mRNA_P-wetherbeei_contig1897.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE) HSP 1 Score: 208 bits (530), Expect = 2.520e-55 Identity = 96/217 (44.24%), Postives = 141/217 (64.98%), Query Frame = 3
Query: 162 DGAGNRQ-GRQLPRGVDMA--SFDWMTQEERDMVARYGFEWDEFGGGFSFDQVLSALRRYKKLHGSVSVPGDYVVPFDYEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVFQEW 803
DG +RQ GR+L G A S +W T E+R+ + GFEWDEFG GF +D V++ L YK L+G + D+ VP DYEWP EL+G+ LG +C+Q+R GDI+ + D +R+ L LGFDWG +D+ YLYFQ+ EVL ++ ++G + V P +V+P +DPWPLPL G P+G +N++R Q+D L +HY +RF ++ +MG +W + +W
Sbjct: 828 DGMIDRQKGRRLIPGCSTAGSSLEWCTDEDRERILEVGFEWDEFGDGFRWDDVVAGLTLYKTLYGELP-DDDFQVPVDYEWPIELSGMQLGSICKQMRIGDIWAKHDPKRKKVLKQLGFDWG-----DDELYLYFQWPEVLISFYSVIKLKGHLDVSPQYVIPHEDPWPLPLHGTPVGLYLNIIRAQKDLLMEHYPERFEILRSMGIMWNEPLLVDW 1038
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A835Z154_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z154_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.750e-41 Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 3
Query: 519 RTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVFQEWEGLEVEGV 827
R GA DD +L FQYDEVLCGLFA+ +IRGD+CV DWVVPD DPWP+PLRGLPLGFLVN+VR QRD L +HY +R+ M+D +GF WL VF++W+ + V GV
Sbjct: 7 REEGA-DDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGV 108
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A7S2W9V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9V7_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.660e-35 Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 3
Query: 303 DQVLSALRRYKKLHGSVSVPGDYVVPFDYEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVFQEWE 806
++V S LR ++ ++ ++ +WP+EL GL +G ++R GD G++D ERRA LDA+GF WG ++ YLYF ++ V+ L ++ GD+CVR D+ +P PWP G PLG VN++R Q+D L+ Y DR+ M+ M F+W+PA F + E
Sbjct: 27 EEVKSKLRAKARIERAIESLEHKAKIYEIDWPKELGGLPMGVYVHKMRVGDAKGKQDPERRAKLDAIGFTWG-----DESKYLYFNFNHVVLALSRYRKFYGDLCVRADYTIPKAQPWPPGWEGAPLGEAVNIIRAQKDLLQHEYPDRYRMLCMMDFLWVPASFTDDE 189
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A7S3JX66_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX66_9STRA) HSP 1 Score: 133 bits (335), Expect = 8.340e-30 Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 3
Query: 393 WPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYF---QYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVF 794
WP EL GL LG + + LR GDI+ E+ +RRAALD +GFDWG D +Y Q+ L LF++ I+G + + D+V+PD+DPWPLPLRG LG VN++R Q LR H+ R ++DAMGFV+LP +F
Sbjct: 624 WPAELHGLKLGFITEALRVGDIFAYEEPKRRAALDRIGFDWG-------DREIYIRGLQWHHFLACLFSYSKIKGSLSIAWDFVIPDEDPWPLPLRGEHLGTKVNLIREQESVLRTHFKHRAQLLDAMGFVFLPPMF 753
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: F0YNU5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU5_AURAN) HSP 1 Score: 133 bits (334), Expect = 1.090e-29 Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 3
Query: 393 WPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLY-FQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVFQEWE 806
WP GL LG V + LR GD+ +D RRAALD LGFDWG + D Y+ Q+D L LF+H I+G V V D+VVPD+DPWP PLR PLG VN VR Q+ T H+ +R +D MGF WLP VF+ E
Sbjct: 542 WPERCRGLGLGAVVEALRVGDVAAWDDPARRAALDGLGFDWG-----DRDVYVEGLQWDAFLACLFSHSKIKGTVNVDWDFVVPDEDPWPFPLRASPLGRWVNEVRDQQRTFDAHFGERKRFLDLMGFQWLPPVFEAGE 675
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A8J2SVI2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVI2_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.690e-28 Identity = 84/268 (31.34%), Postives = 112/268 (41.79%), Query Frame = 3
Query: 204 VDMASFDWMTQEERDMVARYGFEWDEFGGGFSFDQVLSALRRYKKLHGSVSVPGDYVVPFD--------------------------------------------------------------------YEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWG--RTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAVFQ 797
D + EE G+ +D+F GGF F V+ ALR Y+ G++ VP D+VVP D WP GL LG LR GD R D+E+R LD LGF+WG R +G ++E L LF+ I+G + VR D+VVP++DPWPLPLR PLG VN VR Q+ +H+ +R +D MGF WLP +F+
Sbjct: 371 ADFLDESLIAPEELQRRQSEGWRFDDFDGGFDFADVVDALREYQTRFGNLDVPVDFVVPEDDGVEEEGVEEEVEDLDAALAAFLSAASPSEDEDAALLGDFPSLDEEPSEADLLALEESYVEPSAVEKETPWPEHTRGLLLGRAVDALRVGDA--RVDDEQRQTLDELGFEWGDRRISG--------LSWNEFLGCLFSFSKIKGSLNVRWDFVVPNEDPWPLPLRNAPLGRWVNEVRAQQPVFERHFAERKRFLDLMGFKWLPPLFE 628
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A482RVD4_9ARCH (HA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVD4_9ARCH) HSP 1 Score: 120 bits (300), Expect = 6.940e-26 Identity = 65/177 (36.72%), Postives = 102/177 (57.63%), Query Frame = 3
Query: 264 GFEWDEFGGGFSFDQVLSALRRYKKLHGSVSVPGDYVVPFDYE-----WPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVW 779
G+ + EF G +S+ +V++AL YK G ++VP + + + EL GL LG V Q LR GD+ G +D +RR LDA+GFDWG +L+F++ ++ GL ++ +RG V D+VVP + WP+ + G PLG + + R Q+ TLR+HY +RF ++D +W
Sbjct: 291 GYRYFEFDG-YSWSEVVAALLAYKSTFGDLNVPSYFSLTASTLSAFPLFSEELFGLPLGQVVQALRWGDVDGFDDPDRRTLLDAMGFDWGDVT-----QHLHFRFSFLVHGLRIYQRVRGVSLVPEDFVVPCEPTWPVWMVGAPLGEWLALARIQQQTLRRHYPERFRLLDNFRPIW 461
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A1E7F5I2_9STRA (HA domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5I2_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.520e-24 Identity = 69/233 (29.61%), Postives = 115/233 (49.36%), Query Frame = 3
Query: 180 QGRQLPRGVDMASFDWMTQEERDMVARYGFEWDEFGGGFSFDQVLSALRRYKKLHGSVS--VPGDYVVP--------FD-----------------YEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDP--YLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAV 791
+GR L GV + D +R + D+FGG F F+ V+ AL YK+ +G+ S GD+V+P FD +WP L G+ L + +++ G + + ER+A LDA+ F+WG DP +L +++ +C ++A ++RGD+ V PD+V+PD+DPWP L G LG V +R ++ + ++ ++ + FVW P +
Sbjct: 537 RGRALEAGV-IEDTDSKRPTKRTREPEIPWFNDDFGGYFVFEDVVEALTLYKESYGAFSNITIGDFVIPVKDEPEHSFDDDGILSPEEEFAADREEIDWPEHLEGMRLSDIVKRINDGSLEVKHLPERKAQLDAIDFEWG-------DPKHFLEVPFEKAMCAMYAFYMVRGDMFVPPDYVMPDEDPWPRALAGYELGKAVKRIRELQNFFEAFHTEKVGLLRMIDFVWFPTL 761
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A7S0Y730_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y730_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.280e-23 Identity = 64/223 (28.70%), Postives = 105/223 (47.09%), Query Frame = 3
Query: 276 DEFGGGFSFDQVLSALRRYKKLHGSVS--VPGDYVVP------------FD-------------------------------------YEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAV 791
D+FGG F F+ V+ A YK+ +G S G++V+P FD EWP L G+ L + +++R G + + ER+A LDA+ FDWG ED +L +++ +C ++A ++RGD+ V PD+V+PD+DPWP L G LG V +R ++ ++++ T++ + FVW P +
Sbjct: 432 DDFGGYFVFEDVVEAFTLYKQNYGDFSNLTSGEFVIPVKEEAEHSFDDDFDDDMPIDPRFADETSITDDDIEAEISRLESSMLAEEDGTEWPEHLEGMRLADIFKRIRDGSLEVKHLAERKAELDAIDFDWG-----EDKYFLDVPFEKAMCAMYAFYMVRGDMFVPPDYVMPDEDPWPRALAGYELGKAVKRIRELQNFFEGFHVEKVTLLRMIDFVWFPTL 649
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Match: A0A7S2XQ61_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ61_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.360e-23 Identity = 49/149 (32.89%), Postives = 88/149 (59.06%), Query Frame = 3
Query: 345 GSVSVPGDYVVPFDYEWPRELAGLSLGPVCQQLRCGDIYGREDEERRAALDALGFDWGRTAGAEDDPYLYFQYDEVLCGLFAHKIIRGDVCVRPDWVVPDQDPWPLPLRGLPLGFLVNMVRWQRDTLRKHYLDRFTMIDAMGFVWLPAV 791
G ++ GD V+P +WP LAG+ LG V +++R G + + +R+A LDA+GFDWG +L +++ +C ++++ +IRGD+ V D+V+P +PWP L G LG V +R ++ L +++ ++ ++ + FVW P +
Sbjct: 108 GVQTIDGDNVMPVSNQWPEHLAGMGLGNVVKRIRNGCLEVKHLADRKAQLDAIGFDWGNELS-----WLEIPFEKAMCAMYSYYLIRGDMFVYEDFVMPSDEPWPRALAGYKLGETVKRLRELQEFLEEYHPEKVALLRMVEFVWFPDI 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1897.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1897.1.1 >prot_P-wetherbeei_contig1897.1.1 ID=prot_P-wetherbeei_contig1897.1.1|Name=mRNA_P-wetherbeei_contig1897.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=374bp MSNLGSKGMGGDAQLSGRAPPTPLSASAAIPLSPEAQLLLDANGGADGAGback to top mRNA from alignment at P-wetherbeei_contig1897:2..1855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1897.1.1 ID=mRNA_P-wetherbeei_contig1897.1.1|Name=mRNA_P-wetherbeei_contig1897.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1854bp|location=Sequence derived from alignment at P-wetherbeei_contig1897:2..1855+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1897:2..1855+ >mRNA_P-wetherbeei_contig1897.1.1 ID=mRNA_P-wetherbeei_contig1897.1.1|Name=mRNA_P-wetherbeei_contig1897.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig1897:2..1855+ (Phaeothamnion wetherbeei SAG_119_79)back to top |