mRNA_P-wetherbeei_contig18895.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A7C3JPV1_9PROT (CPBP family intramembrane metalloprotease n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JPV1_9PROT) HSP 1 Score: 211 bits (536), Expect = 2.760e-65 Identity = 108/171 (63.16%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDRPGAKKAIE 510
H+L+P RY L+F+A RFFPF+ VLLLTP QAA EEL+FRGY+MQGLG+LTRR A+IA+ SSL+F A HL NPE +++G +MAA YF+ G++ ATIALRDGRLELAIGLHA+NN+F AL+AN EGS L T SIFT+ LDPV+SLV L + FH W+F R GA+ E
Sbjct: 116 HVLFPERYYLSFNAERFFPFLALVLLLTPFQAAAEELVFRGYLMQGLGLLTRRPALIAVASSLIFTAPHLMNPEAQQHGALIMAANYFVIGMLLATIALRDGRLELAIGLHAVNNVFLALVANYEGSALMTESIFTARELDPVYSLVTLALGALVFHRWVFTR-GARTRQE 285
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A0S8C8U6_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C8U6_9PROT) HSP 1 Score: 192 bits (488), Expect = 3.670e-58 Identity = 101/163 (61.96%), Postives = 125/163 (76.69%), Query Frame = 1
Query: 4 LLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDRP 489
LL+ R+ L+FDAARF PF++ VLLLTP+QAATEEL+FRGY MQ G LTR A+IAI+SS++F A HL NPEV +G+ +MAA YF G++ ATI LRDGRLELA+GLHA NN+F AL+ N EGS L T SIFT+ LDP +SL+ LV + FHWW+F RP
Sbjct: 117 LLFRDRFYLSFDAARFAPFLLLVLLLTPLQAATEELVFRGYAMQAFGRLTRDPAMIAILSSVVFTAPHLLNPEVHEHGVLLMAANYFAIGMLLATITLRDGRLELAVGLHAANNVFLALLVNYEGSALMTESIFTARELDPYYSLMALVGGALVFHWWVF-RP 278
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A1F4CY07_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CY07_9PROT) HSP 1 Score: 187 bits (476), Expect = 3.060e-56 Identity = 96/173 (55.49%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDR--PGAKKAIE 510
HLLYP RY L+FD RFF F VL+LTPVQ TEEL+FRGY MQGLG++ R +IA++S+ +F HL NPEV+++G +MA +YF GL+ A + LRDGRLELAIG+HA+NN+ ALI N EGSVL T S+FT+ LDP +SLV LV ++ F+ W F R P AK+ +
Sbjct: 116 HLLYPDRYYLSFDPERFFTFAALVLVLTPVQTTTEELVFRGYAMQGLGLVIRPPVLIAVLSAAIFTVPHLMNPEVQQHGALLMAGSYFAIGLLLAAVTLRDGRLELAIGIHAVNNLLLALITNYEGSVLTTESVFTARELDPEYSLVSLVAASLLFYGWFFRRRHPPAKRGAD 288
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A1F4DJN0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DJN0_9PROT) HSP 1 Score: 187 bits (474), Expect = 3.890e-56 Identity = 89/163 (54.60%), Postives = 123/163 (75.46%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDR 486
HLLY RY L+F+ RFF F L+LTP+Q TEEL+FRGY+MQGLG++ RR A++A++S ++F HL NPEV ++G+ +MAA+YF GL+ A + LRDGRLELAIG+HA NN+ L+AN EGSVL+T SIFT+ LDP+++L+ L+ + F+WW+F R
Sbjct: 116 HLLYADRYYLSFNPDRFFMFAALALVLTPLQTTTEELVFRGYVMQGLGIVIRRPALVAVLSGVVFTVPHLLNPEVRQHGVVLMAASYFAIGLLLAAVTLRDGRLELAIGVHAANNLLLVLVANYEGSVLRTDSIFTARELDPLYTLITLILGALVFYWWIFRR 278
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A1F3ZY60_9PROT (Uncharacterized protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1F3ZY60_9PROT) HSP 1 Score: 178 bits (452), Expect = 1.610e-52 Identity = 88/163 (53.99%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDR 486
HLLYP RY L+F A RF PF LLLTP+Q ATEEL+FRGY+MQG+ ++ +R A +A+ S+++F HL NPEV+++G+ +M A+YF+ GL+ A + LRDGRLELAIGLHA NN+ L+AN EGSVL + SIFT+ LDP ++L L + F+ W F R
Sbjct: 138 HLLYPERYLLSFMAERFVPFAAVALLLTPLQTATEELVFRGYVMQGMALVVKRPAAVAVASAIIFTLPHLLNPEVQQHGVVLMGASYFVIGLLLAAVVLRDGRLELAIGLHAANNLLLVLVANYEGSVLASESIFTARELDPAYALATLSIGALLFYAWFFCR 300
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A3N5XFU3_9PROT (CPBP family intramembrane metalloprotease n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5XFU3_9PROT) HSP 1 Score: 169 bits (427), Expect = 1.100e-46 Identity = 88/163 (53.99%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDR 486
+L+YPGRY + D R+ PF+VA LLLTP+Q A EE++FRGY++Q LG R A +A++SS F HL+NPEV YG+A+MAA YF GL A+ ALRDGRLELAIG HA NN+ AL + SV +T S+FT+ LDPV+SLV L+ + + FH W+F R
Sbjct: 116 NLIYPGRYVWSLDWQRWLPFVVAALLLTPLQCAAEEMVFRGYLVQALGRRLRHPAALAVLSSAAFTLPHLYNPEVAVYGVAIMAANYFGMGLFLASAALRDGRLELAIGAHAGNNLLLALFIHYADSVFETESVFTAGALDPVYSLVTLILSALLFHIWVFRR 278
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A7C2UFZ1_9PROT (CPBP family intramembrane metalloprotease n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UFZ1_9PROT) HSP 1 Score: 161 bits (407), Expect = 6.390e-46 Identity = 89/163 (54.60%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 1 HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMFDR 486
HLLYP RY L+FD FF F L+LTP+Q TEEL+FRGY MQ L ++ RR IA+VS+ +F HL NPEV R GLAV AA+Y+ GL+ A I LRDGRL+LAIG HA NN+ ALIAN EGS L SIFT+ LDP ++ V +V ++ F+ F R
Sbjct: 125 HLLYPERYYLSFDPGPFFVFAAVALVLTPIQTTTEELIFRGYAMQALSLVMRRPLAIAVVSAFIFTLPHLMNPEVHRAGLAV-AASYYAIGLLLAVITLRDGRLDLAIGAHAANNLGLALIANYEGSALTGESIFTARELDPGYTFVSIVAGSVLFYALFFGR 286
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A315B0S3_9BURK (Uncharacterized protein n=2 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A315B0S3_9BURK) HSP 1 Score: 142 bits (359), Expect = 8.280e-39 Identity = 77/161 (47.83%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 7 LYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTSPL-DPVFSLVGLVFTTIAFHWWMFDR 486
LYPGRY + + +F F++ LLLTP+Q A EEL FRGY +Q +G + R V A++SSLLF A HL+NPE +GL ++A YF G + A + LRD LELAIGLH NN F + + S L S+IFTS DPVFSL +V + F+ W F R
Sbjct: 124 LYPGRYVWSLEFQSWFFFLLLALLLTPLQCAAEELFFRGYFLQAMGRIFRHPFVPAVLSSLLFTAPHLFNPEAAAHGLGILAVTYFTMGFLLALLVLRDAGLELAIGLHTANNFFLVMCFGYKDSPLPASAIFTSATYDPVFSLASVVVGGLIFYAWFFRR 284
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A656HM65_THINJ (Abortive infection protein n=1 Tax=Thiothrix nivea (strain ATCC 35100 / DSM 5205 / JP2) TaxID=870187 RepID=A0A656HM65_THINJ) HSP 1 Score: 142 bits (358), Expect = 1.420e-38 Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 4 LLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEVERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFTS-PLDPVFSLVGLVFTTIAFHWWMF 480
L PG Y ++FDA +F F+ L++TP+QAA EELLFRGY+MQG+G+LTR AV + SSLLF A HL NPE+ + ++ YF+ L A I ++ LELAIG+HA NN+F L+ N E S L SIFT+ +DP+ SLV V AF+W +F
Sbjct: 132 LFKPGEYAVSFDARQFLLFLPVALVVTPLQAAAEELLFRGYLMQGMGLLTRSKAVPVLGSSLLFMAAHLTNPEMVE-DVYLVPVLYFLLALFLAVITIKSNSLELAIGVHAANNLFAVLVMNYENSALPAPSIFTANAIDPLASLVSFVVVASAFYWIVF 290
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Match: A0A1H4CPV0_9GAMM (Uncharacterized protein n=1 Tax=Thiothrix caldifontis TaxID=525918 RepID=A0A1H4CPV0_9GAMM) HSP 1 Score: 140 bits (353), Expect = 9.330e-38 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 4 LLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLTRRVAVIAIVSSLLFGAVHLWNPEV--ERYGLAVMAAAYFMSGLMFATIALRDGRLELAIGLHAINNIFTALIANNEGSVLQTSSIFT-SPLDPVFSLVGLVFTTIAFHWWMFDRPGAKKA 504
L +P Y++TFDA +F F+ L +TP+QAA EE LFRGY MQGLG+L+RR + + SSLLF A HL NPE+ ++Y + ++ Y + GL A I ++ LELAIG+HA NN+FT LI N S L + ++FT S +DP+ SL+ V F+W MF R A
Sbjct: 132 LWHPHTYQVTFDAKQFLIFLPIALFVTPLQAAAEEFLFRGYFMQGLGLLSRRAIIPVVGSSLLFMAAHLANPEMGEDKYLIPLL---YLLMGLFLAIITVKSNSLELAIGVHAANNLFTVLIMNYANSALPSPALFTASQVDPLISLISFVVVAALFYWIMFRRWNVNHA 298 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18895.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18895.1.1 >prot_P-wetherbeei_contig18895.1.1 ID=prot_P-wetherbeei_contig18895.1.1|Name=mRNA_P-wetherbeei_contig18895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp HLLYPGRYRLTFDAARFFPFMVAVLLLTPVQAATEELLFRGYIMQGLGVLback to top mRNA from alignment at P-wetherbeei_contig18895:2..520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18895.1.1 ID=mRNA_P-wetherbeei_contig18895.1.1|Name=mRNA_P-wetherbeei_contig18895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig18895:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18895:2..520+ >mRNA_P-wetherbeei_contig18895.1.1 ID=mRNA_P-wetherbeei_contig18895.1.1|Name=mRNA_P-wetherbeei_contig18895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig18895:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top |