mRNA_P-wetherbeei_contig19027.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19027.1.1
Unique NamemRNA_P-wetherbeei_contig19027.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: D8LMN3_ECTSI (CNOT1_TTP_bind domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 6.170e-115
Identity = 228/405 (56.30%), Postives = 271/405 (66.91%), Query Frame = 1
Query:    1 RALPQELFFSPWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDP-VVTPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGE-VLPTAPLCLEALAAALRALQG-----PAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            R +P E  +  W++RRG LS L+ A+  PP V +FA SP++Q  LEGVDP   TPN AWLSLDLV SLL L+ D ELY  VR+VF  PAY+CPE+LLLALAAVP+ AG  LR ++LSRLLPLYFRPNRN HAAALIRRLWQVN RLV QS  +AF VD +L S VY+LR+ RL+PD  + LL  +D AFAVA+A+ + GAE +  TP A  XXXXX         LDL+ W  ERL + DRE FA R+L+F+Q H   AR R+A Q   PG   GE +LPT  + LEA A  L+AL       PAAEAL +                         +   P E+IE MAN+YFQRIYT+EQSI EVI ML+RFK+SS  REQEIFACMVHNLFDEYRFFH YPEK
Sbjct:  491 RDIPFEALYMQWQNRRGHLSLLRVAILAPPQVFTFASSPSKQAPLEGVDPGAATPNGAWLSLDLVASLLSLANDTELYAQVRDVFSKPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNKHAAALIRRLWQVNARLVVQSGVKAFNVDSTLPSVVYVLRIMRLVPDCAAELLGADDCAFAVAVASVVFGAE-LPPTPNAPQXXXXXPP-------LDLDKWGAERLGRKDREVFAARVLSFVQLHFPTARMRQAAQK--PGETPGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLN-PPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEK 884          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 1.540e-110
Identity = 221/407 (54.30%), Postives = 265/407 (65.11%), Query Frame = 1
Query:    1 RALPQELFFSPWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDP-VVTPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAE--PIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGE-VLPTAPLCLEALAAALR-----ALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            R +P E  +  W++RRG LS L+ A+  PP V +FA SP++Q  L+GVDP   TPN AWLSLDLV SLL L+ D ELY  VR+VF  PAY+CPE+LLLALAAVP+ AG  LR ++LSRLLPLYFRPNRN HAAALIRRLWQVN RLV QS  +AF VD +L S VY+LR+ RL+PD  + LL  +D AFAVA+A+ + GAE  P   +P           X      LDL+ W  ERL + DRE FA R+L+F+Q H   AR R+A Q   PG   GE +LPT  + LEA A  L+      L  PAAEAL +                         +   P E+IE MAN+YFQRIYT+EQSI EVI ML+RFK+SS  REQEIFACMVHNLFDEYRFFH YPEK
Sbjct:  519 RDIPSEALYMQWQNRRGHLSLLRVAILAPPQVFTFASSPSKQAPLDGVDPNAATPNGAWLSLDLVASLLSLANDTELYAQVRDVFSKPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNKHAAALIRRLWQVNARLVVQSGVKAFNVDSTLPSVVYVLRIMRLVPDCAAELLGADDCAFAVAVASVVFGAELPPTPNSP----------QXXXXXXXLDLDKWGAERLGRKDREVFAARVLSFVQLHFPTARMRQAAQK--PGETPGEGMLPTCAMSLEAAAILLKMLGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLN-PPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEK 912          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.440e-92
Identity = 221/455 (48.57%), Postives = 266/455 (58.46%), Query Frame = 1
Query:    7 LPQELFFSPWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDPVV--TPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPS-LQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGG--------------------------------------------------------PAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            LP ++ F  W +RRG LS L+A +A PP ++SFA SP RQ  LEG+D     TPNEAWLSLDLV  LL L+ D EL+ T+RE     AY CPE+LLLALAA+P  AG  LR +LL+RLLP YFRPNR     AL+RRL  VNP L   SC E F  D + L +  ++LRV+R++P+A   LL  +DA FA+ LA    GAE                  A A ER+DLEAW +ERL+++  E FA RLL+FL  + A A PR+ +QA A    +G+V  +  LC+EALAA LRA+ G    A    XXXXXXXXXXXXXXXX      A + G                                                         PA DI EMANAYFQRIYTSEQSI EV+EML+RF+AS   REQ+IFACMVHNLFDEYRFFHKYPEK
Sbjct:  428 LPPDVVFGRWANRRGHLSLLRALIAAPPQLYSFAASPQRQAALEGMDAAAAGTPNEAWLSLDLVAVLLALAADAELFATIRETLAAAAYACPELLLLALAAMPPVAGGALRKELLARLLPRYFRPNRAPLLTALLRRLHAVNPHLFRNSCEEVFHADAAGLPTLTHVLRVARVVPEALPALLGSDDAPFAICLACIAYGAE---------------RADAPARERIDLEAWASERLRREG-EPFAARLLSFLNTNVATALPRDVSQAQA-NAADGDVGISCMLCIEALAACLRAVAGLPGAAALGXXXXXXXXXXXXXXXXXRMHPAFAQLMGAVATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPASDIMEMANAYFQRIYTSEQSIPEVLEMLRRFQASDDKREQDIFACMVHNLFDEYRFFHKYPEK 865          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: W7TUR4_9STRA (Ccr4-not transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.910e-59
Identity = 158/414 (38.16%), Postives = 219/414 (52.90%), Query Frame = 1
Query:    1 RALPQELFFSPWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQ-PLLEGVDPVVTPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKD-DREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPA--------------EDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            R  P  + F PW ++ GQLS +  A+A PP + SF+G    Q PL +   P   PN+AWLS+DL+ +LL  S+   L+ + R +F  P  +CPE+L+  LA V    G KLR++LL+ L PLYF+P R+ HA A+I+R+ Q NP+L+ ++  E F+ + S      +L V  L+P  +  +L+     F VALAAA                       A   E+L+LE ++ E+L    ++E FA+  L+F+  HA  AR R A          G  +P   L  E+L + L+ L G   +  Q                        +A  G  A              + IEEMANAYFQ+IYTSEQSI +VIEML+RFK+S   +E EIFACM+ NLFDEYRFFHKYPEK
Sbjct:  417 RPFPLGVLFRPWTNKVGQLSFIHQAIAAPPDLVSFSGIGRMQNPLDDTQIPQGPPNKAWLSIDLIATLLSFSET-SLWYSARTLFDGPLRQCPEILICGLACVEDSWG-KLRSELLALLGPLYFQPGRSPHAVAVIKRVHQTNPKLLVETLVERFRQEESAAVVRDILAVMLLVPSTQQDVLSSSCTEFVVALAAA-----------------------AADKEQLNLEKFIAEKLSSSTNKENFARGTLSFVHKHAGHARLRSAVV--------GNDVPPVLLSEESLVSLLKVL-GQDPDLRQGGSQVAMEVKQALELYSKRFMEVGSANQGAGAAXXXXXXXXXXXXSDAIEEMANAYFQKIYTSEQSIPDVIEMLKRFKSSKDAKELEIFACMIRNLFDEYRFFHKYPEK 796          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A024GTE8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTE8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.890e-44
Identity = 142/406 (34.98%), Postives = 196/406 (48.28%), Query Frame = 1
Query:   31 PWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDPVVTP-NEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYF--RPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAP--LCLEALAAALRALQG-------PAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPA-------EDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPE 1191
            PW+H+R QL  LKAA+ +PP V SFA SP +    EG D    P N AW SLDLV +LL +S+  + YG VR +F  P   CP+VL+  LA     +   LR D+ S LL +Y   RPN    A  ++R LW V P  +  +  + +    S Q    L  + R   DA S  +      FA+ALA  I G+                       + L++E W+TERL    R  F    LAF+  +   A P+++            + P+    + +EAL A L+ + G       P A+ L++                          T   +       E IEE ANAYFQ+IYTSEQ+I +V+ ML+RF+ S   RE++IF CM+HNLFDEYRFF +YPE
Sbjct:  397 PWKHQRAQLGVLKAAIELPPEVLSFAESPRKLAPFEGADAAAVPKNGAWFSLDLVDTLLSISEK-DCYGKVRHIFDGPMKMCPDVLIANLAESKMKSS-NLRDDIFSELLGIYIMGRPN----APLIMRHLWSVVPNFILHASVKCYYATTSAQIISRLFTLYRTTEDAFSHAIHSNYYTFALALA--IVGSNH---------------------DVLNIETWMTERLTSQ-RVPFVTSCLAFVHRNYTRAVPKKS------------ITPSTSHLMSIEALTAILKLIVGVQSILPPPIAQELKRVITLSIEIHPIIAAGTKPRADTIKEATETASMEANVTPEMIEEQANAYFQQIYTSEQNINDVVAMLKRFQTSRDERERQIFFCMIHNLFDEYRFFPRYPE 760          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A1Z5JVQ8_FISSO (CCR4-NOT transcription complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ8_FISSO)

HSP 1 Score: 171 bits (432), Expect = 7.510e-43
Identity = 145/446 (32.51%), Postives = 222/446 (49.78%), Query Frame = 1
Query:   34 WRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGV-----DPVVTPN-EAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVP----------------AGAGPKLRADLLSRLLPLYFRPN-----RNGHAAALIRRLWQVNPRLVAQSCAEAFKV----DPSLQ--STVYLLRVSRLLP---DARSTLLAW-EDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREA-FAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAEALQQ-AXXXXXXXXXXXXXXXXXXXXXXAAMTGGPA--------------------EDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            WR+   Q S L+A VA PP V++   S N + + +        P + PN + W S++++  LL LS  P LY  VR++F+     CPEVL  +L  +                 A AG +L+ +L+  L+PL+FRPN     +NG  A  IRRL+ ++P  V  +C EA++      P ++     +++ ++RLLP   DA ++LL+  +DA +++++A  ++                         + L L+ W+ E+L      A FA  L+++L+   A A+PR        GG +G ++      LE +  +L+ L+   A  L Q                        A +T  P+                    ED+E+MA AYFQ+IYTSEQSIG+V+EML+RFK S + +E EIFACMVHNLF+EYRFF+KYPEK
Sbjct:  327 WRNPSAQFSLLEAMVASPPSVYTV--SLNEEEMADAAVAPTEGPTLAPNPDCWASMEVLQRLLHLSDVPALYRPVRDLFVRCLLSCPEVLFCSLVRLQLHVANTASSQPGGDAAASAGRQLKTELMRELIPLFFRPNPHHRVQNGPPA--IRRLYAISPTTVMAACFEAWRSVAQDSPQIRLAGIFHIINIARLLPSPADAVASLLSGNKDAEYSISIAFVMSD-----------------------NDFLQLKPWLGEKLTSKGYAAPFAFSLVSYLRKTYAAAKPRV-------GGADGPLV-----SLENIVISLQLLESLEASVLAQPVVGSLDRVLATGTLGENVKSLMDACLTAHPSLRVALSGQNPPTPLAPLTSSEDVEDMATAYFQKIYTSEQSIGDVVEMLKRFKTSGNSKENEIFACMVHNLFNEYRFFNKYPEK 733          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: F0WZB6_9STRA (Uncharacterized protein AlNc14C420G11519 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZB6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.870e-42
Identity = 143/404 (35.40%), Postives = 193/404 (47.77%), Query Frame = 1
Query:   34 WRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDPVVTP-NEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYF--RPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLC-LEALAAALRALQG-------PAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPA-------EDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPE 1191
            W+H+R QL  LKAA+ +PP V SFA S  +    EG D    P N AW SLD V +LL +S+  + YG VR +F  P   CP+VL+  LA     +   LR D+ S LL +Y   RPN    A  ++R LW V P+LV  +  + F    S Q    +  + R   DA    L  +   F  ALA AI G+                       +  ++E W+TERL    R  F    LAF+  +   A P           K+    PT+ L  +EAL   L+ + G       P A+ L++                        A+T   +       E IEE ANAYFQ+IYTSEQ+I +V+ ML+RF+ S   RE++IF CM+HNLFDEYRFF +YPE
Sbjct:  398 WKHQRAQLGVLKAAIELPPEVLSFAESSRKLAPFEGADAAAVPKNGAWFSLDFVEALLNISEK-DCYGEVRHIFDGPMKTCPDVLIANLAESNLKSN-NLRDDVFSELLGIYIMGRPN----APLIMRHLWSVVPKLVLHASVKCFYATTSAQIIPRIFTLYRSTEDAFPNAL--QSNYFTFALALAIIGSNH---------------------DVFNIETWMTERLASQ-RVPFVTSCLAFVHRNYTRAVP-----------KKSITPPTSHLMSIEALTVILKLIVGVQSILPPPLAQELKRVITLSIEVHPVIAAGTKSRTETIKAVTEITSTEANITPEMIEEQANAYFQQIYTSEQNINDVVAMLKRFQTSRDERERQIFFCMIHNLFDEYRFFPRYPE 760          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A7S2UP57_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP57_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.740e-42
Identity = 146/462 (31.60%), Postives = 212/462 (45.89%), Query Frame = 1
Query:   34 WRHRRGQLSRLKAAVAVPPHVHSFA-----GSPNRQPLLEGVDPVVTPN-EAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLAL---------AAVPAG-------AGPKLRADLLSRLLPLYFRPN-----RNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPS------LQSTVYLLRVSRLLPDARSTLLAW----EDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQK--------DDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMT------------------------------GGPAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            W+++  QLS L+  +AVPP V++F       +     + +G      PN + W S+ ++  LL LS    L   VR++F+     CPEVLL AL         AA   G        G +++ +L+  L+PL+F+PN     +NG AA  +RRLW ++P  VA +C EA++   +      L + V+++ + RLLP   S   A     +D  F +A+A  +A                         + L L AW++ER+          + R  FA  +++++    A A  R        G   G+  P   + +E ++  L+ L G     L QA                       A+T                               G  +DIEEMAN+YFQ+IYTSEQSIGEVIEML+RFK S + RE +IFACM+HNLFDEYRFF KYPEK
Sbjct:  484 WQNQVAQLSFLEYILAVPPRVYTFPVNEAESADAATAVSDGKSTSTCPNPQGWASVSVLLRLLSLSDVSSLARRVRDLFVRGLLSCPEVLLCALVRLQLSVASAAAQGGRPDAAQNVGVRMKGELMRELIPLFFKPNPHHRVQNGPAA--LRRLWAISPNTVAAACIEAWRSTNTDTPQTRLATVVHIISIVRLLPSPESVTAAIINGNKDFEFGLAVAFVMAD-----------------------NDMLQLSAWLSERMSTMNSSGSTGNGRVIFAIAIVSYIGKMYASALSR--------GNHSGKGTPL--VSIENISVCLQFLNGLDKNVLSQALPSSLSGGGDSSNRGMLLGESVKALTDACMSAHTSLSSLMSNSSSAPSSSRTPTPTSGSTDDIEEMANSYFQKIYTSEQSIGEVIEMLKRFKVSGNARENDIFACMIHNLFDEYRFFSKYPEK 910          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A7S0X021_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X021_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 1.150e-41
Identity = 131/392 (33.42%), Postives = 188/392 (47.96%), Query Frame = 1
Query:   34 WRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGV----DPVVTPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSCAEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALA-AAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            W    GQLS L+ AV+  P + SF GS  +   +EG+     PV TPN+AWLS+DL+  L  L  +P     VRE+   P   CPEVLLL +AAVP      L+ ++ S LLPLY   N   +   ++ RLW VN  L+ ++  E +      Q    L+RV  +  + ++     +   +A +L  AA+AG                        + L+LE W  E +Q+D  + F   LLAFL    A  +P        PG           L  +++   LRAL  P    +                          A T   A D+EE AN++FQ+IY+  + + +V+ ML+ FK S++ REQE+FACM+HNLFDEYRFF +YP+K
Sbjct:  155 WGCHGGQLSFLRHAVSAGPELFSFQGSERKLAPVEGLHGGKSPVGTPNQAWLSIDLLQVLCYLVVEPSHQPVVREILETPVKHCPEVLLLTMAAVPPMEWSLLQREVFSVLLPLYL-ANNQANTQVVLHRLWAVNSNLLLEALVEYYA-----QDAANLMRVLDICQELKALPKVLDSTPYAFSLELAALAGWR----------------------QYLNLEKWAAEHMQRDSMQ-FVTALLAFLDLRTAPDQP--------PGKPR--------LHEDSMRGYLRAL-APMRGQMAGDLGAAAKKVSEQVAKMYPGLAPLVAGTESFASDVEEEANSHFQKIYSEARPLEDVVGMLRGFKVSANPREQEVFACMIHNLFDEYRFFPRYPDK 500          
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Match: A0A7S2YLA2_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLA2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.170e-41
Identity = 146/439 (33.26%), Postives = 212/439 (48.29%), Query Frame = 1
Query:   34 WRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDPVVT-PN-EAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALAAVPA-----------GAGPKLRADLLSRLLPLYFRPNR--------NGHAAALIRRLWQVNPRLVAQSCAEAFKVDPS------LQSTVYLLRVSRLLP---DARSTLLAWEDAAFAVALAAAIAGAEPIAGTPAAXXXXXXXXXXATAAERLDLEAWVTERLQKDDREAFAQRLLAFLQAHAAGARPRE--ATQAAAPGGKEG-EVLPTAPLCLE-------------------ALAAALRALQGPAAEALQQAXXXXXXXXXXXXXXXXXXXXXXAAMTGGPAEDIEEMANAYFQRIYTSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK 1194
            WR+  GQLS ++  ++VPP V             +   P  T PN + W    ++  LL LS  P LY  VR++F+     CPEVLL +L  +              AG +L+ D++  L+PL+FRP +        NG AA  +RRL+ ++P  V  +C EA++   +      L S ++++ ++RLLP   +A  +LL+ +D  F++A+A  +A                         + L L+ W+TE+ +  +    A  L+ +++     A PR   + Q A PG     E + T+ L L                     L  A+ AL     +A                   XXXXXXX     G +ED+EEMA  YFQ IYTS+QSI E++EML+RFK S + +E EIFACMVHNLFDEYRFF KYPEK
Sbjct:   82 WRNTAGQLSVVECILSVPPAVFLLPLEEEELADAQAAPPATTLPNPQGWACTAVLNRLLYLSDIPSLYRRVRDLFVKCLLACPEVLLCSLVRMQLRVAQTGDSNHLNAGLQLKQDVMRELIPLFFRPQQAHAPTRVQNGPAA--VRRLYAISPPTVVAACLEAWRSTANEGPAVRLGSILHIINIARLLPNPTEAVGSLLSGKDVEFSLAMAFVMAD-----------------------HDYLQLKVWLTEKFKGANVMPMAIALMNWIRLQYQSAAPRADPSKQGAGPGPLVSLENVATSLLLLRELDPSVLSQPAGGTGDTTRTLGQAINALTEAVLQAFPNLRPHFAAPATAASSGAXXXXXXXXXXXAGASEDVEEMATQYFQNIYTSKQSISEIVEMLKRFKTSGNSKENEIFACMVHNLFDEYRFFAKYPEK 495          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19027.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN3_ECTSI6.170e-11556.30CNOT1_TTP_bind domain-containing protein (Fragment... [more]
A0A6H5JXN6_9PHAE1.540e-11054.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHM2_9STRA2.440e-9248.57CCR4-Not complex component, Not1-domain-containing... [more]
W7TUR4_9STRA9.910e-5938.16Ccr4-not transcription n=2 Tax=Monodopsidaceae Tax... [more]
A0A024GTE8_9STRA4.890e-4434.98Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A1Z5JVQ8_FISSO7.510e-4332.51CCR4-NOT transcription complex subunit 1 n=2 Tax=F... [more]
F0WZB6_9STRA1.870e-4235.40Uncharacterized protein AlNc14C420G11519 n=1 Tax=A... [more]
A0A7S2UP57_9STRA4.740e-4231.60Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0X021_9CHLO1.150e-4133.42Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S2YLA2_9STRA5.170e-4133.26Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19027contigP-wetherbeei_contig19027:118..1311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMN3
PFAMsCNOT1_CAF1_bind,CNOT1_HEAT,CNOT1_TTP_bind,DUF3819,Not1
Model size1194
Max annot lvl2759|Eukaryota
KEGG koko:K12604
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032774,GO:0032947,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1990904,GO:2000112,GO:2000113
Exons1
Evalue1.01e-115
EggNOG OGsCOG5103@1|root,KOG1831@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_003880.1
Descriptionnuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Cds size1194
COG categoryDK
BRITEko00000,ko00001,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186161.9557762-CDS-P-wetherbeei_contig19027:117..13111683186161.9557762-CDS-P-wetherbeei_contig19027:117..1311Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19027 118..1311 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19027.1.1prot_P-wetherbeei_contig19027.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19027 118..1311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19027.1.1

>prot_P-wetherbeei_contig19027.1.1 ID=prot_P-wetherbeei_contig19027.1.1|Name=mRNA_P-wetherbeei_contig19027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=398bp
RALPQELFFSPWRHRRGQLSRLKAAVAVPPHVHSFAGSPNRQPLLEGVDP
VVTPNEAWLSLDLVTSLLVLSQDPELYGTVREVFLVPAYRCPEVLLLALA
AVPAGAGPKLRADLLSRLLPLYFRPNRNGHAAALIRRLWQVNPRLVAQSC
AEAFKVDPSLQSTVYLLRVSRLLPDARSTLLAWEDAAFAVALAAAIAGAE
PIAGTPAAAASGGAGGGGATAAERLDLEAWVTERLQKDDREAFAQRLLAF
LQAHAAGARPREATQAAAPGGKEGEVLPTAPLCLEALAAALRALQGPAAE
ALQQAAPSLRAAVSHVADAAKRAHPQLAAMTGGPAEDIEEMANAYFQRIY
TSEQSIGEVIEMLQRFKASSSVREQEIFACMVHNLFDEYRFFHKYPEK
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mRNA from alignment at P-wetherbeei_contig19027:118..1311-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19027.1.1 ID=mRNA_P-wetherbeei_contig19027.1.1|Name=mRNA_P-wetherbeei_contig19027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1194bp|location=Sequence derived from alignment at P-wetherbeei_contig19027:118..1311- (Phaeothamnion wetherbeei SAG_119_79)
CGCGCGCTCCCGCAGGAGCTCTTCTTCTCGCCGTGGCGGCACCGGCGTGG CCAGCTGAGCCGCCTGAAGGCGGCCGTGGCCGTCCCGCCGCACGTCCACT CGTTCGCCGGCAGCCCGAACCGGCAGCCGCTGCTGGAAGGGGTCGATCCG GTGGTGACGCCGAACGAGGCGTGGCTGAGCCTCGATTTGGTGACGTCGCT GCTGGTGCTTTCGCAGGACCCAGAGCTGTACGGAACCGTCCGGGAGGTGT TCCTGGTGCCGGCATACCGGTGTCCGGAGGTGCTGCTGCTGGCGCTGGCG GCCGTGCCAGCCGGCGCGGGCCCCAAGCTGCGGGCTGACCTGCTGTCGCG GTTGCTGCCGCTCTACTTCCGGCCGAATCGCAATGGCCATGCGGCGGCGC TGATCCGCCGTCTGTGGCAGGTGAACCCTCGCTTGGTCGCGCAGTCATGC GCCGAGGCCTTCAAGGTGGATCCGTCCCTGCAGAGCACCGTCTACCTGCT GCGCGTCTCGCGCCTGCTGCCGGACGCCCGCTCCACGCTGCTGGCGTGGG AGGATGCCGCCTTTGCAGTGGCACTGGCGGCTGCCATTGCTGGCGCCGAG CCGATCGCCGGCACGCCCGCTGCGGCGGCGAGCGGCGGCGCCGGCGGCGG CGGGGCAACGGCGGCGGAGCGGCTGGATCTGGAGGCGTGGGTGACGGAGC GGCTCCAGAAGGACGACCGCGAGGCGTTCGCGCAGCGGCTGTTGGCATTC CTGCAGGCGCACGCAGCCGGCGCGCGGCCGCGGGAGGCCACGCAGGCGGC GGCGCCCGGTGGCAAGGAAGGAGAGGTGCTGCCGACGGCGCCGCTCTGCC TCGAGGCGCTAGCGGCAGCGCTGCGCGCACTGCAAGGACCCGCCGCCGAA GCGCTGCAGCAGGCGGCGCCATCGCTGCGGGCCGCAGTGTCGCACGTCGC GGACGCGGCAAAGCGGGCGCACCCGCAGCTGGCTGCGATGACAGGCGGGC CGGCAGAGGACATTGAGGAGATGGCCAACGCGTACTTCCAGCGCATCTAC ACGTCAGAGCAGAGCATCGGGGAGGTGATCGAGATGCTGCAGCGCTTCAA GGCGAGCAGCAGCGTGCGGGAGCAGGAGATCTTCGCGTGCATGGTGCACA ATCTGTTCGACGAGTACCGCTTCTTCCACAAGTACCCCGAGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19027:118..1311-

>mRNA_P-wetherbeei_contig19027.1.1 ID=mRNA_P-wetherbeei_contig19027.1.1|Name=mRNA_P-wetherbeei_contig19027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1194bp|location=Sequence derived from alignment at P-wetherbeei_contig19027:118..1311- (Phaeothamnion wetherbeei SAG_119_79)
CGCGCGCTCCCGCAGGAGCTCTTCTTCTCGCCGTGGCGGCACCGGCGTGG
CCAGCTGAGCCGCCTGAAGGCGGCCGTGGCCGTCCCGCCGCACGTCCACT
CGTTCGCCGGCAGCCCGAACCGGCAGCCGCTGCTGGAAGGGGTCGATCCG
GTGGTGACGCCGAACGAGGCGTGGCTGAGCCTCGATTTGGTGACGTCGCT
GCTGGTGCTTTCGCAGGACCCAGAGCTGTACGGAACCGTCCGGGAGGTGT
TCCTGGTGCCGGCATACCGGTGTCCGGAGGTGCTGCTGCTGGCGCTGGCG
GCCGTGCCAGCCGGCGCGGGCCCCAAGCTGCGGGCTGACCTGCTGTCGCG
GTTGCTGCCGCTCTACTTCCGGCCGAATCGCAATGGCCATGCGGCGGCGC
TGATCCGCCGTCTGTGGCAGGTGAACCCTCGCTTGGTCGCGCAGTCATGC
GCCGAGGCCTTCAAGGTGGATCCGTCCCTGCAGAGCACCGTCTACCTGCT
GCGCGTCTCGCGCCTGCTGCCGGACGCCCGCTCCACGCTGCTGGCGTGGG
AGGATGCCGCCTTTGCAGTGGCACTGGCGGCTGCCATTGCTGGCGCCGAG
CCGATCGCCGGCACGCCCGCTGCGGCGGCGAGCGGCGGCGCCGGCGGCGG
CGGGGCAACGGCGGCGGAGCGGCTGGATCTGGAGGCGTGGGTGACGGAGC
GGCTCCAGAAGGACGACCGCGAGGCGTTCGCGCAGCGGCTGTTGGCATTC
CTGCAGGCGCACGCAGCCGGCGCGCGGCCGCGGGAGGCCACGCAGGCGGC
GGCGCCCGGTGGCAAGGAAGGAGAGGTGCTGCCGACGGCGCCGCTCTGCC
TCGAGGCGCTAGCGGCAGCGCTGCGCGCACTGCAAGGACCCGCCGCCGAA
GCGCTGCAGCAGGCGGCGCCATCGCTGCGGGCCGCAGTGTCGCACGTCGC
GGACGCGGCAAAGCGGGCGCACCCGCAGCTGGCTGCGATGACAGGCGGGC
CGGCAGAGGACATTGAGGAGATGGCCAACGCGTACTTCCAGCGCATCTAC
ACGTCAGAGCAGAGCATCGGGGAGGTGATCGAGATGCTGCAGCGCTTCAA
GGCGAGCAGCAGCGTGCGGGAGCAGGAGATCTTCGCGTGCATGGTGCACA
ATCTGTTCGACGAGTACCGCTTCTTCCACAAGTACCCCGAGAAG
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