mRNA_P-wetherbeei_contig18983.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18983.1.1
Unique NamemRNA_P-wetherbeei_contig18983.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A7C4XYM0_9HYPH (Translation initiation factor IF-2 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XYM0_9HYPH)

HSP 1 Score: 719 bits (1857), Expect = 2.300e-252
Identity = 365/438 (83.33%), Postives = 410/438 (93.61%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV TD GHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAA VP+IVAINKIDK D+DP RV TELLQH +VVESMSG+ L+VPVSA+K TNLDKLLEAIVLQAE+LELKANPNRTANG+VIEAKL+RGRGPVGTLLVERGTLRVGDI+VAG AWGRVRALIDDKG NV EAGP+VPVE+LGFDSAPEAGDEFSVVESE+RAREITDYRVRKRR+ LGSAGTPRTLE MM QLK+AGRKEFPLVIKGDVQGSVEAI+G+L+KISTDEV+AR++H GVGGITESD+ALA ASKA+VIGFNVRAN QAK  AD  G+EIRYY+IIYDLVD+V+AAMSGLLAPT +E+FLG+A + QVFNI+KVGK+AG +V +G+VERGA++RL+RDNVVIL+EG+LS+LKRFKD+VREV +GQECG+A
Sbjct:  444 GAYQVTTDDGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAGVPLIVAINKIDKADADPNRVRTELLQHGVVVESMSGETLEVPVSALKRTNLDKLLEAIVLQAELLELKANPNRTANGHVIEAKLERGRGPVGTLLVERGTLRVGDIVVAGTAWGRVRALIDDKGKNVEEAGPSVPVEMLGFDSAPEAGDEFSVVESESRAREITDYRVRKRREALGSAGTPRTLEQMMQQLKDAGRKEFPLVIKGDVQGSVEAIVGALRKISTDEVEARIVHAGVGGITESDIALAAASKAVVIGFNVRANVQAKMSADRDGIEIRYYDIIYDLVDDVRAAMSGLLAPTVREIFLGNAEVLQVFNISKVGKVAGCRVREGRVERGAKVRLIRDNVVILKEGRLSSLKRFKDEVREVPAGQECGMA 881          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A1I7NTP5_9HYPH (Translation initiation factor IF-2 n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NTP5_9HYPH)

HSP 1 Score: 694 bits (1791), Expect = 3.970e-242
Identity = 354/438 (80.82%), Postives = 400/438 (91.32%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV+   G KITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKP +DP RV TELL HEIVVESM GD L++PVSA+K TNLDKLLEAI LQAEIL+L+ANP RTA G VIEAKL+RGRGPVGT+LV+RGTL VGDIIVAG AWGRVRAL++D G N+  AGP+VPVEVLGFDSAPEAGD+F+VVE+EARARE+TDYRVRKRR+TLGSAGT  +LE MM QLK+AGRKEFPLV+KGDVQGS+EAI+G+LKK+  DEV+ARL+H+GVGGITESD+ALA A+KA+VIGFNVRANAQAKQ AD+QG+EIRYYNIIYDLVDEVKAAMSGLLAPT++E+FLG+ATIKQVF ITK GK+AG  VT+GKVERGA++RLLRDNVVI  EG LS LKRFKDDV+EV +GQECG++
Sbjct:  463 GAYQVMAPNGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPQADPNRVRTELLSHEIVVESMGGDTLEIPVSALKRTNLDKLLEAIHLQAEILDLRANPARTAEGVVIEAKLERGRGPVGTVLVQRGTLHVGDIIVAGMAWGRVRALLNDHGANIATAGPSVPVEVLGFDSAPEAGDQFAVVENEARARELTDYRVRKRRETLGSAGTKSSLEQMMQQLKDAGRKEFPLVVKGDVQGSLEAIVGALKKVGNDEVEARLVHSGVGGITESDIALAAAAKAVVIGFNVRANAQAKQAADAQGVEIRYYNIIYDLVDEVKAAMSGLLAPTKREIFLGYATIKQVFTITKAGKVAGCVVTEGKVERGAKVRLLRDNVVI-HEGTLSILKRFKDDVKEVTAGQECGMS 899          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A433ABS4_HYPSQ (Translation initiation factor IF-2 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433ABS4_HYPSQ)

HSP 1 Score: 694 bits (1791), Expect = 6.600e-242
Identity = 356/438 (81.28%), Postives = 400/438 (91.32%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV    G KITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAK+A VPIIVAINKIDKP ++P RV TELL HEIVVESM GD L+VPVSA+K TNLDKLLEAI LQAEIL+LKANP RTA G VIEAKL+RGRGPVGT+LV+RGTL VGDIIVAG AWGRVRAL+DD+G  ++ AGP+VP EVLGFDSAPEAGD+F+VVE+EARARE+TDYRVRKRR+TLGSAGT  TLE MM QLK+AGRKEFPLV+KGDVQGSVEAI G+LKK+  DEV+ARL+H+GVGGITESD+ALA AS+A+VIGFNVRANAQAKQ AD+QG+EIRYYNIIYDLVDEVKAAMSGLLAPT++EVFLG+A+IKQVFNI+KVGK+AG  VT+GKVERGA++RLLRDNVVI  EG LS LKRFKDDV+EVV+GQECG++
Sbjct:  479 GAYQVTAKDGSKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKSANVPIIVAINKIDKPQAEPNRVRTELLSHEIVVESMGGDTLEVPVSALKHTNLDKLLEAIHLQAEILDLKANPVRTAEGVVIEAKLERGRGPVGTVLVQRGTLHVGDIIVAGMAWGRVRALLDDRGAQIQSAGPSVPAEVLGFDSAPEAGDQFAVVENEARARELTDYRVRKRRETLGSAGTKSTLEQMMQQLKDAGRKEFPLVVKGDVQGSVEAIAGALKKVGNDEVEARLVHSGVGGITESDIALAAASRAVVIGFNVRANAQAKQAADAQGVEIRYYNIIYDLVDEVKAAMSGLLAPTKREVFLGYASIKQVFNISKVGKVAGCVVTEGKVERGAKVRLLRDNVVI-HEGTLSILKRFKDDVKEVVAGQECGMS 915          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: F8JFL1_HYPSM (Translation initiation factor IF-2 n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=F8JFL1_HYPSM)

HSP 1 Score: 693 bits (1789), Expect = 1.600e-241
Identity = 356/438 (81.28%), Postives = 400/438 (91.32%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV    G KITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAA VPIIVAINKIDKP +DP RV TELL +EIVVESM G+ L+VPVSA+K TNLDKLLEAI LQAEIL+LKANPNRTA+G VIEAKL+RGRGPVGT+LV+RGTL VGDIIVAG AWGRVRAL++D G N++ AGP+VP EVLGFDSAPEAGD+F+VVE+EARARE+TDYRVRKRR+TLGSAGT  TLE MM QLK+AGRKEFPLV+KGDVQGSVEAI G+LKK+  +EV+ARL+H+GVGGITESD+ALA A+KA+VIGFNVRANAQAKQ AD+ G+EIRYYNIIYDLVDEVKAAMSGLLAPTR+EVFLG+ATIKQVFNI+K GK+AG  VT+GKVERGA++RLLRDNVVI  EG L+ LKRFKDDV+EVVSGQECG++
Sbjct:  485 GAYQVTAPDGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAANVPIIVAINKIDKPQADPNRVRTELLSYEIVVESMGGETLEVPVSALKHTNLDKLLEAIRLQAEILDLKANPNRTADGVVIEAKLERGRGPVGTVLVQRGTLHVGDIIVAGTAWGRVRALLNDHGANIQSAGPSVPAEVLGFDSAPEAGDQFAVVENEARARELTDYRVRKRRETLGSAGTKSTLEQMMQQLKDAGRKEFPLVVKGDVQGSVEAIAGALKKVGNEEVEARLVHSGVGGITESDIALAAAAKAVVIGFNVRANAQAKQAADAAGVEIRYYNIIYDLVDEVKAAMSGLLAPTRREVFLGYATIKQVFNISKAGKVAGCIVTEGKVERGAKVRLLRDNVVI-HEGTLAILKRFKDDVKEVVSGQECGMS 921          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A2S5MBA4_HYPSQ (Translation initiation factor IF-2 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MBA4_HYPSQ)

HSP 1 Score: 692 bits (1785), Expect = 1.930e-241
Identity = 358/439 (81.55%), Postives = 401/439 (91.34%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEA-GRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQVV   G KITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAA VP+IVAINKIDKP +DPKRV T+LLQHEIVVESM G+ L+VPVSA+K TNLDKLLEAI LQAEIL+LK NP R A G VIEAKL+RGRGPVGT+LV+RGTL+VGDI+VAG AWGRVRALIDD G NV  AGP+VPVE+LGFDSAP+AGD+F VVE+EARAREITDYRVRKRR+TLGSAGTPRTLE MM  LK+A G+KEF L+IKGDVQGSVEAIIGSLKK+ TDEV AR++HTGVGGITESD+ALA+ASKAIVIGFNVRAN QAK+ AD+QG+EIRYYNIIYDLVD+VKAAMSGLLAPT++E+FLG+A IKQVFNITKVGK+AG QVT+GKVERGA++RLLRDNVVI  EG L+ LKRFKDDV+EV +GQECG++
Sbjct:  446 GAYQVVAANGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAGVPMIVAINKIDKPQADPKRVQTDLLQHEIVVESMGGETLEVPVSALKRTNLDKLLEAIHLQAEILDLKVNPTRPAEGIVIEAKLERGRGPVGTVLVQRGTLKVGDIVVAGMAWGRVRALIDDHGANVPTAGPSVPVEILGFDSAPDAGDQFGVVENEARAREITDYRVRKRRETLGSAGTPRTLEQMMQTLKDAAGQKEFTLLIKGDVQGSVEAIIGSLKKLGTDEVIARVLHTGVGGITESDIALASASKAIVIGFNVRANEQAKRAADTQGIEIRYYNIIYDLVDDVKAAMSGLLAPTKREIFLGYAAIKQVFNITKVGKVAGCQVTEGKVERGAKVRLLRDNVVI-HEGSLAILKRFKDDVKEVTAGQECGMS 883          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A6N6SYM4_9HYPH (Translation initiation factor IF-2 n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SYM4_9HYPH)

HSP 1 Score: 687 bits (1774), Expect = 8.940e-241
Identity = 350/438 (79.91%), Postives = 397/438 (90.64%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV T  G KITFIDTPGHEAFTAMRARGAK TD+VVLVVAADDGVMPQTVEAINHAKAA VP+IVAINKIDKPD+DP RV T+LLQH +VVESMSG+ L+V VSA+K   LDKLLEAI LQAE+L+LKANPNR+A G VIEAKL+RGRGPVGT+LV+ GTLRVGDI+VAG AWGRVRALIDD+G  V+EAGP+VPVE+LGFDSAPEAGD F VVESEARAREITDYRVRKRR TLGSAGT RTLE MM QLKEAGRKEFPL++KGDVQGS+EAI G+LKK+ TDEV+AR++H+GVGGITESD+ALANASKA+V+GFNVR NAQAK LAD  G+EIRYYNIIYDLVD+VKAAMSGLLAPT +E+FLG+A I +VFNI+KVGK+AG +VT+GKVERGA++RL+RDNVVI  EG LSTLKRFKD+VREV +GQECG+A
Sbjct:  376 GAYQVATPDGQKITFIDTPGHEAFTAMRARGAKATDLVVLVVAADDGVMPQTVEAINHAKAANVPLIVAINKIDKPDADPTRVRTDLLQHAVVVESMSGETLEVEVSALKKMGLDKLLEAIHLQAELLDLKANPNRSAEGVVIEAKLERGRGPVGTVLVQHGTLRVGDIVVAGMAWGRVRALIDDRGETVQEAGPSVPVEILGFDSAPEAGDPFGVVESEARAREITDYRVRKRRQTLGSAGTARTLEQMMQQLKEAGRKEFPLLVKGDVQGSIEAIAGALKKLGTDEVEARIVHSGVGGITESDIALANASKAVVVGFNVRTNAQAKALADQSGVEIRYYNIIYDLVDDVKAAMSGLLAPTLREIFLGNAQILEVFNISKVGKVAGCRVTEGKVERGAKVRLIRDNVVI-HEGTLSTLKRFKDEVREVPAGQECGMA 812          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: D8JY83_HYPDA (Translation initiation factor IF-2 n=3 Tax=Hyphomicrobium TaxID=81 RepID=D8JY83_HYPDA)

HSP 1 Score: 688 bits (1775), Expect = 6.270e-240
Identity = 354/438 (80.82%), Postives = 399/438 (91.10%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV    G KITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKP +DP RV T+LL  EIVVESM G+ L+VPVSA+K TNLDKLLEAI LQAEIL+LKAN  RTA G VIEAKL+RGRGPVGT+LV+RGTL VGDIIVAG AWGRVRAL+DD G N+  AGP+VPVEVLGFD+APEAGD+F+VVE+EARARE+TDYRVRKRR+TLGSAG+  TLE MM QLK+A RKEFPLV+KGDVQGSVEAI G+L+K+  DEV+ARL+H+GVGGITESD+ALA ASKA+VIGFNVRANAQAKQ AD+QG+EIRYYNIIYDLVDEVKAAMSGLLAPT++EVFLG+A+IKQVFNI+KVGK+AG QVT+GKVERGA++RLLRDNVVI  EG L+ LKRFKDDV+EVV+GQECG++
Sbjct:  447 GAYQVKASNGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPQADPNRVRTDLLSQEIVVESMGGETLEVPVSALKRTNLDKLLEAIHLQAEILDLKANAARTAEGIVIEAKLERGRGPVGTVLVQRGTLHVGDIIVAGTAWGRVRALLDDHGANIDTAGPSVPVEVLGFDAAPEAGDQFAVVENEARARELTDYRVRKRRETLGSAGSKSTLEQMMQQLKDAERKEFPLVVKGDVQGSVEAIAGALRKVGNDEVEARLVHSGVGGITESDIALAAASKAVVIGFNVRANAQAKQAADNQGIEIRYYNIIYDLVDEVKAAMSGLLAPTKREVFLGYASIKQVFNISKVGKVAGCQVTEGKVERGAKVRLLRDNVVI-HEGTLAILKRFKDDVKEVVAGQECGMS 883          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A1E4C7D3_9HYPH (Translation initiation factor IF-2 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4C7D3_9HYPH)

HSP 1 Score: 687 bits (1772), Expect = 7.750e-240
Identity = 349/438 (79.68%), Postives = 399/438 (91.10%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV TD G KITFIDTPGH AFTAMRARGAKVTDIVVLVVAADDGVMPQT+EAINHAKAA VPIIVAINKIDKP +DP RV TELLQHEIVVESMSG+ L+V VSA+KGTNLDKLLEAI LQAE+L+LKANP+R A+G+VIEAKL+RGRGPVGTLLV+RGT++VGDIIVAG+AWGRVRAL+DD G NV  AGP+VPVEVLGFD+APEAGD+F+VVE+EARAREITDYR+RKRR+TLG+AGTPRTLE MM  LKE G+KEFPLV+KGDVQGSVEAI+G+L K+  DEV AR++H+GVGGITESD+ LANASKA+++GFNVRANAQAK  AD  G+EIRYY+IIYDLVD+VKAAMSGLLAPT+KEVFLG+ATIKQVFNI+K GK+AG  VT+GKVERGA++RLLRD  VI  EG L+ LKRFKDDV+EV +GQECG+A
Sbjct:  421 GAYQVSTDKGQKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPQADPNRVRTELLQHEIVVESMSGETLEVSVSALKGTNLDKLLEAIALQAELLDLKANPDRLADGFVIEAKLERGRGPVGTLLVQRGTIKVGDIIVAGSAWGRVRALLDDTGHNVVSAGPSVPVEVLGFDTAPEAGDQFAVVENEARAREITDYRIRKRRETLGTAGTPRTLEQMMQSLKETGKKEFPLVVKGDVQGSVEAIMGALAKLGNDEVMARIVHSGVGGITESDINLANASKAVILGFNVRANAQAKLAADQHGVEIRYYSIIYDLVDDVKAAMSGLLAPTKKEVFLGYATIKQVFNISKQGKVAGCLVTEGKVERGAKVRLLRDKTVI-HEGTLAILKRFKDDVKEVPAGQECGMA 857          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A2W4NBP7_9PROT (Translation initiation factor IF-2 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4NBP7_9PROT)

HSP 1 Score: 687 bits (1773), Expect = 1.840e-239
Identity = 354/438 (80.82%), Postives = 399/438 (91.10%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV T  G  ITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHA+AA VPIIVAINKIDKPD+DP RV TELLQHE+VVESMSGDVL+V VSA K  NLDKLLEAI LQAE+LELKANP+R+A GYVIEAKL+RGRGPVGTLLV+RGTL VGDI+VAG AWGRVRALI+D+G NV++AGP+VPVEVLGFD+APEAGD+F+VVESEARAREIT+YR+RKRR+TLGS GT RTLE MM QLKEAGRKEFPLV+K DVQGSVEAIIGSLKKISTDEV+AR+IH GVGGITESDV LA  + A+VIGFNVRANAQA+  A+ +G+EIRYYNIIYDLVD+VKAAMSGLLAPT +EVFLG+A I +VFNITKVGK+AG +VT+GKVERGA++RL+RDNVVI  EG L++LKRFKD+V+EV  GQECG+A
Sbjct:  459 GAYQVKTQAGETITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHARAANVPIIVAINKIDKPDADPNRVRTELLQHEVVVESMSGDVLEVEVSATKRMNLDKLLEAISLQAELLELKANPDRSAEGYVIEAKLERGRGPVGTLLVQRGTLHVGDIVVAGTAWGRVRALINDRGENVKDAGPSVPVEVLGFDTAPEAGDQFAVVESEARAREITEYRIRKRRETLGSVGTARTLEQMMQQLKEAGRKEFPLVVKADVQGSVEAIIGSLKKISTDEVEARIIHAGVGGITESDVTLAQTAGAVVIGFNVRANAQARAAAEREGVEIRYYNIIYDLVDDVKAAMSGLLAPTVREVFLGNAEILEVFNITKVGKVAGCRVTEGKVERGAKVRLIRDNVVI-HEGTLASLKRFKDEVKEVPVGQECGMA 895          
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Match: A0A2W4RVB3_9PROT (Translation initiation factor IF-2 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RVB3_9PROT)

HSP 1 Score: 686 bits (1769), Expect = 6.540e-239
Identity = 350/438 (79.91%), Postives = 402/438 (91.78%), Query Frame = 1
Query:    1 GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGDVLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRGRGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVEVLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAMMAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGGITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDEVKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGARLRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA 1314
            GAYQV T  G  ITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHA+AA VPIIVAINKIDKPD+DP RV TELLQHEIVVESMSGDVL+V VSA K  NLDKLLEAI LQAE+LELKANP+R+A G+VIEAKL+RGRGPVGTLLV+RGTL VGDI+VAG AWGRVRA+I+DKG NV+EAGP+VPVEVLGFDSAPEAGD+F+VVESEARAREIT+YR+RKRR+TLGS GT RTLE MM QLKEAG+KEFPLVIKGDVQGSVEAI+GSLKKIST+EV+AR+IH GVGG+TESDVALA  + A++IGFNVRANAQA+  A+ +G+EIRYYNIIYDLVD+VKAAMSGLLAPT +EVFLG+A + +VFNI+KVGK+AG +VT+GKVERGA++R++RDNVV+  EG L++LKRFKD+V+EV +GQECG+A
Sbjct:  455 GAYQVKTQAGETITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHARAAGVPIIVAINKIDKPDADPNRVRTELLQHEIVVESMSGDVLEVEVSATKRINLDKLLEAISLQAELLELKANPDRSAEGFVIEAKLERGRGPVGTLLVQRGTLHVGDIVVAGTAWGRVRAMINDKGENVKEAGPSVPVEVLGFDSAPEAGDQFAVVESEARAREITEYRIRKRRETLGSVGTARTLEQMMQQLKEAGKKEFPLVIKGDVQGSVEAIVGSLKKISTEEVEARVIHAGVGGVTESDVALAQTAGAVIIGFNVRANAQARAAAEREGVEIRYYNIIYDLVDDVKAAMSGLLAPTVREVFLGNAEVLEVFNISKVGKVAGCRVTEGKVERGAKVRVIRDNVVV-HEGTLASLKRFKDEVKEVPAGQECGMA 891          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18983.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XYM0_9HYPH2.300e-25283.33Translation initiation factor IF-2 n=1 Tax=Hyphomi... [more]
A0A1I7NTP5_9HYPH3.970e-24280.82Translation initiation factor IF-2 n=4 Tax=Hyphomi... [more]
A0A433ABS4_HYPSQ6.600e-24281.28Translation initiation factor IF-2 n=1 Tax=Hyphomi... [more]
F8JFL1_HYPSM1.600e-24181.28Translation initiation factor IF-2 n=2 Tax=unclass... [more]
A0A2S5MBA4_HYPSQ1.930e-24181.55Translation initiation factor IF-2 n=1 Tax=Hyphomi... [more]
A0A6N6SYM4_9HYPH8.940e-24179.91Translation initiation factor IF-2 n=1 Tax=Hyphomi... [more]
D8JY83_HYPDA6.270e-24080.82Translation initiation factor IF-2 n=3 Tax=Hyphomi... [more]
A0A1E4C7D3_9HYPH7.750e-24079.68Translation initiation factor IF-2 n=3 Tax=Alphapr... [more]
A0A2W4NBP7_9PROT1.840e-23980.82Translation initiation factor IF-2 n=1 Tax=Proteob... [more]
A0A2W4RVB3_9PROT6.540e-23979.91Translation initiation factor IF-2 n=1 Tax=Proteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18983contigP-wetherbeei_contig18983:1..1314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog670307.HYPDE_41583
Preferred nameinfB
PFAMsGTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N,IF2_assoc
Model size1314
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02519
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.09e-243
EggNOG OGsCOG0532@1|root,COG0532@2|Bacteria,1MV26@1224|Proteobacteria,2TQMY@28211|Alphaproteobacteria,3N6B5@45401|Hyphomicrobiaceae
DescriptionOne of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Cds size1314
COG categoryJ
BRITEko00000,ko03012,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186160.6723235-CDS-P-wetherbeei_contig18983:0..13141683186160.6723235-CDS-P-wetherbeei_contig18983:0..1314Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18983 1..1314 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18983.1.1prot_P-wetherbeei_contig18983.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18983 1..1314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18983.1.1

>prot_P-wetherbeei_contig18983.1.1 ID=prot_P-wetherbeei_contig18983.1.1|Name=mRNA_P-wetherbeei_contig18983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=438bp
GAYQVVTDGGHKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMP
QTVEAINHAKAAKVPIIVAINKIDKPDSDPKRVATELLQHEIVVESMSGD
VLDVPVSAIKGTNLDKLLEAIVLQAEILELKANPNRTANGYVIEAKLDRG
RGPVGTLLVERGTLRVGDIIVAGAAWGRVRALIDDKGINVREAGPAVPVE
VLGFDSAPEAGDEFSVVESEARAREITDYRVRKRRDTLGSAGTPRTLEAM
MAQLKEAGRKEFPLVIKGDVQGSVEAIIGSLKKISTDEVQARLIHTGVGG
ITESDVALANASKAIVIGFNVRANAQAKQLADSQGLEIRYYNIIYDLVDE
VKAAMSGLLAPTRKEVFLGHATIKQVFNITKVGKIAGAQVTDGKVERGAR
LRLLRDNVVILQEGKLSTLKRFKDDVREVVSGQECGIA
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mRNA from alignment at P-wetherbeei_contig18983:1..1314-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18983.1.1 ID=mRNA_P-wetherbeei_contig18983.1.1|Name=mRNA_P-wetherbeei_contig18983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig18983:1..1314- (Phaeothamnion wetherbeei SAG_119_79)
GGCGCCTATCAGGTCGTCACCGACGGCGGCCACAAGATCACGTTCATCGA CACTCCCGGCCACGAGGCGTTCACCGCCATGCGCGCGCGCGGCGCCAAGG TGACCGACATCGTCGTGCTCGTCGTTGCCGCCGACGACGGCGTGATGCCG CAAACGGTGGAGGCGATCAACCACGCCAAGGCGGCGAAGGTGCCGATCAT CGTGGCGATCAACAAGATCGACAAGCCGGACTCCGATCCCAAGCGCGTTG CCACCGAACTGCTCCAGCACGAGATCGTGGTGGAAAGCATGTCCGGCGAC GTGCTCGACGTGCCGGTCTCCGCCATCAAGGGCACGAACCTCGACAAGCT TCTCGAGGCGATCGTGCTGCAGGCCGAAATCCTCGAGTTGAAGGCCAACC CGAACCGCACCGCCAACGGCTACGTCATCGAAGCCAAGCTCGATCGCGGC CGTGGTCCGGTCGGCACGCTCCTCGTCGAGCGCGGCACGCTGCGCGTCGG CGATATCATCGTGGCGGGCGCGGCCTGGGGCCGTGTGCGCGCGCTGATCG ACGACAAGGGCATCAACGTCAGGGAAGCCGGACCCGCCGTCCCTGTCGAG GTCCTGGGCTTCGACAGCGCACCCGAAGCCGGCGACGAGTTTTCCGTCGT CGAGTCGGAAGCGCGTGCCCGCGAGATCACCGACTACCGCGTCAGGAAGC GCCGCGACACGCTAGGGTCCGCCGGCACGCCGCGCACGCTGGAAGCGATG ATGGCGCAGTTGAAGGAAGCTGGCCGCAAGGAGTTCCCGCTCGTCATCAA GGGCGACGTGCAGGGCTCGGTGGAAGCCATCATCGGCTCGCTGAAGAAGA TCTCGACCGACGAGGTGCAGGCACGCCTGATCCACACCGGCGTCGGCGGC ATCACCGAATCCGACGTAGCCCTCGCCAATGCGTCGAAGGCGATCGTGAT CGGCTTCAACGTCCGCGCCAACGCCCAGGCCAAGCAATTGGCCGACAGCC AGGGCCTCGAGATCCGCTACTACAACATCATCTACGATCTCGTGGATGAA GTGAAGGCGGCGATGTCGGGACTGCTCGCGCCGACGCGCAAGGAAGTCTT CCTCGGCCACGCGACGATCAAGCAGGTCTTCAACATCACGAAGGTCGGCA AGATCGCGGGCGCCCAGGTCACCGACGGCAAGGTCGAGCGCGGCGCGCGC CTTCGCCTGCTGCGCGACAACGTCGTGATCCTGCAGGAAGGCAAGCTCTC GACGCTGAAGCGCTTCAAGGACGACGTCCGCGAAGTCGTCTCCGGCCAGG AGTGCGGCATCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18983:1..1314-

>mRNA_P-wetherbeei_contig18983.1.1 ID=mRNA_P-wetherbeei_contig18983.1.1|Name=mRNA_P-wetherbeei_contig18983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig18983:1..1314- (Phaeothamnion wetherbeei SAG_119_79)
GGCGCCTATCAGGTCGTCACCGACGGCGGCCACAAGATCACGTTCATCGA
CACTCCCGGCCACGAGGCGTTCACCGCCATGCGCGCGCGCGGCGCCAAGG
TGACCGACATCGTCGTGCTCGTCGTTGCCGCCGACGACGGCGTGATGCCG
CAAACGGTGGAGGCGATCAACCACGCCAAGGCGGCGAAGGTGCCGATCAT
CGTGGCGATCAACAAGATCGACAAGCCGGACTCCGATCCCAAGCGCGTTG
CCACCGAACTGCTCCAGCACGAGATCGTGGTGGAAAGCATGTCCGGCGAC
GTGCTCGACGTGCCGGTCTCCGCCATCAAGGGCACGAACCTCGACAAGCT
TCTCGAGGCGATCGTGCTGCAGGCCGAAATCCTCGAGTTGAAGGCCAACC
CGAACCGCACCGCCAACGGCTACGTCATCGAAGCCAAGCTCGATCGCGGC
CGTGGTCCGGTCGGCACGCTCCTCGTCGAGCGCGGCACGCTGCGCGTCGG
CGATATCATCGTGGCGGGCGCGGCCTGGGGCCGTGTGCGCGCGCTGATCG
ACGACAAGGGCATCAACGTCAGGGAAGCCGGACCCGCCGTCCCTGTCGAG
GTCCTGGGCTTCGACAGCGCACCCGAAGCCGGCGACGAGTTTTCCGTCGT
CGAGTCGGAAGCGCGTGCCCGCGAGATCACCGACTACCGCGTCAGGAAGC
GCCGCGACACGCTAGGGTCCGCCGGCACGCCGCGCACGCTGGAAGCGATG
ATGGCGCAGTTGAAGGAAGCTGGCCGCAAGGAGTTCCCGCTCGTCATCAA
GGGCGACGTGCAGGGCTCGGTGGAAGCCATCATCGGCTCGCTGAAGAAGA
TCTCGACCGACGAGGTGCAGGCACGCCTGATCCACACCGGCGTCGGCGGC
ATCACCGAATCCGACGTAGCCCTCGCCAATGCGTCGAAGGCGATCGTGAT
CGGCTTCAACGTCCGCGCCAACGCCCAGGCCAAGCAATTGGCCGACAGCC
AGGGCCTCGAGATCCGCTACTACAACATCATCTACGATCTCGTGGATGAA
GTGAAGGCGGCGATGTCGGGACTGCTCGCGCCGACGCGCAAGGAAGTCTT
CCTCGGCCACGCGACGATCAAGCAGGTCTTCAACATCACGAAGGTCGGCA
AGATCGCGGGCGCCCAGGTCACCGACGGCAAGGTCGAGCGCGGCGCGCGC
CTTCGCCTGCTGCGCGACAACGTCGTGATCCTGCAGGAAGGCAAGCTCTC
GACGCTGAAGCGCTTCAAGGACGACGTCCGCGAAGTCGTCTCCGGCCAGG
AGTGCGGCATCGCG
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