mRNA_P-wetherbeei_contig18939.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18939.1.1
Unique NamemRNA_P-wetherbeei_contig18939.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A352D8E6_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A352D8E6_9BACT)

HSP 1 Score: 262 bits (670), Expect = 1.410e-84
Identity = 131/199 (65.83%), Postives = 161/199 (80.90%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSD 597
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+P RG PA++++ TI A+ LE+ L+EYADE  A+EIA AIK++  PV TT +LAE +   L+KL P+  +  V+K+LQRTFMALRIAVN+E +VLD FLD+LP CL PG RVAILSFHSGEDRRVK+AF   ++ G+YS+IAP P R S EE+R NPRSA AKLRWAIRSD
Sbjct:  133 DLGVSSMQLDNPARGFTYKADGPLDLRLNPGRGKPAADLLNTISAEALEKILFEYADEPQAKEIALAIKAALLPVNTTARLAEAVSEGLKKLDPKIDDPSVKKALQRTFMALRIAVNEELSVLDRFLDILPWCLKPGGRVAILSFHSGEDRRVKKAFLRGEEAGVYSKIAPAPQRPSPEERRGNPRSACAKLRWAIRSD 331
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1J4SMZ0_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium CG1_02_56_21 TaxID=1805132 RepID=A0A1J4SMZ0_9BACT)

HSP 1 Score: 261 bits (667), Expect = 6.990e-84
Identity = 129/199 (64.82%), Postives = 163/199 (81.91%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSD 597
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+P RG PASEM+ TI A+ LE+ L++Y DE +A++IA+AIK+SR PV TT +LA+ I+  L+KL  +  +S + KSLQRTFMALRI VN+E +VLD FL++LP CL PG R+AILSFHSGEDRRVK+AFA  ++ GLYS+IAPTP+R S  E+R N RS+ AKLRWA+RSD
Sbjct:  151 DLGVSSMQLDNPERGFTYKADGPLDLRLNPGRGKPASEMLRTISAEALEKMLFDYGDEPHAKDIAKAIKTSRVPVVTTARLADTIREGLKKLHSKISDSIINKSLQRTFMALRIGVNEELSVLDRFLELLPWCLKPGGRIAILSFHSGEDRRVKKAFARGEETGLYSKIAPTPVRPSPAERRGNSRSSCAKLRWAVRSD 349
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1F9SQS9_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium GWC2_61_19 TaxID=1797932 RepID=A0A1F9SQS9_9BACT)

HSP 1 Score: 256 bits (655), Expect = 4.560e-82
Identity = 124/198 (62.63%), Postives = 160/198 (80.81%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRS 594
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+PERG P +E++  + AD LE+ L++YADE +A+ IARAIK S  PV+TT +LA I++  L++   +  E  +RKSLQRTFMALRIAVN+E +VLD  LD+LP CL PG RVAIL+FHSGEDRRVK++FA  ++ G+Y+ ++PTP+R S EE+ SNPRSA AKLRWA+RS
Sbjct:  151 DLGVSSMQLDNPERGFTYKADGPLDLRLNPERGRPVAELLKAVTADALEKILFDYADEPHAKTIARAIKESAVPVKTTAELARIVREGLKEAHTKLDEEVIRKSLQRTFMALRIAVNEELSVLDRLLDILPWCLKPGGRVAILTFHSGEDRRVKKSFARGEEAGVYASVSPTPIRPSVEERHSNPRSACAKLRWALRS 348
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A349PDR8_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A349PDR8_9BACT)

HSP 1 Score: 256 bits (654), Expect = 6.460e-82
Identity = 127/198 (64.14%), Postives = 157/198 (79.29%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRS 594
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+PERG P S+M+ ++ A+ LE+ L++YADE +AR IARAIK S  PV TT  LA+ ++  L+    +  E  +RKSLQRTFMALRIAVN+E +VLD FLD+LP CL PG R AIL+FHSGEDRRVK++FA  ++ G+YS IAPTP+R S EE+  NPRSA AKLRWAIRS
Sbjct:  151 DLGVSSMQLDNPERGFTYKADGPLDLRLNPERGRPVSDMLKSVTAEALEKILFDYADEPHARTIARAIKESPVPVTTTAALAKTVRERLKAAHAKLDEEIIRKSLQRTFMALRIAVNEELSVLDRFLDILPWCLKPGGRAAILTFHSGEDRRVKKSFARGEEAGIYSSIAPTPIRPSAEERHGNPRSACAKLRWAIRS 348
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1F9RF03_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium GWA2_62_23 TaxID=1797924 RepID=A0A1F9RF03_9BACT)

HSP 1 Score: 254 bits (648), Expect = 5.220e-81
Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSDLAL 606
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+PERG P +E++ TI    LE+ L EYADE +AR IARAIK S T + TT +LA  ++  L+K   R  +  ++KSLQR FMALRIAVN+E +VL+  L+ LP CL PG RVAILSFHSGEDRRVK+AFA  +Q G+YS +APTP+R S +E+RSNPRSA AKLRWA+RSD  L
Sbjct:  152 DLGVSSMQLDNPERGFTYKADGPLDLRLNPERGKPVAELLKTISEPALEKVLAEYADEPHARTIARAIKESATAITTTGELARTVRDGLKKEHARLGDDLIKKSLQRVFMALRIAVNEELSVLERLLEALPWCLRPGGRVAILSFHSGEDRRVKKAFARGEQEGIYSSVAPTPVRPSPQERRSNPRSACAKLRWAVRSDKPL 353
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1F9QGN6_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium GWA2_61_42 TaxID=1797923 RepID=A0A1F9QGN6_9BACT)

HSP 1 Score: 252 bits (644), Expect = 2.040e-80
Identity = 125/199 (62.81%), Postives = 157/199 (78.89%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSD 597
            DLGVSSMQ+DNP RGFT+K++GPLDLRL+PERG PA+E++ ++ A  LE+ L+EYADE YAR IA A+K S  P+ TT +LA  ++  L+K   + +E  V+KSLQRTFMALRIAVN+E +VLD FL++LP CL PG R AILSFHSGEDRRVK+AF   +  G+YS +A +P+R S EE+ SNPRSA AKLRWAIRSD
Sbjct:  151 DLGVSSMQLDNPERGFTYKAEGPLDLRLNPERGRPAAELLRSVSAAALEKILFEYADEPYARIIALAVKDSPLPIRTTAELAAAVRSGLKKADGKLEEDVVKKSLQRTFMALRIAVNEELSVLDRFLEILPWCLRPGGRAAILSFHSGEDRRVKKAFLRGEAAGVYSSVAASPIRPSSEERHSNPRSACAKLRWAIRSD 349
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1E4EZ39_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4EZ39_9BACT)

HSP 1 Score: 249 bits (635), Expect = 4.140e-79
Identity = 124/202 (61.39%), Postives = 154/202 (76.24%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSDLAL 606
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+PE+G PASE++  +   +LE+ L EYADE YA++IARAI  S  P  TT QL ++++  L  L    +E  V+KSL RTFMALRIAVN+E +VLDHFL+VLP CL PG RVAILSFHSGEDRRVK AFA+  +  +Y  I+P P+ A + E+R+NPRS PAKLRWA+RS   L
Sbjct:  150 DLGVSSMQLDNPARGFTYKADGPLDLRLNPEKGRPASELLKAVTLPRLEKILSEYADEPYAKDIARAILRSPNPPSTTAQLTKLVRSGLGNL----EEKHVKKSLARTFMALRIAVNEELSVLDHFLEVLPYCLKPGGRVAILSFHSGEDRRVKRAFAIGLEEAVYETISPAPILAGEAERRANPRSIPAKLRWAVRSTKPL 347
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A2N2ENF5_9BACT (Ribosomal RNA small subunit methyltransferase H n=3 Tax=unclassified Elusimicrobia TaxID=1797919 RepID=A0A2N2ENF5_9BACT)

HSP 1 Score: 248 bits (634), Expect = 6.810e-79
Identity = 127/198 (64.14%), Postives = 149/198 (75.25%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRS 594
            DLGVSSMQ+DNP RGFT+K+DGPLDLRL+PERG PASE +  + ADKL   L E ADE +AR IA A+K S   + TT  LAE +KGAL++  P+  E  V+KSLQR FMALRI VN EF+ LD FL  LP CL PG R AIL+FHSGEDRRVK+AFA  +  GLY+ +APTP R S  E+RSNPRSA AKLRWA+RS
Sbjct:  151 DLGVSSMQLDNPERGFTYKADGPLDLRLNPERGRPASEFLKAVSADKLAALLEENADEPHARTIAAAVKESPAAILTTADLAETVKGALKRAHPKLGEDIVKKSLQRVFMALRIEVNDEFSALDRFLAALPWCLKPGGRAAILTFHSGEDRRVKKAFAKGEAEGLYAAVAPTPARPSSAERRSNPRSACAKLRWAVRS 348
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A1F9Y2P7_9BACT (16S rRNA (Cytosine(1402)-N(4))-methyltransferase n=1 Tax=Elusimicrobia bacterium RIFOXYA2_FULL_69_6 TaxID=1797963 RepID=A0A1F9Y2P7_9BACT)

HSP 1 Score: 241 bits (616), Expect = 2.820e-78
Identity = 119/192 (61.98%), Postives = 149/192 (77.60%), Query Frame = 1 
Query:   19 MQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRS 594
            MQ+DNP RGFT+KSDGPLDLRL+P RG  ASE++ ++ A  LE+ L+E ADE YA+ IA+A+K+S  PV TT QLA  +K  L+KL  R  + +++KSLQR FMALRI VN+E + LD FL+ LP CL PG R AILSFHSGEDRRV++AFA     G+Y+E+APTP+R S EE+RSNPRSA AKLRWA+RS
Sbjct:    1 MQLDNPERGFTYKSDGPLDLRLNPGRGKTASELLRSLSAGALEKMLFENADETYAKHIAQAVKASTPPVATTAQLAAAVKAGLKKLNSRLPDEEIKKSLQRVFMALRIGVNEELSALDRFLEALPWCLKPGGRAAILSFHSGEDRRVRKAFARGAAEGVYAEVAPTPVRPSPEERRSNPRSACAKLRWAVRS 192
[Close]
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Match: A0A3D1N215_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A3D1N215_9BACT)

HSP 1 Score: 236 bits (603), Expect = 3.900e-74
Identity = 120/202 (59.41%), Postives = 153/202 (75.74%), Query Frame = 1 
Query:    1 DLGVSSMQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYADEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQRTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEAFALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSDLAL 606
            DLGVSSMQ+D+P RGFT+K +GPLDLR +P RG PASE++ +I  + L + L   +DE +A  IARAIK S TP+ TT QLA+ ++ AL KL  +  ++ +++SLQR FMALRI VN+E +VLD FLD LP CL PG R A+LSFHSGEDRRVK+AFA  ++ G+YS IAPT LR S EEQR+N RS+ AKLRWAIRS + +
Sbjct:  157 DLGVSSMQLDDPRRGFTYKFEGPLDLRFNPARGVPASELLKSISFNALTKLLSGNSDEPHAEVIARAIKGSLTPINTTVQLADTVRAALEKLPLKETDNAIKRSLQRVFMALRIGVNEELSVLDRFLDALPWCLKPGGRAAVLSFHSGEDRRVKKAFANGEKSGIYSGIAPTCLRPSPEEQRNNSRSSCAKLRWAIRSAIPI 358
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18939.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352D8E6_9BACT1.410e-8465.83Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1J4SMZ0_9BACT6.990e-8464.82Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1F9SQS9_9BACT4.560e-8262.63Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A349PDR8_9BACT6.460e-8264.14Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1F9RF03_9BACT5.220e-8163.37Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1F9QGN6_9BACT2.040e-8062.81Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1E4EZ39_9BACT4.140e-7961.39Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2N2ENF5_9BACT6.810e-7964.14Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A1F9Y2P7_9BACT2.820e-7861.9816S rRNA (Cytosine(1402)-N(4))-methyltransferase n... [more]
A0A3D1N215_9BACT3.900e-7459.41Ribosomal RNA small subunit methyltransferase H n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18939contigP-wetherbeei_contig18939:2..613 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog903818.KI912268_gene1338
PFAMsMethyltransf_5
Model size612
Max annot lvl57723|Acidobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.43e-67
EggNOG OGsCOG0275@1|root,COG0275@2|Bacteria,3Y31S@57723|Acidobacteria
DescriptionSpecifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
Cds size594
COG categoryJ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186159.4678106-UTR-P-wetherbeei_contig18939:1..191683186159.4678106-UTR-P-wetherbeei_contig18939:1..19Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18939 2..19 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186159.4799857-CDS-P-wetherbeei_contig18939:19..6131683186159.4799857-CDS-P-wetherbeei_contig18939:19..613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18939 20..613 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18939.1.1prot_P-wetherbeei_contig18939.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18939 20..613 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18939.1.1

>prot_P-wetherbeei_contig18939.1.1 ID=prot_P-wetherbeei_contig18939.1.1|Name=mRNA_P-wetherbeei_contig18939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp
MQIDNPTRGFTFKSDGPLDLRLDPERGFPASEMIVTIGADKLERFLYEYA
DEAYAREIARAIKSSRTPVETTTQLAEIIKGALRKLRPRPQESDVRKSLQ
RTFMALRIAVNQEFTVLDHFLDVLPQCLNPGARVAILSFHSGEDRRVKEA
FALAKQYGLYSEIAPTPLRASDEEQRSNPRSAPAKLRWAIRSDLALD*
back to top

mRNA from alignment at P-wetherbeei_contig18939:2..613+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18939.1.1 ID=mRNA_P-wetherbeei_contig18939.1.1|Name=mRNA_P-wetherbeei_contig18939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=612bp|location=Sequence derived from alignment at P-wetherbeei_contig18939:2..613+ (Phaeothamnion wetherbeei SAG_119_79)
GACCTGGGCGTGTCTTCGATGCAGATCGACAATCCGACCCGTGGCTTCAC
GTTCAAGTCGGATGGGCCGCTGGATTTGCGTCTGGACCCTGAGCGCGGGT
TTCCGGCGTCGGAGATGATTGTCACGATCGGCGCCGACAAGCTCGAGCGC
TTCCTCTACGAATACGCCGACGAGGCCTACGCCCGCGAGATCGCGCGCGC
TATCAAGAGCAGCCGGACTCCCGTGGAGACGACCACGCAGCTCGCGGAAA
TCATCAAGGGGGCCTTGCGGAAGCTACGACCGCGCCCTCAGGAGAGCGAC
GTGCGCAAATCGCTGCAGCGCACCTTCATGGCGCTGCGCATCGCGGTGAA
CCAGGAGTTTACGGTCCTCGACCATTTTCTGGACGTGCTGCCGCAGTGCT
TGAATCCGGGGGCCCGCGTGGCTATCCTCTCGTTTCATTCTGGCGAGGAC
CGGAGAGTCAAGGAAGCTTTCGCGCTGGCCAAGCAGTACGGCTTGTATTC
AGAAATCGCGCCCACGCCTTTGCGCGCGAGTGACGAAGAGCAGCGCAGCA
ACCCCCGCTCGGCGCCGGCCAAGCTGAGATGGGCGATTCGCTCGGACCTC
GCTTTGGATTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18939:2..613+

>mRNA_P-wetherbeei_contig18939.1.1 ID=mRNA_P-wetherbeei_contig18939.1.1|Name=mRNA_P-wetherbeei_contig18939.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig18939:2..613+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGATCGACAATCCGACCCGTGGCTTCACGTTCAAGTCGGATGGGCC
GCTGGATTTGCGTCTGGACCCTGAGCGCGGGTTTCCGGCGTCGGAGATGA
TTGTCACGATCGGCGCCGACAAGCTCGAGCGCTTCCTCTACGAATACGCC
GACGAGGCCTACGCCCGCGAGATCGCGCGCGCTATCAAGAGCAGCCGGAC
TCCCGTGGAGACGACCACGCAGCTCGCGGAAATCATCAAGGGGGCCTTGC
GGAAGCTACGACCGCGCCCTCAGGAGAGCGACGTGCGCAAATCGCTGCAG
CGCACCTTCATGGCGCTGCGCATCGCGGTGAACCAGGAGTTTACGGTCCT
CGACCATTTTCTGGACGTGCTGCCGCAGTGCTTGAATCCGGGGGCCCGCG
TGGCTATCCTCTCGTTTCATTCTGGCGAGGACCGGAGAGTCAAGGAAGCT
TTCGCGCTGGCCAAGCAGTACGGCTTGTATTCAGAAATCGCGCCCACGCC
TTTGCGCGCGAGTGACGAAGAGCAGCGCAGCAACCCCCGCTCGGCGCCGG
CCAAGCTGAGATGGGCGATTCGCTCGGACCTCGCTTTGGATTAG
back to top