mRNA_P-wetherbeei_contig19042.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A1F2ZTR9_9PROT (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZTR9_9PROT) HSP 1 Score: 340 bits (873), Expect = 8.490e-117 Identity = 171/195 (87.69%), Postives = 183/195 (93.85%), Query Frame = 2
Query: 128 TVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
TV+NKV VL+LQHPQEQDHALGTAGLL +TL A+LA+GLSWRNLGHAL EPVEA WGVLYLGSAHA GQGPL+AVDRKGETL NQEM LSGLKGLVVLDGNWAQAKALWWRNAWL KLRRFVV+PDGPSLYGNLR+EARPDAVSTLEAVALALSA+EE PNVREK+LAPFREL+AKARAAG+QGGKRDRRRRR
Sbjct: 7 TVENKVRVLILQHPQEQDHALGTAGLLVQTLVHAQLAVGLSWRNLGHALKEPVEACDWGVLYLGSAHATGQGPLVAVDRKGETLANQEMALSGLKGLVVLDGNWAQAKALWWRNAWLTKLRRFVVMPDGPSLYGNLRKEARPDAVSTLEAVALALSALEEDPNVREKVLAPFRELVAKARAAGLQGGKRDRRRRR 201
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A521M6Z0_9HYPH (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M6Z0_9HYPH) HSP 1 Score: 328 bits (842), Expect = 4.460e-112 Identity = 164/195 (84.10%), Postives = 177/195 (90.77%), Query Frame = 2
Query: 128 TVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
TV+NKV VL+LQHPQEQDHALGTAGLL TLA A+LA+GLSWRNLGHALGEP E R WGVLYLGSAHA GQ PL+AVDRKGE LP+Q+ L+GLKGLVVLDGNWAQAKALWWRNAWL KLRRFVVVPDGPSLYGNLR+EARPDAVSTLEAVALALSAVE +RE++LAPFRELI KARAAG+QGGKRDRRRRR
Sbjct: 7 TVENKVRVLILQHPQEQDHALGTAGLLAATLAHARLAVGLSWRNLGHALGEPAEVRDWGVLYLGSAHAAGQRPLVAVDRKGEMLPDQDAALAGLKGLVVLDGNWAQAKALWWRNAWLTKLRRFVVVPDGPSLYGNLRKEARPDAVSTLEAVALALSAVETDKTIRERLLAPFRELITKARAAGIQGGKRDRRRRR 201
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A521LU58_9HYPH (tRNA-uridine aminocarboxypropyltransferase (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LU58_9HYPH) HSP 1 Score: 300 bits (767), Expect = 3.610e-100 Identity = 152/202 (75.25%), Postives = 169/202 (83.66%), Query Frame = 2
Query: 107 YTSAMSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
Y +AM TVDNKVTVL+LQHPQEQD LGTAGL+ TL +A+L +GLSWRNL HAL EP EA+ WGVLYLGS HA G+GPL+AVDRKGE L +Q L+GLKGLV LDGNWAQAKALWWRNAWL +LRRFVVVPDGPSLYGNLR+EARPDAVSTLEAVALAL +E VRE +L PFREL+AKARAAGV+ KRDRR RR
Sbjct: 33 YIAAMPGTVDNKVTVLILQHPQEQDRVLGTAGLIAETLGNARLVVGLSWRNLAHALKEPAEAKDWGVLYLGSTHAKGKGPLVAVDRKGEPLADQADGLAGLKGLVALDGNWAQAKALWWRNAWLTRLRRFVVVPDGPSLYGNLRREARPDAVSTLEAVALALQTLEGDAAVREALLTPFRELLAKARAAGVRDSKRDRRVRR 234
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A521QIN8_9HYPH (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QIN8_9HYPH) HSP 1 Score: 291 bits (744), Expect = 3.310e-97 Identity = 147/198 (74.24%), Postives = 166/198 (83.84%), Query Frame = 2
Query: 119 MSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
MSE VDNKV++LVLQHPQEQD LGTA L+ TLA+AK+ IGLSWRNL HA+ EP EA+ WGVLYLGS HA G+ PL+AVDRKGE L +Q L+GLKGL+ LDGNWAQAKALWWRN WL KLRRFVVVPDGPSLYG+LR+EARPDAVSTLEAVALAL +E VRE++L PFREL+AKARAAGV+ KRDRR RR
Sbjct: 1 MSEPVDNKVSILVLQHPQEQDRVLGTARLIAATLANAKVVIGLSWRNLAHAVKEPAEAKDWGVLYLGSTHAKGRAPLVAVDRKGEPLADQAAGLAGLKGLIALDGNWAQAKALWWRNPWLTKLRRFVVVPDGPSLYGDLRREARPDAVSTLEAVALALQVLEGDAAVRERLLLPFRELLAKARAAGVRDSKRDRRSRR 198
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A521R1V1_9HYPH (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521R1V1_9HYPH) HSP 1 Score: 290 bits (741), Expect = 1.050e-96 Identity = 146/200 (73.00%), Postives = 164/200 (82.00%), Query Frame = 2
Query: 113 SAMSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
SAMSETVDNKV++LVLQHPQEQD LGTA LLC +LA A++ +GLSWRNL HALGEP E R WGVLYLGS A GQGPL+AV R GE LP+Q +GLKGL+ LDGNWAQAKALWWRN WL +LRRFVVVPDGPSLYG+LR+EARPDAVSTLEAVAL+L +E VREK+L PFR L+AKAR GV+ KRDRR RR
Sbjct: 2 SAMSETVDNKVSILVLQHPQEQDRVLGTARLLCGSLAHARVVVGLSWRNLAHALGEPAEPRDWGVLYLGSTQAKGQGPLVAVGRNGEPLPDQAAARAGLKGLIALDGNWAQAKALWWRNPWLTRLRRFVVVPDGPSLYGDLRREARPDAVSTLEAVALSLQVLERDAAVREKLLEPFRALLAKARREGVRDSKRDRRVRR 201
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A259MNC7_9PROT (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MNC7_9PROT) HSP 1 Score: 278 bits (712), Expect = 2.520e-92 Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 2
Query: 119 MSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQ-GPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
MS+TVDNKV++LVLQHPQEQD LGTA LLC +LA+ ++ IGLSWRNL HALGE E R WGVLYLGS GQ PL+A+D KG+ LP+QE +GLKGL+ LDGNWAQAKALWWRNAWL KLRRFVVVPDGPSLYG+LR+EARPDAVSTLEAVAL+L +E VREK+L PFR L+AKAR GV+ KRDRR RR
Sbjct: 1 MSQTVDNKVSILVLQHPQEQDRVLGTARLLCDSLANGRVVIGLSWRNLAHALGEAAEPRDWGVLYLGSTQTKGQTSPLVAIDGKGQPLPDQEEARAGLKGLIALDGNWAQAKALWWRNAWLTKLRRFVVVPDGPSLYGDLRREARPDAVSTLEAVALSLQVLEGDAAVREKLLVPFRALLAKARQEGVRDSKRDRRVRR 199
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: UPI001C235C2F (DTW domain-containing protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C235C2F) HSP 1 Score: 278 bits (712), Expect = 2.790e-92 Identity = 144/202 (71.29%), Postives = 163/202 (80.69%), Query Frame = 2
Query: 119 MSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGS----AHAVGQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
MS+ VDNKVT+LVLQHPQEQD LGTAGLL L++AK+ +GLSWRNL HA G P E R+WGVLYLGS A A GQ PL+AVD KG LP+QE +GL+GL+ LDGNWAQAKALWWRNAWL KLRRFVVVPDGPSLYG+LR+EARPDAVSTLEAVAL+L +E VREK+LAPFR L+AKAR GV+ KRDRR RR
Sbjct: 1 MSQPVDNKVTILVLQHPQEQDRVLGTAGLLAGALSNAKVVVGLSWRNLAHAAGAPAEPRNWGVLYLGSTQTKAPANGQAPLVAVDSKGAVLPDQEAARAGLRGLIALDGNWAQAKALWWRNAWLTKLRRFVVVPDGPSLYGDLRREARPDAVSTLEAVALSLQVLEGDVAVREKLLAPFRALLAKARLEGVRDSKRDRRVRR 202
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A1T4RXN6_9HYPH (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RXN6_9HYPH) HSP 1 Score: 277 bits (709), Expect = 8.260e-92 Identity = 146/203 (71.92%), Postives = 164/203 (80.79%), Query Frame = 2
Query: 119 MSE-TVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAV----GQGPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
MSE +VDNKV VL+LQHPQEQD LGTA L+ TLA A++A+GLSWRNLGHAL P E + WGVLYLGSAH G+GPLIA+DRKGE L +Q G+KGLV LDGNWAQAKALWWRN WL KL RFVVVPDGPSLYG+LR+EARPDAVSTLEAVALALS +E VREK+LAPFR L+AKARAAG++ KRDRR RR
Sbjct: 1 MSEPSVDNKVAVLILQHPQEQDRVLGTAKLIVSTLAQAQVAVGLSWRNLGHALKAPAEPKEWGVLYLGSAHTAKEMKGKGPLIALDRKGEPLADQAAARQGIKGLVALDGNWAQAKALWWRNPWLTKLHRFVVVPDGPSLYGDLRKEARPDAVSTLEAVALALSVLEGDAAVREKMLAPFRALLAKARAAGIRDSKRDRRVRR 203
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: A0A6N6ZRU4_9PROT (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZRU4_9PROT) HSP 1 Score: 274 bits (701), Expect = 1.190e-90 Identity = 142/199 (71.36%), Postives = 160/199 (80.40%), Query Frame = 2
Query: 119 MSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQ-GPLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
M++ VDNKVT+LVLQHPQEQDH LGTAGLL +LA+AK+ +GLSWRNL HALG P E R WGVLYLGS GQ PL+A+D KG L +QE GLKGL+ LDGNWAQAKALWWRNAWL KLRRFVV+PDGPSLYG+LR+EARPDAVSTLEAVALAL +E VREK+L PFR L+AKAR GV+ KRDRR RR
Sbjct: 1 MTQPVDNKVTILVLQHPQEQDHVLGTAGLLAGSLANAKVVVGLSWRNLTHALGAPAEPRDWGVLYLGSTQTRGQTAPLVAIDGKGLPLADQEGARVGLKGLIALDGNWAQAKALWWRNAWLTKLRRFVVMPDGPSLYGDLRREARPDAVSTLEAVALALQVLEGDVAVREKLLVPFRALLAKARREGVRDSKRDRRVRR 199
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Match: UPI001E2F08D2 (DTW domain-containing protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E2F08D2) HSP 1 Score: 268 bits (685), Expect = 3.550e-88 Identity = 138/202 (68.32%), Postives = 157/202 (77.72%), Query Frame = 2
Query: 119 MSETVDNKVTVLVLQHPQEQDHALGTAGLLCRTLASAKLAIGLSWRNLGHALGEPVEARSWGVLYLGSAHAVGQG----PLIAVDRKGETLPNQEMELSGLKGLVVLDGNWAQAKALWWRNAWLIKLRRFVVVPDGPSLYGNLRQEARPDAVSTLEAVALALSAVEEAPNVREKILAPFRELIAKARAAGVQGGKRDRRRRR 712
MS+ VDNKV +LVLQHPQEQD LGTAGLL +LA+AK+ +GLSWRNL HA G P E R WGVLYLGS G+G PL+AV R GE L +Q +GLKGL+ LDGNWAQAKALWWRNAWL +LRRFVVVPDGPSLYG LR+EARPDAVSTLEAVAL+L +E +REK+L PFR L+AKAR GV+ KRDRR RR
Sbjct: 1 MSQPVDNKVAILVLQHPQEQDRVLGTAGLLAGSLANAKVVVGLSWRNLAHAWGAPAETRDWGVLYLGSTQVKGRGEGLGPLVAVGRTGEALADQPSARAGLKGLIALDGNWAQAKALWWRNAWLTRLRRFVVVPDGPSLYGELRREARPDAVSTLEAVALSLQVLEGDAALREKLLVPFRALLAKARREGVRDSKRDRRVRR 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19042.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19042.2.1 >prot_P-wetherbeei_contig19042.2.1 ID=prot_P-wetherbeei_contig19042.2.1|Name=mRNA_P-wetherbeei_contig19042.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp MTAPSASAGSLTTLSWIRTATDIAQAYSGGYTSAMSETVDNKVTVLVLQHback to top mRNA from alignment at P-wetherbeei_contig19042:458..1172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19042.2.1 ID=mRNA_P-wetherbeei_contig19042.2.1|Name=mRNA_P-wetherbeei_contig19042.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=715bp|location=Sequence derived from alignment at P-wetherbeei_contig19042:458..1172+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19042:458..1172+ >mRNA_P-wetherbeei_contig19042.2.1 ID=mRNA_P-wetherbeei_contig19042.2.1|Name=mRNA_P-wetherbeei_contig19042.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig19042:458..1172+ (Phaeothamnion wetherbeei SAG_119_79)back to top |