE+VFGHRRHRAC +LGIPVLA I + D ELF+AMDRENRER+DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPVPAAAAPVAHIPAPPVLPGVAAPPVVET----RFPPAQTGTIAPRTGPGQMLAFRGQMQAVEGELAAMRERLLQYDGSTPTRKLDPTMIRASRWANRHPTSFETSEFAALKADIEQAGGNVQPILVRALADEPGRYELVFGHRRHRACLDLGIPVLAAIWLDELGDIELFTAMDRENRERSDLSAYEQGVMYQRALDEQLFPTQRQLAE 225
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A2P1VIW8_9BURK (Chromosome partitioning protein ParB n=3 Tax=Variovorax TaxID=34072 RepID=A0A2P1VIW8_9BURK) HSP 1 Score: 259 bits (661), Expect = 2.620e-82 Identity = 139/226 (61.50%), Postives = 169/226 (74.78%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAAPEVQLAA-PAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE +PAA V ++ PAP G +A + +FPP TG AP+TGPGQML FRG L LR+RL++H+GSTPTRK+DP + PSRWANRHP SF +AEFA LK DIELAGGNVQPI VR L+D+PG+YE+VFGHRRHRAC ELGIPVLA I + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPVPAAAPVSVSTTPAPPALPGA-XXVALET--RFPPAQTGQPAPRTGPGQMLAFRGXXXXXXXXLAALRERLRQHDGSTPTRKIDPATVRPSRWANRHPASFESAEFAGLKADIELAGGNVQPILVRPLVDEPGQYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 225
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A5C1Q3V1_9BURK (ParB/RepB/Spo0J family partition protein n=2 Tax=Sphaerotilus natans TaxID=34103 RepID=A0A5C1Q3V1_9BURK) HSP 1 Score: 255 bits (651), Expect = 1.100e-81 Identity = 126/160 (78.75%), Postives = 137/160 (85.62%), Query Frame = 1
Query: 235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
MLQFRGQMLA E ELGKL++++K EG+ PTRKLDP I PSRWANRHPDSFS F RLKQDIE AGGNVQPI VR DQP RYEIVFGHRRHRACSELG+PVLA IDT+++SD ELFS MDRENRERADLSPYEQG+MYRRALD+ LY SNRRLAEA
Sbjct: 1 MLQFRGQMLATENELGKLKEQVKSFEGAAPTRKLDPHVIEPSRWANRHPDSFSNIAFLRLKQDIEQAGGNVQPILVRPRTDQPERYEIVFGHRRHRACSELGLPVLAMIDTTSISDQELFSVMDRENRERADLSPYEQGSMYRRALDQGLYVSNRRLAEA 160
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: UPI0004768576 (ParB/RepB/Spo0J family partition protein n=3 Tax=Variovorax TaxID=34072 RepID=UPI0004768576) HSP 1 Score: 257 bits (656), Expect = 1.490e-81 Identity = 145/229 (63.32%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAAPEVQLAAPAPTPTEGQPA--GIAQQPP--PKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE PA+ AAPA P P G A P +FPP TG AP+TGPGQML FRGQM AVE EL LR+RL++H+GSTPTRKLDP+ I SRWANRHP SF TA FA LK DIE AGGNVQPI VR L D+PG+YE+VFGHRRHRAC +LGIPVLA I + D ELF+AMDRENRER DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPAPAS-----AAPA-APVAVAPVFPGAAASAPMETRFPPAQTGTMAPRTGPGQMLAFRGQMQAVEXELAALRERLQQHDGSTPTRKLDPKTIRASRWANRHPASFETAAFAALKADIEQAGGNVQPILVRALPDEPGQYELVFGHRRHRACLDLGIPVLAAIWVDELGDIELFTAMDRENRERTDLSAYEQGVMYQRALDEQLFPTQRQLAE 225
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A1H7YEC0_9BURK (Chromosome partitioning protein, ParB family n=2 Tax=Variovorax TaxID=34072 RepID=A0A1H7YEC0_9BURK) HSP 1 Score: 255 bits (652), Expect = 6.160e-81 Identity = 141/226 (62.39%), Postives = 164/226 (72.57%), Query Frame = 1
Query: 40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
ST+ +L A+T L +PE PAA P P G A A + +FPP T AP+TGPGQML FRGQM AVEGEL LRDRL++H+GSTPTRKLDP I SRWANRH SF TAEFA LK DIE AGGNVQPI VR + +PG+YE+VFGHRRHRAC +LGIPVLA I + D ELF+AMDRENRER+DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct: 3 STRKRLEALTAGLSIPEPTPAAAPTAHAIIAPPASLPGVAAAHAVET--RFPPAQTSSLAPRTGPGQMLAFRGQMQAVEGELAALRDRLRQHDGSTPTRKLDPAIIRASRWANRHSASFETAEFAGLKADIEQAGGNVQPILVRPVAGEPGQYELVFGHRRHRACLDLGIPVLAAIWLDELGDIELFTAMDRENRERSDLSAYEQGVMYQRALDEQLFPTQRQLAE 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19043.2.1 >prot_P-wetherbeei_contig19043.2.1 ID=prot_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp MATRLPQKKGAEMSTKSKLLAMTENLLLPEDLPAAPEVQLAAPAPTPTEGback to top mRNA from alignment at P-wetherbeei_contig19043:597..1310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19043.2.1 ID=mRNA_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig19043:597..1310+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19043:597..1310+ >mRNA_P-wetherbeei_contig19043.2.1 ID=mRNA_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig19043:597..1310+ (Phaeothamnion wetherbeei SAG_119_79)back to top |