mRNA_P-wetherbeei_contig1892.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1892.1.3
Unique NamemRNA_P-wetherbeei_contig1892.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835YUK9_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK9_9STRA)

HSP 1 Score: 262 bits (669), Expect = 7.860e-77
Identity = 152/354 (42.94%), Postives = 212/354 (59.89%), Query Frame = 3
Query:  885 DTYKHNLYGL-DKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSG--LSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSVYTKPNQ--FDHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNPERSVRIQSEKKVHACRKRLPVFLELQRLQG-QPDP-LYRSCIGT 1922
            +T  H L+GL    ++  VL+  +   INALR+P+SL LAL+          V   G+C +    L+WD+L+RLF  AA RG++IVLDMH L+   N  ++LWY+ K+++  FI+GW  +L RF  K  LM IDL NEPHGAA+WGLG   TDW  AA  I+  + +  P Y+ L FVEG+  +       P+   FD +WG NLDG+  HPI   +  L   LVY+PHVYGP V + Q +F  + FP NMP+IWD Q+GF+E  T G+A V G WGGSY GQD++ Q+  + Y+++ C++DNF WA+NP       S   +       PV  +LQ L   QP+P ++ S I +
Sbjct:   44 ETESHVLHGLWGATTMERVLNFCQANKINALRVPVSLDLALNS-------KTVVARGSCQECSAELAWDMLDRLFVMAAARGIVIVLDMHRLDQYNN--SDLWYDGKHTQDQFIQGWGDLLTRFGDKANLMGIDLKNEPHGAATWGLG-SATDWNAAAVYIVKKIKERVPGYNKLIFVEGVGTDGAIAQYPPSDPAFDKFWGQNLDGVISHPIDFGTPELNSLLVYSPHVYGPSVAD-QVYFKDATFPANMPSIWDKQVGFVEDAT-GKALVTGAWGGSYAGQDKLWQDAWADYMIDRCIADNFVWALNPNSG----SNGGLLEADWSTPVVTKLQLLAKIQPNPSVFTSAISS 381          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835ZC46_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC46_9STRA)

HSP 1 Score: 262 bits (669), Expect = 8.820e-77
Identity = 144/310 (46.45%), Postives = 193/310 (62.26%), Query Frame = 3
Query:  897 HNLYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPD--SGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSVY----TKPNQFDHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNPERS 1805
            H L+G    ++  VL   +   INALRIP+SL LAL P  +          G+C +  +G SWDVL+ LFG+AA +G+LI+LDMH L  +Q    ELW+++ +SEAD +KGW  +L+RF   P L+ IDL NEPHG A+WG+G K TDW  AA RI+ A+  A+P ++ L FVEG+       Y    T+   +   WGGNLDG+   PI   S  L   LVY+PHVYGP V + Q +F ++ FP+NMP IWD Q G+IE  + G+A V GEWGG YTGQD++ Q     YL + C+ DNF W +NP+ S
Sbjct:   65 HGLWG-GATTMDRVLKFCRENKINALRIPVSLSLALDPDTKVQ-------AGSCDECSTGRSWDVLDALFGKAAAKGVLILLDMHRLNNQQQ--GELWWDNTHSEADLVKGWVNLLKRFGQTPNLLGIDLKNEPHGQATWGMG-KSTDWDAAAVRIVTAIKSAYPAFNRLIFVEGV--GTEGTYHMFNTQHPSYYKNWGGNLDGVSYKPIDFGSKDLNDLLVYSPHVYGPSVAD-QPYFNTATFPDNMPGIWDEQFGWIEGSS-GKAVVTGEWGGWYTGQDKLWQEAWVKYLRSRCLGDNFVWCINPDSS 359          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835YRP3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.520e-72
Identity = 135/301 (44.85%), Postives = 183/301 (60.80%), Query Frame = 3
Query:  924 SIGNVLDVLKMRGINALRIPISLQLALSPWQ--QANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHN-------APSVYTKPNQFDHWWGGNLDGLYDHPIKLSG-ALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNP 1796
            ++ N+L  +++ G NALRIP+SL LAL+P    +   C    G        LSW VL+ LF  AA  G+LI+LDMH L+      + LWY++ ++EADFIKGW A+L +F  K  L+ ID+ NEP G  +WG G K TDW LAA RI+  +    P YS L FVEG   +       A SV      +  + G NLDG+  +PI     AL K LVY+PHVYGPDV+  Q +F ++ FP+NM AIWD+Q+GF+++ T G A V GEWGG++ G D +     + YLV+ C +DNFFW +NP
Sbjct:   33 NMNNILGEMRVLGFNALRIPLSLDLALAPKTVIEDTACDLCGGQ-------LSWKVLDDLFDLAAAYGILILLDMHRLDKVTQ--SNLWYDETHTEADFIKGWVAILTKFGGKANLLGIDVKNEPQGECTWGTGNKLTDWNLAAERIVKGIVAKVPTYSKLIFVEGTASDFQAQQPPANSVAPADMAYYKFAGQNLDGVKTNPIDFGDPALNKLLVYSPHVYGPDVFA-QPYFAAANFPKNMAAIWDLQMGFLKQAT-GSAVVTGEWGGNFLGDDLMWATAWTSYLVDKCFNDNFFWVINP 322          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A4D9CU83_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU83_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.880e-69
Identity = 123/305 (40.33%), Postives = 180/305 (59.02%), Query Frame = 3
Query:  885 DTYKHNLYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSVYTKPNQFDHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNP 1796
            D   H L+G   +++ + LD+L     NA+R+P S++LAL+        G+V    +   S  S  ++ +L  EA  RGM+++LD H L+P++ I+ +LWY++ Y E   ++ W+ +L RFK+   + A+DL NEPHG  SWG G   TDW  A+ RII  +  AHPD+ GLFFV GIW              HWWGGN   + +HP+ + S  L +++VY PHVYGPDV+  Q +F S  FP+N+PA+WD+  GF+  V    A V+ EWGG   G+D   Q  ++ YL    M+DNF+W +NP
Sbjct:   46 DNCVHGLWGGLSKTLTDYLDLLAFHSFNAIRLPFSVKLALALDTTYPEPGFVQADASL-SSLTSGQIMEKLVEEAGKRGMMVMLDQHRLDPDRGIS-DLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGG----------GHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFP-QSYFSSWSFPDNLPAVWDLHWGFLSGVLE-TAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNP 336          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835YQS7_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.150e-68
Identity = 136/293 (46.42%), Postives = 179/293 (61.09%), Query Frame = 3
Query:  930 GNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGI--WHNAPSVYTKPN-QFDHWWGGNLDGLYDHPIKLSG-ALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNP 1796
            G VL  ++  G+NALRIP+SL LAL+P  +      V+  G      L+WDVL+ LF +AA  GMLI+LDMH L   +     LWY+  ++EADF +GW  +L RF  KP L AIDL NEP G A+WG G   TDW LAA RI+  +    PD++ L FVEG+      P+ Y  P+  F+ + G NLDG+   PI     AL K LVY+PHVYGPDV   Q +F    FP NM  IWD Q+GF+++ T G A VIGEWGG+  G+D       + Y+V +C +DNF+W++NP
Sbjct:  206 GLVLGTMRALGVNALRIPVSLDLALAPLTRVQVADCVECAGA-----LAWDVLDLLFDKAAAYGMLIMLDMHRLN--RLAQTGLWYDALHTEADFKQGWVNLLTRFGQKPNLFAIDLKNEPSGLATWGQGVIATDWNLAAQRIVAEITTQLPDFNRLIFVEGVATTDKCPTQYPFPDPSFNKFLGQNLDGVATVPIDFGDPALNKLLVYSPHVYGPDVL-IQPYFKDPTFPANMAQIWDKQMGFLKQAT-GNAVVIGEWGGTLAGKDLQWAVAFTDYMVANCFNDNFYWSINP 489          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: H6WB93_VAULI (Putative endogluconase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB93_VAULI)

HSP 1 Score: 240 bits (613), Expect = 1.350e-67
Identity = 130/303 (42.90%), Postives = 182/303 (60.07%), Query Frame = 3
Query:  897 HNLYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSV-YTKPNQF-DHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNP 1796
            H L+G    ++  VLD L     N LRIP+SL LAL    + +    V+       S LSWD + RL  +AA RG+L++ D H L   ++   ELWY+D Y E  FI+GW  ++ +F S P  M IDLFNEPH +A+WG G + TDW   A RI+  + +  P Y+ L FVEGI     S  Y + +   D +WG N  GLYD  +   +  L K LVY+PH+YGPD+Y+   +F +S FP+NMP IW+ Q+GFIE +T G+A +IGEWGG   G+D +LQ     Y+++ C+S +F+W+V P
Sbjct:   76 HGLWG--DVTMDEVLDFLAANDFNGLRIPLSLSLALDNQTKISQYQCVECT-----SDLSWDAIERLMDKAAERGLLVLFDFHKLADGES--TELWYSDNYPEEKFIEGWVNIIEKFGSWPNFMGIDLFNEPHISATWGKGLE-TDWNKGAERIVQGIVEQIPTYNKLIFVEGISSGGSSTPYDEDDPANDQFWGSNFFGLYDAEVDFGTPELNKLLVYSPHIYGPDLYDHD-YFNASDFPDNMPEIWEKQIGFIESLT-GKAVIIGEWGGKMEGKDAILQEKWVQYMLDACISGSFYWSVTP 366          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A4D9DB90_9STRA (Cellulase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB90_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.950e-67
Identity = 122/288 (42.36%), Postives = 174/288 (60.42%), Query Frame = 3
Query:  936 VLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSVYTKPNQFDHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNP 1796
            +   L+    NA+R+P S  LAL P ++ N       +          +++  +  +AA  G+LI+LDMH L   ++   ELWY+DKYS  D  + W+ +L  F  +  L AIDL NEPHG A+WG G+ KTDW  AA  +   ++K HP Y GL FVEG    A + + K ++ + WWGG+L+G+ + PI+L S AL KKLVY+PHVYGPD +  Q +F +  FP+NMP IW  Q  F+E  T  RA V+GEWGG Y  QD++ Q+  + +LV+ C+ D F+W +NP
Sbjct:   82 IFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKELHDLT----VLELIGNIIDKAAEYGILIMLDMHRLN--EDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKAKTDWNTAAEELATYLYKKHPQYKGLVFVEGT-QLASAKHHKLDKNNKWWGGDLEGVQEFPIELGSDALNKKLVYSPHVYGPDAF-VQPYFEAKNFPDNMPDIWKKQWAFVEEQT-DRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNP 360          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835YY53_9STRA (Putative endogluconase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY53_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.910e-62
Identity = 132/319 (41.38%), Postives = 180/319 (56.43%), Query Frame = 3
Query:  882 TDTYKHNLYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSP------WQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRK----KTDWGLAATRIINAVHKAHPDYSGLFFVEGIWHNAPSV-YTKPNQ-FDHWWGGNLDGLYDHPIKLSGALVK-KLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGG--SYTGQDEVLQNWLSGYLVNHCMSDNFFWAVN 1793
            T +  H L+GL   ++  V+D L     NALRIP SL LAL P      WQ    C       + P S  +W  L+RLF +AA +G++IVLD+H L     I  +LWY+DKY E   I GW+ ++RR+ S+  LM IDL NEPHG A+W L       K DWG AA RI  A+ K +P +  L  VEG+  +   + Y + +  +  +WG NLDGLY   +    A    ++VY+ H+YGP V   Q +  +  FP NMPAIWD Q+GF+E +T G+  VIGEWGG       D+ LQ   + Y+ + C+ DNF WA+N
Sbjct:   62 TASVVHGLWGLT--TMDKVMDFLVANKFNALRIPFSLALALDPNFMIDPWQ----CMECTPDPSKPTS--AWGALDRLFDKAAAKGLMIVLDLHVLGKGGGIM-DLWYDDKYDETSVITGWSNMVRRWGSRANLMGIDLKNEPHGVATWALSTDSAPDKHDWGQAAERIAKALIKQYPSFDKLVIVEGVGADGADLPYPRSDPAYSKYWGSNLDGLYKRQLNFGSAQANARMVYSSHIYGPSV-SMQPYDSAPNFPNNMPAIWDKQVGFVEGLT-GKPVVIGEWGGLKKNVDLDQKLQAKWAQYMADKCIGDNFIWAIN 369          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A835YZH6_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH6_9STRA)

HSP 1 Score: 223 bits (569), Expect = 5.990e-61
Identity = 132/331 (39.88%), Postives = 188/331 (56.80%), Query Frame = 3
Query:  897 HNLYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSG---LSWDVLNRLFGEAALRGMLIVLDMHNLE-PEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGI-WHNAPSVYTKPN-QFDHWWGGNLDGLYDHPIKLSGALV---KKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNWLSGYLVNHCMSDNFFWAVNPERSVRIQSEKKV--HACRKRLP 1856
            H L+G D  ++   LD L+    NALR+P+SL   L      N     D     P +     +  +L++LF E A RG+L++LDMH L  P  ++   +   ++ S A F +  N +L  + ++P L+ IDL NEPHG ASWG+G++ TDW  AA RI+  +   HP Y+ L F+EGI    A S +      +D  WG NLDG Y +P+  +G L     K+VY+PHVYGP V+  Q ++    FP+NM AIWD Q+G +E  T G+A V+GEWGG Y G D VLQ+ L  YL + C++D F+WA N +  VR  +   +  H CR  +P
Sbjct:  113 HGLWG-DGTTMKQALDFLQANKFNALRVPVSLDTVL------NAAAKPDAQSCLPANCGALTTAQLLSQLFKECAARGILVLLDMHYLNTPPADLTLPI---EEPSPAPFPR--NTLLDLYGAEPNLLGIDLKNEPHGTASWGIGQRSTDWAAAAVRIVQGIRAKHPGYNKLIFIEGISTGRASSPFPAARASYDMNWGMNLDGAYANPVVFTGRLAYLNDKVVYSPHVYGPSVFN-QTYYADPTFPKNMAAIWDQQIGGLEAAT-GKAVVVGEWGGLYIGTDRVLQDALGAYLKSKCIADAFWWANNHQCLVRAAAAAAIRPHDCRSPMP 429          
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Match: A0A4D9CVE0_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVE0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.860e-61
Identity = 126/305 (41.31%), Postives = 174/305 (57.05%), Query Frame = 3
Query:  903 LYGLDKQSIGNVLDVLKMRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFGEAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKSKPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLFFVEGI----WHNAPSVYTKPNQFDHWWGGNLDGLYDHPIKL-SGALVKKLVYAPHVYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGSYTGQDEVLQNW--LSGYLVNHCMSDNFFWAVNP 1796
            L GL   S    +  L     NALR+P SL+             YV  V           V++R+F  AA +G+LI+LD+H +  E+ I  +LWY++    A  +  W  +LRRF  +  L+ IDL NEPHG ASWG G  KTDW   AT+ I  +    PD+ G+FFVEG+    W N+P  Y        WWGGNL+G+  +PI   S  L +++VY+PH+YGP+V+    +F  S+FP+NMP IWD Q G+IE+ TY RA V+GEWGGS  G  +   N   L+ +LV+ C+ DNF+W +NP
Sbjct:  144 LDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANIYV--VQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGIT-DLWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLAARVPDFQGVFFVEGVERPRW-NSPHAY--------WWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTY-RAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNP 435          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1892.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUK9_9STRA7.860e-7742.94Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZC46_9STRA8.820e-7746.45Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YRP3_9STRA5.520e-7244.85Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A4D9CU83_9STRA3.880e-6940.33Cellulase domain-containing protein n=2 Tax=Monodo... [more]
A0A835YQS7_9STRA4.150e-6846.42Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
H6WB93_VAULI1.350e-6742.90Putative endogluconase n=1 Tax=Vaucheria litorea T... [more]
A0A4D9DB90_9STRA1.950e-6742.36Cellulase domain-containing protein n=3 Tax=Monodo... [more]
A0A835YY53_9STRA4.910e-6241.38Putative endogluconase n=1 Tax=Tribonema minus Tax... [more]
A0A835YZH6_9STRA5.990e-6139.88Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A4D9CVE0_9STRA6.860e-6141.31Cellulase domain-containing protein n=2 Tax=Monodo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1892contigP-wetherbeei_contig1892:2..3210 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1500893.JQNB01000001_gene2608
Preferred nameengXCA
PFAMsCBM_2,Cellulase
Model size2123
Max annot lvl135614|Xanthomonadales
KEGG koko:K01179
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.48e-51
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,1RCG4@1224|Proteobacteria,1SYV8@1236|Gammaproteobacteria,1XCSY@135614|Xanthomonadales
EC3.2.1.4
DescriptionCBD_II
Cds size984
COG categoryG
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1892.1.3prot_P-wetherbeei_contig1892.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1892 955..3024 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186158.9499042-UTR-P-wetherbeei_contig1892:1..9541683186158.9499042-UTR-P-wetherbeei_contig1892:1..954Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1892 2..954 +
1683186159.008767-UTR-P-wetherbeei_contig1892:3024..32101683186159.008767-UTR-P-wetherbeei_contig1892:3024..3210Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1892 3025..3210 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186158.9591153-CDS-P-wetherbeei_contig1892:954..11361683186158.9591153-CDS-P-wetherbeei_contig1892:954..1136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1892 955..1136 +
1683186158.9668791-CDS-P-wetherbeei_contig1892:1422..15601683186158.9668791-CDS-P-wetherbeei_contig1892:1422..1560Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1892 1423..1560 +
1683186158.9748108-CDS-P-wetherbeei_contig1892:1822..21021683186158.9748108-CDS-P-wetherbeei_contig1892:1822..2102Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1892 1823..2102 +
1683186158.9821007-CDS-P-wetherbeei_contig1892:2370..24001683186158.9821007-CDS-P-wetherbeei_contig1892:2370..2400Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1892 2371..2400 +
1683186158.9895265-CDS-P-wetherbeei_contig1892:2670..30241683186158.9895265-CDS-P-wetherbeei_contig1892:2670..3024Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1892 2671..3024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1892.1.3

>prot_P-wetherbeei_contig1892.1.3 ID=prot_P-wetherbeei_contig1892.1.3|Name=mRNA_P-wetherbeei_contig1892.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp
MRGINALRIPISLQLALSPWQQANGCGYVDGVGTCPDSGLSWDVLNRLFG
EAALRGMLIVLDMHNLEPEQNIANELWYNDKYSEADFIKGWNAVLRRFKS
KPALMAIDLFNEPHGAASWGLGRKKTDWGLAATRIINAVHKAHPDYSGLF
FVEGIWHNAPSVYTKPNQFDHWWGGNLDGLYDHPIKLSGALVKKLVYAPH
VYGPDVYEFQGFFLSSKFPENMPAIWDVQLGFIERVTYGRAAVIGEWGGS
YTGQDEVLQNWLSGYLVNHCMSDNFFWAVNPERSVRIQSEKKVHACRKRL
PVFLELQRLQGQPDPLYRSCIGTPPPV*
back to top

mRNA from alignment at P-wetherbeei_contig1892:2..3210+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1892.1.3 ID=mRNA_P-wetherbeei_contig1892.1.3|Name=mRNA_P-wetherbeei_contig1892.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3209bp|location=Sequence derived from alignment at P-wetherbeei_contig1892:2..3210+ (Phaeothamnion wetherbeei SAG_119_79)
ACCGCTCGCGCCGCGCCCGACGCGGAGCACGAGCCCTGGAACTTTGAAGG ACACAACCAGACAGCGGACGGGCTGACCTCTTTGCACCGCGGCCTCGCGG CGAAGACGATCAAGCTGCCGGGCCGGATCTATGCTCGCAACTACTTGGCC TACGTCGACACGCCGGGCACTTATCCGGGCCCGTATGTGCCCGGTGGCAT CGGCTACATCCTGCGCGGCGAGGCCGTCACGTATCGGGTCTCCGTCGACA AGGCGCACGTCTTCTCCGTCAAGTACTCACTCGCCGCGAAGACGGCCGCC AACCCGTACGTCTTCCTCGTCGCGGGCACCAGCTGCTATAACCGCCGGCT TGCGCCAACCACCGGCGGCAAGGTCAACACGGGCTCATGGAAGAAGTACG ATGATTACGCGGCCGACGGCAACATTTACCTGAGCAAGGGCACCCACACG CTGACGGTGTGCTTCGCCAACGACGGCTACAACTTTGGCGGGCTGCGCCT CACCAGGTCCGACGGACCCGGGCCGGGCCCGGCGGCGGTCAAGACATACC CGAAGGCGGACGGTGGCGGCTGTTACAAGCGGGCCGTGTGGGAGTCCGTT GATGGCGAGGTCCGTCTCAACGGCAAGGCTTTCCACATCAAGGGCGCCAA CTGGTTCGGCTTCGGTGAGTTTAATCTAGACCGCTTCGCTCCATTCAGAG CAGCTTTTGATCGACGGAAGGAATAAGAGGCAAGAAAAGCGCAGTTTTAT ATCAGGCGGCCGTTGCCTCTTGGGCTGATCTCTCGCCGCCCTTCTCTTGC CTCGCTGCCTTCAATGCCGCGCTCGCCACGTTGCCGCTCTTTTTCACTTC CCTTGGCGCGCTCCGTCTGTACCGCAAATAAACAGACACGTACAAGCACA ACCTGTACGGCCTCGACAAGCAGTCCATCGGCAACGTTCTGGATGTCCTC AAGATGCGCGGCATTAATGCCCTCCGCATCCCCATCTCGCTGCAGCTCGC CCTGAGCCCGTGGCAGCAGGCCAACGGCTGCGGCTACGTCGACGGCGTCG GCACGTGCCCCGACTCGGGCCTCTCCTGGGACGTGCTCAACCGGCTCTTT GGCGAGGCGGCGCTGCGTGGCATGCTTATCGTCCTGTGAGTCATCATTCT TTCTTGCTTTTGCTTTATTCTTGATCTTGGCGTCGCCTTCTGCTGAGACT AATGGATGTCGGTGGTTTAACATTACGCGTTCGAGGGCCGTCGAGTTGTC GGGCCGGGCCGTCTTCTGGCCGATTCCTGGGCAAGACGGTGCTTTTTGCG ATTAATTGGCACGGTTTTACTCCTACAAGCGCTCTCACTTTGCGAACCGC TGCGTATGCTACGCGTCCTCACCGCCGCTGTATTTCCGCTGCCAACTCCA AATTTCTTTTTTGGGCCACAGGGACATGCACAACCTCGAGCCGGAGCAAA ACATCGCGAACGAGCTATGGTACAACGACAAATACAGCGAGGCCGACTTC ATCAAGGGGTGGAACGCCGTCCTCCGCCGCTTCAAGAGCAAGCCCGCCCT CATGGCCATGTGAATTCGTTTTTTTCTTTTGCGGCTGGTGGCGGCGGCAG TGCAACGTTTCGGGCGCCCGTTCTTTGTGGAGTTGGGCAGGGGGCGAGAA TCTGCAGAGCTCCCTCGTCTGCTCGGTGAAGTCTGATATTCTTCGACTCC ACGCCAGAGCTCGTGTTTGCTTTGCCGTCGCCCGGTTGTTTCTGACGACA TCTGGCTGCCGCTTCCGGTTCCTCCTCTTCTTCTGCTTCTCTCCTTTTAA TTGGCCGACATGATTAAACAGCGACTTGTTCAACGAGCCGCATGGCGCCG CATCGTGGGGCCTTGGCCGCAAGAAGACGGACTGGGGCCTGGCCGCCACT CGCATCATCAACGCCGTCCACAAGGCGCACCCAGACTACTCCGGGCTCTT TTTCGTGGAGGGCATCTGGCACAACGCTCCTAGCGTCTACACCAAGCCCA ACCAATTTGACCACTGGTGGGGCGGCAACCTCGACGGCCTTTACGACCAC CCCATCAAGCTGTCCGGAGCGCTCGTGAAGAAGCTCGTCTACGCGCCCCA CGTGAGTCGCCACCGCTTCCGCCGCTGTGGCAGCTGCCGCCGCTGACGCT GTTCAGTTAAGGGTGGGAAAAATGATGGTTTGAAAGTGGAAGTAAGGCAG TTCGTTGGACCCGCGTAGGACATCTTTCAGGACGCCGCTGTGACAAACAC CAGCCCCTTCGCGCCAAAACCAGGCTAGAGATCCTAATCTCCCTCCCTTT TCTGTCGCCTGCCTCCTTATCCCCGTTTTTGCTGCCTTCTCCTTTCGACA ACCCTGCATAATTTCTTAGGTGTATGGCCCTGATGTATATGAGTTCCAGG TGAGCTGCTCGTTGCAATGGCGGGATTGGATTCTGGAGGCTTCTTTGGGC TGTCAGCGTTGCCGCTAAAGTTTTTTGCGCCGGAGTTGACCAGACCTTCC TCTGCAAATTTTGGACTTGCTTCCGACTCCACCACCCCATATTGAAGTGT CGCTACAGTGCACGTCCCTTTGGCTGAAAGAACGCTTGGTCTAACGCTCG CATGCCCTTCTTTTGTCCCCGTCCTCCCGGCTTCGACTCGACCCGTTCGC CGCCGCTCAATTCCATCAGGGCTTCTTCCTGTCTTCGAAGTTCCCAGAGA ACATGCCGGCCATATGGGACGTGCAGCTCGGATTCATCGAGCGCGTTACC TACGGCCGGGCCGCCGTCATTGGCGAGTGGGGCGGATCCTACACCGGCCA GGATGAGGTGCTCCAGAACTGGCTCTCGGGGTATCTCGTAAACCATTGCA TGTCGGACAACTTTTTCTGGGCCGTCAATCCCGAAAGGTCAGTGAGGATC CAATCAGAAAAGAAGGTGCACGCATGCCGGAAGAGGTTGCCCGTGTTTCT CGAGCTGCAGCGGCTGCAAGGGCAGCCAGATCCACTTTACCGTTCATGCA TTGGGACGCCTCCGCCGGTTTAGGTGAACTGCATGCCCGCAATCCCGCTT GCATCATGTCGACCTTTCCTCACCTTTTCTCCATCCGGCTCCGTTTTCTT CCCGCCCCACTCGCATCCTGTAGCTCTGATACCGGCGGATTGCTGTACGA TGACATGCAGAGCGTTAATACGGACAAGTTTTCGCTGCTTCGGAAGCTCC AGCCGAACC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1892:2..3210+

>mRNA_P-wetherbeei_contig1892.1.3 ID=mRNA_P-wetherbeei_contig1892.1.3|Name=mRNA_P-wetherbeei_contig1892.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig1892:2..3210+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGGCATTAATGCCCTCCGCATCCCCATCTCGCTGCAGCTCGCCCT
GAGCCCGTGGCAGCAGGCCAACGGCTGCGGCTACGTCGACGGCGTCGGCA
CGTGCCCCGACTCGGGCCTCTCCTGGGACGTGCTCAACCGGCTCTTTGGC
GAGGCGGCGCTGCGTGGCATGCTTATCGTCCTGGACATGCACAACCTCGA
GCCGGAGCAAAACATCGCGAACGAGCTATGGTACAACGACAAATACAGCG
AGGCCGACTTCATCAAGGGGTGGAACGCCGTCCTCCGCCGCTTCAAGAGC
AAGCCCGCCCTCATGGCCATCGACTTGTTCAACGAGCCGCATGGCGCCGC
ATCGTGGGGCCTTGGCCGCAAGAAGACGGACTGGGGCCTGGCCGCCACTC
GCATCATCAACGCCGTCCACAAGGCGCACCCAGACTACTCCGGGCTCTTT
TTCGTGGAGGGCATCTGGCACAACGCTCCTAGCGTCTACACCAAGCCCAA
CCAATTTGACCACTGGTGGGGCGGCAACCTCGACGGCCTTTACGACCACC
CCATCAAGCTGTCCGGAGCGCTCGTGAAGAAGCTCGTCTACGCGCCCCAC
GTGTATGGCCCTGATGTATATGAGTTCCAGGGCTTCTTCCTGTCTTCGAA
GTTCCCAGAGAACATGCCGGCCATATGGGACGTGCAGCTCGGATTCATCG
AGCGCGTTACCTACGGCCGGGCCGCCGTCATTGGCGAGTGGGGCGGATCC
TACACCGGCCAGGATGAGGTGCTCCAGAACTGGCTCTCGGGGTATCTCGT
AAACCATTGCATGTCGGACAACTTTTTCTGGGCCGTCAATCCCGAAAGGT
CAGTGAGGATCCAATCAGAAAAGAAGGTGCACGCATGCCGGAAGAGGTTG
CCCGTGTTTCTCGAGCTGCAGCGGCTGCAAGGGCAGCCAGATCCACTTTA
CCGTTCATGCATTGGGACGCCTCCGCCGGTTTAG
back to top