mRNA_P-wetherbeei_contig19.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19.3.1
Unique NamemRNA_P-wetherbeei_contig19.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.970e-46
Identity = 113/285 (39.65%), Postives = 150/285 (52.63%), Query Frame = 1
Query:  142 EVEISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLE---------QQKAEAAASDXXXXXXXXXXXXXXXX-GPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPRSDG 966
            E++IS  DYF ++ EF+VWL   K+  FEDL+S+E+HE+F+KFV  WN G L+P FY   +P  L+    KT H+WGFV+R++ RD   LE          +K + A S+                   +A G  G                          RE+ A +LDE APKETGR+A +D+RR    R H A ++RED  DGL   K  D MGG        FR  LAR Q  +QRR+  + E ++     E EKRAAF+AQMG+  GQ KITI+PR DG
Sbjct:  104 EIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATAPGLVVKKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLD-MKESDTMGGSDS-----FRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRDG 381          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 2.070e-46
Identity = 112/282 (39.72%), Postives = 147/282 (52.13%), Query Frame = 1
Query:  151 ISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLE---------QQKAEAAASDXXXXXXXXXXXXXXXX-GPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPRSDG 966
            IS  DYF ++ EF+VWL   KK+ FEDL+S+E+HE+F+KF+  WN G L+P FY   +P  L+    KT HKWGFV+R++ RD   LE          +K + A S+                 G +A G  G                           E+ A +LDE APKETGR+A +D+RR    R H A ++RED  DGL   K  D MGG        FR  LAR Q  + RR+  + E ++     E EKRAAF+AQMG+  GQ KITI+PR DG
Sbjct:   14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATAPGVVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLD-MKESDTMGGSDS-----FRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRDG 288          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC)

HSP 1 Score: 137 bits (344), Expect = 1.530e-34
Identity = 98/285 (34.39%), Postives = 143/285 (50.18%), Query Frame = 1
Query:  151 ISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTA----------------DRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPR 957
            IS  DYF K+REFRVWL   KKR FEDL+S++  + F+KF  +WN G L+ M+Y+S IPQ +++   +T HKWGF+  +   +   L   K     +                        SG SS+ A  + A     +++                  +RKR  +    +++E APK TGR+A V+++R  A  LHGA R +ED +DGL       +MGG        F  R+ R + A+ +R+  + +RV  A+  EA +   FL  MGI PGQ +ITI PR
Sbjct:   37 ISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYYAS-IPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK---------------------SGASSSTARPSKATSPPRSSKQQXXXXXXXXXXXXXDKYERKRYHKHKELVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDF-LMGGSDD-----FHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPR 293          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 8.090e-34
Identity = 99/275 (36.00%), Postives = 139/275 (50.55%), Query Frame = 1
Query:  133 SKPEVEISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPR 957
            S+P+V+IS  DYF K+ EFRVWL   K+  F+DL+S +    F KFV KWN G L+ M+Y+  IPQ +++   +T HKWG     T R      +   + + +                    A   S     D+      E   A R  D+K   +    +L+E APK TGREA ++++R  A  +HGA R  ED +DGL+      +MGG        F+ R+ R + A+ RR   Q +RV  A+  EA +   FLA MGI PGQ +ITI PR
Sbjct:   42 SRPDVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYTK-IPQHILEGIQRTKHKWGLKMNETERLELASTKDTVDISTNKGTNHPPPYKSHPQTSKATSASFASKKRDDDSDXXXXXERKRAKR--DKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAF-LMGGSDD-----FQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPR 307          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.540e-32
Identity = 87/225 (38.67%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  127 EYSKPEVEISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQ-----------KAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGG 768
            E + P V+++  DYF +  EF VWLL ++++ FE+LSS++ H+ F KF  +WN G LEP +YS AIP+  V  A KT H WGFV R+T RD + L+             KA A  S                  P  GG       D G +     G   +           AA LDE APKETGR+AA+D+RRT    +HGA R+RE  +DGL   +  D MGG
Sbjct:   52 EATVPSVKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTAITKASAGGSTACAASHATNMVRPSVA-PRGGG-----EGDTGGSRGHGRGGGLKAVH--------AAALDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPE-QDTMGG 261          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A1V9Z5L8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5L8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.780e-31
Identity = 94/272 (34.56%), Postives = 137/272 (50.37%), Query Frame = 1
Query:  142 EVEISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPR 957
            E  IS  DYF K+REFRVWL  +K   FEDL+SE+  + F+KFV +WN G L+ M+Y+  IPQ +++   +T HKWGFV  +   +   L   K     +                    +   S   + D                 +K  + +D+ +++E APK TGREA ++++R  A  LHGA R +ED +DGL   +   +MGG        F  R+ R + A  RR+  + +RV  A+  E+ +   FL  MGI PGQ +ITI PR
Sbjct:   35 EERISRDDYFEKAREFRVWLKTDKNVYFEDLTSEDAMKHFDKFVRRWNDGKLDRMYYTG-IPQHVLESVQRTKHKWGFVKNLNDSERLHLASTKDTVDITTNKSTSSKESYRNEPAQSKPSSSRSRQINDDXXXXXXXXXXXXXXXX-KKYHKHKDS-VMEELAPKATGREATIEKKREKAATLHGAARQKEDSKDGLDLSEDF-LMGGTDD-----FHARVQRRKAAIDRRQDEKQQRVAAAQDAESARMQKFLQDMGIQPGQERITIAPR 297          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.290e-30
Identity = 93/290 (32.07%), Postives = 145/290 (50.00%), Query Frame = 1
Query:  151 ISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFE-KFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRI---------TGRDAAFLEQQKAE-------AAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVP----GQGKITIKPR 957
            IS  DYF ++ EFRVWL ++K +  +DLS+EE  ++F   FV KWN G L  MFY   +P +++++  +T H+WGFV+++         T +D+  +  +K +       A+  D                G E               +  E     R  +RK+ +E    ++DE APKETGREA + +RR   ++LHGA RDRED +DGL   +   +MGG        F+RR+A+   AR+R++  Q  ++      E+ +   FL  MG+      G+  +TI PR
Sbjct:   67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKDLLNSGNGASVKDPPREKTETDRSNSRRKGREE--------------EDKEETWKRRKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDF-LMGGGRHGGEDDFQRRMAQRDSARRRKQGEQQAKLAGLAAKESARMDKFLEDMGLAGANTNGRKPMTIAPR 340          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.550e-29
Identity = 102/299 (34.11%), Postives = 145/299 (48.49%), Query Frame = 1
Query:  148 EISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFE-KFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAART---------------------------ADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGK-ITIKPR 957
            EIS  D+F ++ EFRVWL + K +  EDL+++E   +F+ KFV KWN G L  MFY   IP+ ++++  +T H WGF +R++ ++A  L      A+A D                 P A     +  +     DA                                    ADRKR R+   ++L+E APKETGREAA+++RR  A +LHGA RDRE+ +DGL       +MGG         + RL   + AR RR+  Q +++ E +  EA +   FL  MGI    GK ITI PR
Sbjct:   28 EISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQL------ASARDSVGVATRKTDLLATPRAPAAPEPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRESVLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAF-LMGGSGSD----LQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPR 314          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: W4GDA5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDA5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.590e-29
Identity = 93/273 (34.07%), Postives = 137/273 (50.18%), Query Frame = 1
Query:  139 PEVEISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERVREAERLEAEKRAAFLAQMGIVPGQGKITIKPR 957
            PE  ++  DYF K++EFRVWL   K   F+DL+S +    FEKFV KWN   LE M+Y+  IPQ +++   +T HKWGF  ++   +   L   K     S                           +S+     D+ +    A+  DRK   +    + +E APK TGR+AA++++R     +HGA R ++D +DGL+  +   +MGG        F+ R+ R + A+ RR     +RV  A+  EA +   FLA MGI PGQ +ITI PR
Sbjct:   37 PETTLTVDDYFQKAKEFRVWLKLEKGVYFDDLTSADAQAAFEKFVSKWNANRLESMYYTK-IPQQVLESVHRTKHKWGF--KMNDHERLELASTKDTVDISTNKETTSARPALPSHSTATSRATPKQPASSPREVDDSDDDRKRAKR-DRKAYNKHKDMVHEELAPKATGRDAAIEKKRQVGAAVHGAARQKDDAKDGLTLSEDF-LMGGSDD-----FQARVQRRKQAQGRRAEEMNQRVTAAKDAEAARMQKFLADMGIQPGQERITIAPR 299          
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Match: H3H526_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H526_PHYRM)

HSP 1 Score: 122 bits (307), Expect = 5.080e-29
Identity = 82/241 (34.02%), Postives = 127/241 (52.70%), Query Frame = 1
Query:  151 ISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMF-EKFVGKWNMGSLEPMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDXXXXXXXXXXXXXXXXGPEAGGCSGVSSTDAGAADAAEVGAAA---RTADRKRRRERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKGLDVMGGXXXXXXXXFRRRLARDQGARQRREAGQAERV 861
            IS  DYF +  EFRVWL + K +  +DLS++E  E+F ++F  KWN G L  MFY   +P ++V++  +T H+WGFV+++  ++   L   K     +                 GP+       S +   A +  E        R  D+KR RE    ++DE APK TGREA +++RR  + +LHGA RDR+D +DGL   +   +MGG        F+RR+A+    R+R++  Q E++
Sbjct:   56 ISEEDYFLRQTEFRVWLAQTKGKYVDDLSTDEATELFTDQFAKKWNRGKLSTMFYEG-LPDAVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVDVATKRENLLSSGSKRESVKGPQLEEDRDSSKSKRRAKELEEDKEEQWRRRKLDQKREREYRDTVMDELAPKATGREAQIEKRRQLSQKLHGAARDRDDARDGLDVSEDF-LMGGGRGDGDEEFKRRMAQRDSTRRRKQEMQEEKL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q7_9PHAE1.970e-4639.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTC9_ECTSI2.070e-4639.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067BZG8_SAPPC1.530e-3434.39Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KJU9_9STRA8.090e-3436.00Aste57867_8246 protein n=1 Tax=Aphanomyces stellat... [more]
A0A836CIB7_9STRA4.540e-3238.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9Z5L8_9STRA3.780e-3134.56Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A3F2RY91_9STRA1.290e-3032.07Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6Y8C8_9STRA1.550e-2934.11Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4GDA5_9STRA1.590e-2934.07Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
H3H526_PHYRM5.080e-2934.02Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19contigP-wetherbeei_contig19:5217..6477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTC9
Model size969
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007275,GO:0008150,GO:0009791,GO:0009908,GO:0009966,GO:0010646,GO:0010928,GO:0022414,GO:0023051,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048479,GO:0048480,GO:0048519,GO:0048523,GO:0048583,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0051302,GO:0051782,GO:0061458,GO:0065007,GO:0090567,GO:0099402
Exons4
Evalue3.39e-47
EggNOG OGs2BY93@1|root,2S2GY@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006090.1
Cds size969
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186160.8378904-CDS-P-wetherbeei_contig19:5216..53611683186160.8378904-CDS-P-wetherbeei_contig19:5216..5361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19 5217..5361 +
1683186160.8505511-CDS-P-wetherbeei_contig19:5452..55531683186160.8505511-CDS-P-wetherbeei_contig19:5452..5553Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19 5453..5553 +
1683186160.8673022-CDS-P-wetherbeei_contig19:5655..59181683186160.8673022-CDS-P-wetherbeei_contig19:5655..5918Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19 5656..5918 +
1683186160.8778174-CDS-P-wetherbeei_contig19:6017..64771683186160.8778174-CDS-P-wetherbeei_contig19:6017..6477Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19 6018..6477 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19.3.1prot_P-wetherbeei_contig19.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19 5217..6477 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19.3.1

>prot_P-wetherbeei_contig19.3.1 ID=prot_P-wetherbeei_contig19.3.1|Name=mRNA_P-wetherbeei_contig19.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MAHKERKKHTTKRDRREKKERKKKDKRKEKKHRAKDRDESEEEYSKPEVE
ISSGDYFTKSREFRVWLLRNKKRAFEDLSSEETHEMFEKFVGKWNMGSLE
PMFYSSAIPQSLVDEACKTHHKWGFVSRITGRDAAFLEQQKAEAAASDAA
AAAVAANGRAASAAGPEAGGCSGVSSTDAGAADAAEVGAAARTADRKRRR
ERDAALLDEYAPKETGREAAVDRRRTAADRLHGAGRDREDLQDGLSGQKG
LDVMGGGGGKDEEEFRRRLARDQGARQRREAGQAERVREAERLEAEKRAA
FLAQMGIVPGQGKITIKPRSDG*
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mRNA from alignment at P-wetherbeei_contig19:5217..6477+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19.3.1 ID=mRNA_P-wetherbeei_contig19.3.1|Name=mRNA_P-wetherbeei_contig19.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1261bp|location=Sequence derived from alignment at P-wetherbeei_contig19:5217..6477+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTCACAAGGAGCGCAAAAAACACACCACCAAACGCGATCGCAGAGA AAAAAAAGAAAGGAAGAAGAAGGACAAGCGCAAAGAGAAAAAGCACAGAG CGAAGGACAGAGACGAGAGTGAAGAGGAGTATAGCAAACCGGAAGGTAAG AACGACCATTAATACACTTTATCGAGTCAAGGGACTGGGACTCCGCTCAT CACGCTTCTCATTGTCCTTTTTCTGGCACATGGCAGTCGAGATTTCAAGC GGAGACTACTTCACAAAGTCGCGCGAGTTCAGGGTGTGGTTGCTGCGCAA CAAGAAGCGGGCTTTCGAGGATTTGAGCTCTGAAGAGGTAAGACGGTTCT ACTATTTGTCTACTCTAGCGAGACCAGTTCTCCCTACGTTCATGTCTCTG ACCCGACGACCTCTTAAACCTCTCACTTCCCATCCGCAGACGCACGAGAT GTTTGAGAAGTTCGTGGGAAAGTGGAACATGGGGAGCCTGGAGCCCATGT TTTACAGCAGCGCCATCCCACAATCCCTGGTCGACGAGGCGTGCAAGACG CACCACAAATGGGGCTTTGTCAGCCGCATCACCGGCCGCGACGCCGCCTT CCTCGAGCAGCAAAAGGCCGAAGCCGCCGCCAGCGACGCGGCGGCCGCCG CTGTCGCCGCCAACGGCCGCGCCGCCTCGGCGGCGGGGCCAGAAGCGGGC GGGTCGCGGAAACGCAAGGCCGAAGTGGCGCCTCGACTACCTGCTCCCGG CGGCGGCGGCGGCGGCGGCCGCCTTGGTGGCGGCCTCGGCGGCGGCAACA GCTGCAGCGGCGTCTCCTCTACCGACGCCGGCGCCGCTGATGCCGCCGAA GTCGGCGCCGCCGCCCGCACCGCCGACCGAAAGCGCCGGCGCGAGCGCGA CGCCGCGCTACTCGACGAGTACGCGCCCAAGGAGACGGGCCGGGAGGCGG CGGTTGACAGGCGGCGGACGGCCGCCGATCGCCTGCACGGCGCCGGCCGA GATCGCGAGGACTTGCAGGACGGATTGTCGGGTCAAAAGGGCCTGGACGT GATGGGCGGCGGCGGCGGGAAGGACGAGGAGGAGTTCCGGCGGCGGCTGG CTCGGGACCAGGGCGCACGGCAGCGGCGGGAGGCCGGGCAGGCGGAGCGG GTGCGGGAGGCGGAGCGGCTCGAGGCAGAGAAGCGCGCGGCGTTCCTCGC TCAGATGGGGATCGTGCCCGGGCAGGGGAAGATCACCATCAAGCCGCGGA GTGACGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19:5217..6477+

>mRNA_P-wetherbeei_contig19.3.1 ID=mRNA_P-wetherbeei_contig19.3.1|Name=mRNA_P-wetherbeei_contig19.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig19:5217..6477+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTCACAAGGAGCGCAAAAAACACACCACCAAACGCGATCGCAGAGA
AAAAAAAGAAAGGAAGAAGAAGGACAAGCGCAAAGAGAAAAAGCACAGAG
CGAAGGACAGAGACGAGAGTGAAGAGGAGTATAGCAAACCGGAAGTCGAG
ATTTCAAGCGGAGACTACTTCACAAAGTCGCGCGAGTTCAGGGTGTGGTT
GCTGCGCAACAAGAAGCGGGCTTTCGAGGATTTGAGCTCTGAAGAGACGC
ACGAGATGTTTGAGAAGTTCGTGGGAAAGTGGAACATGGGGAGCCTGGAG
CCCATGTTTTACAGCAGCGCCATCCCACAATCCCTGGTCGACGAGGCGTG
CAAGACGCACCACAAATGGGGCTTTGTCAGCCGCATCACCGGCCGCGACG
CCGCCTTCCTCGAGCAGCAAAAGGCCGAAGCCGCCGCCAGCGACGCGGCG
GCCGCCGCTGTCGCCGCCAACGGCCGCGCCGCCTCGGCGGCGGGGCCAGA
AGCGGGCGGCTGCAGCGGCGTCTCCTCTACCGACGCCGGCGCCGCTGATG
CCGCCGAAGTCGGCGCCGCCGCCCGCACCGCCGACCGAAAGCGCCGGCGC
GAGCGCGACGCCGCGCTACTCGACGAGTACGCGCCCAAGGAGACGGGCCG
GGAGGCGGCGGTTGACAGGCGGCGGACGGCCGCCGATCGCCTGCACGGCG
CCGGCCGAGATCGCGAGGACTTGCAGGACGGATTGTCGGGTCAAAAGGGC
CTGGACGTGATGGGCGGCGGCGGCGGGAAGGACGAGGAGGAGTTCCGGCG
GCGGCTGGCTCGGGACCAGGGCGCACGGCAGCGGCGGGAGGCCGGGCAGG
CGGAGCGGGTGCGGGAGGCGGAGCGGCTCGAGGCAGAGAAGCGCGCGGCG
TTCCTCGCTCAGATGGGGATCGTGCCCGGGCAGGGGAAGATCACCATCAA
GCCGCGGAGTGACGGCTGA
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