mRNA_P-wetherbeei_contig190.16.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A165UZ38_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165UZ38_9AGAM) HSP 1 Score: 138 bits (347), Expect = 4.000e-37 Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
E SL E+GTFE+ E P R+A+G RWV K KRN DGS+ R+K RLVA+GF+Q+ G DY E AP +R LA+ D E+E +DI TAYLN + E++YMR PKGFE GP+ VWRL++ LYGL+Q+
Sbjct: 64 EIQSLVENGTFELVECPPGRKAIGSRWVFKVKRNADGSIERYKGRLVAKGFSQRPGFDY--NETFAPTPKWASLRAILALAALEDLELESVDISTAYLNGTLEEDVYMRQPKGFEQKGPE---WVWRLQKLLYGLKQA 196
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY) HSP 1 Score: 132 bits (332), Expect = 5.930e-36 Identity = 65/130 (50.00%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 25 GTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
GT+E+ +LP +R A+GC+WV +KK N +G VV++KARLVAQG++Q G+D++ E APV ++ +R LA+ + +WEI QMD+ AYLN + EEIYMR P+GF DG V RL ++LYGL+QS
Sbjct: 2 GTWELQDLPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFL--ETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFN----DGSGHVCRLHKTLYGLKQS 125
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A177TY59_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TY59_9BASI) HSP 1 Score: 140 bits (353), Expect = 6.240e-36 Identity = 73/135 (54.07%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 10 SLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
SL GT+E+ ELP R+A+G RWV K K + +G R+KARLVAQGF QQ GVDY E APVA D R A+ ++ W I Q+D+ TAYLN + EEIYMR P GFE DGK +V RLR LYGL+QS
Sbjct: 1500 SLMGMGTWELMELPPNRKAIGSRWVYKLKLDEEGQAARWKARLVAQGFTQQPGVDYF--ETFAPVARFDSARIIFALAVHHGWVIHQLDVVTAYLNGDLDEEIYMRQPPGFEQKDKDGKELVCRLRLPLYGLKQS 1632
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 138 bits (348), Expect = 2.900e-35 Identity = 68/138 (49.28%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
EY LQ GT+E+ +LP +R A+GC+WV ++K N +G VV++KARLVAQG++Q G+D++ E APV ++ +R LA+ + +WEI QMD+ AYLN + EEIYMR P+GF+ DG + RLR++LYGL+QS
Sbjct: 929 EYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFL--ETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFD----DGSGRICRLRKTLYGLKQS 1060
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO) HSP 1 Score: 131 bits (329), Expect = 7.870e-35 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
E SL+ +GT+E+ +LP R+A+ +WV K KR DGS+ R+KARLV GF+Q EG+DY E APV + VR LA+ F +++ MD++TA+LN + E+IYMR PKGF V G + K V L++SLYGL+Q+
Sbjct: 89 EMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYT--ETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESK--VCHLKKSLYGLKQA 222
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A151R2I2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R2I2_CAJCA) HSP 1 Score: 127 bits (318), Expect = 7.980e-35 Identity = 61/138 (44.20%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
EY +L + T+ + +LP R +GC+WV K N DGS+ R+KARLVA+GF+QQ+G+D+ E +PV + +R L + I W+I+Q+D++ A+LN ++E+IYM P GFEVS K +V +L R+LYGL+Q+
Sbjct: 4 EYTALMNNNTWSLVDLPPHRHTVGCKWVFSIKENVDGSINRYKARLVAKGFHQQQGLDFT--ETFSPVIKLVTIRIILTLAITNHWDIQQIDVNNAFLNGHLTEDIYMEQPPGFEVSN---KKLVCKLNRALYGLKQA 136
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A5CAP5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5CAP5_VITVI) HSP 1 Score: 127 bits (318), Expect = 8.710e-35 Identity = 61/138 (44.20%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
E S++++G +++ ELP + +GC+W+ K K+++ G++VR+K RLVA+GF Q+EG+D +E +PV+S D R +A+ ++D E+ QMD+ TA+LN + E IYM PK FE + D K +V RL+RS+YGL+QS
Sbjct: 4 EMKSMKDNGVWDLVELPKGVKLIGCKWIFKTKQDSKGNIVRYKTRLVAKGFTQKEGIDC--KETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPKNFESN--DSKQLVCRLKRSIYGLKQS 137
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A6D2JTF8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JTF8_9BRAS) HSP 1 Score: 137 bits (344), Expect = 1.000e-34 Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKP--MVWRLRRSLYGLRQS 414
E ++L++ T+EIC LP ++ A+GCRWV K K N DGS+ R+KARLVA+GF QQEGVD+V + +PVA M V+T LAV DW + Q+DI A+LN + EEIYM P G+ + P V RL++SLYGL+Q+
Sbjct: 981 ELMALEKSDTWEICSLPDDKHAIGCRWVYKTKLNADGSLERYKARLVAKGFTQQEGVDFV--DTFSPVAKMTTVKTLLAVAAAKDWSLTQLDISNAFLNGDLDEEIYMTLPPGYTAKPGESLPPNAVCRLKKSLYGLKQA 1118
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A5C8R2_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5C8R2_VITVI) HSP 1 Score: 135 bits (340), Expect = 1.550e-34 Identity = 68/135 (50.37%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 10 SLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
+L+++GT+EI ELPAE+R +GC+W+ K N DGSV RFKARLVA+GF Q +DY EE APVA ++ VR L++ DW + Q+D+ A+LN ++EE+YM P GFE K + +LRRSLYGL+QS
Sbjct: 101 ALEKNGTWEISELPAEKRPVGCKWIFTVKYNEDGSVNRFKARLVAKGFTQSYRIDY--EETFAPVAKLNTVRVLLSLAANLDWPLHQLDVKNAFLNGDLAEEVYMEIPPGFETQTTRNK--ICKLRRSLYGLKQS 231
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 136 bits (342), Expect = 1.800e-34 Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGFNQQEGVDYVQEELSAPVASMDEVRTALAVGIYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQS 414
EY SL+E+ T+++CELPA R A+GCRWV KK +++G + R+KARLVAQGF+Q+ G+D E+ APV + VR +A+G+ DW + QMD+ TAYLN + IYM+ P+GF G + +V L++SLYGL+QS
Sbjct: 395 EYKSLEENKTWKLCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDV--EQTYAPVTRIQSVRILIALGVQLDWHMHQMDMVTAYLNGTLDTMIYMKQPEGFIKEGSEN--LVCDLQKSLYGLKQS 528 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig190.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig190.16.1 >prot_P-wetherbeei_contig190.16.1 ID=prot_P-wetherbeei_contig190.16.1|Name=mRNA_P-wetherbeei_contig190.16.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp EYLSLQEHGTFEICELPAERRALGCRWVLKKKRNTDGSVVRFKARLVAQGback to top mRNA from alignment at P-wetherbeei_contig190:10549..10962- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig190.16.1 ID=mRNA_P-wetherbeei_contig190.16.1|Name=mRNA_P-wetherbeei_contig190.16.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig190:10549..10962- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig190:10549..10962- >mRNA_P-wetherbeei_contig190.16.1 ID=mRNA_P-wetherbeei_contig190.16.1|Name=mRNA_P-wetherbeei_contig190.16.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig190:10549..10962- (Phaeothamnion wetherbeei SAG_119_79)back to top |