mRNA_P-wetherbeei_contig18875.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18875.1.1
Unique NamemRNA_P-wetherbeei_contig18875.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A6H5KSX3_9PHAE (ATP-grasp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSX3_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 5.310e-67
Identity = 145/329 (44.07%), Postives = 181/329 (55.02%), Query Frame = 1
Query:    7 AHSAGELEE--LPTGAVLIVDPMCSYLGGYVSRRAQERGFASVQVLSDHLLSHLDAGNDLEPFGAPPPGGEAAWAAALPFPVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSL---------------------------VPADAD-DAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSS 903
            A +  E EE   P   V++VDP C YLG       +E G+A   VLSDHL++ L++ +  + F  P PG EA WA+ LPFP+V V+CESDAGL  AERL++ LL    G G++ ARRDKFLM EA+R AGLAA RQ+KTG   +   FL +L                           V AD D D AA                                   V +VVKP RGCASG VF C+G  +A   F  + GT KYG+PGE ND+ L+QE+L GTEYVVDT+SR G+HKA      +A+WRYDKRP NGAPFVY+  +L  S
Sbjct:  111 AETGSEAEEGGAPVAGVIVVDPFCDYLGKRCIDILEEAGYAV--VLSDHLVATLNS-DSAKGFRPPSPGKEAEWASWLPFPIVAVVCESDAGLANAERLQAALLGPRFG-GINDARRDKFLMNEAMRTAGLAAARQIKTGDRAKVRQFLATLETTTTASPPTPARQQPSQQLEQTGGREVAADTDGDLAAPTPEENSGNVLAEAKGLGSRGEEQEEDGGDGNSPGVLSVVKPARGCASGSVFRCQGEHEAMEAFDKIFGTPKYGTPGEFNDEVLVQEFLVGTEYVVDTVSRDGEHKA------VAIWRYDKRPANGAPFVYFSVKLMPS 429          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: W7TSP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.340e-44
Identity = 138/298 (46.31%), Postives = 174/298 (58.39%), Query Frame = 1
Query:   46 AVLIVDPMCSYLGGYVSRRAQERGFASVQVLSDHLLSHLDAGNDLEPFGAPPPGGEAAWAAALPF--PVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRS-LVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVR-------AVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSSGA 909
            A +I+DP   +LG Y+ RRAQ  G   + VLS + ++ L  G     + AP PG E  WAA LP    V  VL ESD G  TAER+ + +  G  G GV+  RR+K+L   A++  G+   RQ+    WEEAE F+R+ L+P     + +       XXXXXXXXXXXXXXXXXXXXXXX              AVVKP RG ASGDV +C+ L   R  F  +  + KYG  G +N Q L+QEYL G E+ VDT+S  G HK      V AVWRYDKRP+NGAP VY+ T LR++ A
Sbjct:  219 AFVIIDPFSPFLGRYLKRRAQAMGLVCIDVLSPYTVASLQDGP--RKWRAPWPGAEKKWAAHLPAFKRVAFVLSESDHGAATAERMHAAV--GAPGNGVNPTRRNKYLTNRALQARGVGYTRQILAETWEEAEAFVRNQLLPTHPTSSISATPSFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSVPLAVVKPVRGAASGDVHVCQDLPSIRIAFQAIKDSPKYG--GGVNTQVLLQEYLLGEEFAVDTVSCNGSHK------VTAVWRYDKRPVNGAPCVYHATILRAAEA 504          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A662XDC8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDC8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.490e-34
Identity = 114/313 (36.42%), Postives = 149/313 (47.60%), Query Frame = 1
Query:   46 AVLIVDPMCSYLGGYVSRRAQERGFASVQVLSDHLLSHLDAGNDLEP-----FGAPP--PGGEAAWAAALPFPV------------VGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSSGAAPSGAM 927
            AV++VDP  +  G  +++R  +RG+A V + SD L    +  N L P     F A     GG A   AA+   +            VGV+  ++ G+  A++L         G   SAARR+KFLMGE VR AG+ A RQ+   +W +AE F+R  +     DA                                     +R +VKP     S DV LC  + D RR F  + G  K    G  N   L+QEYL GTEYVVDT+SRAG HK      V+AVW YDKR  NGAPFVYY   LR   AAP+G++
Sbjct:  135 AVVVVDPYST--GSTLAQRLLDRGYACVCLYSDTLEVMRERMNHLPPDLTARFSAVVFHDGGAADSDAAVQTTIASLDRAVAGVDLVGVVAGAETGVLLADQLSEHYGLTTNGMSGSAARRNKFLMGEKVRAAGIRAARQLLATKWSQAESFVRQELSLSGADA-------------------------------------LRVIVKPVESAGSDDVTLCRSMEDVRRAFGRIQG--KINGLGLENQATLLQEYLDGTEYVVDTVSRAGVHK------VVAVWEYDKRAANGAPFVYYGVLLR---AAPAGSL 397          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A7S4B789_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B789_CHRCT)

HSP 1 Score: 138 bits (348), Expect = 6.290e-34
Identity = 103/259 (39.77%), Postives = 126/259 (48.65%), Query Frame = 1
Query:  133 VLSDHLLSHLDAGNDLEPFGAPPPGGEAAWAAAL--PFPVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEI-NDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRS 900
            VL+D  + HL +        APP   E  WA      FPV+GVLC SDAGL TAERL+  +L      G+ +ARRDK  M EA+  AGL+   Q     WEEAE FL +L                                           A + AVVKP RG +S  V L   L+ AR     L+ T       E+    AL+QEYLRG E+VVDT+SRAG+HKA      +A+WRY+K P NGAPFVY   EL S
Sbjct:   77 VLNDEQIEHLASHT------APPENFETEWAQQNLEEFPVLGVLCGSDAGLATAERLQ-HVLTPSRSNGILSARRDKLQMNEALSAAGLSTAAQASISSWEEAEAFLTALP------------------------------------------APLHAVVKPRRGQSSLRVGLATSLSQARHMVNALLETPTSLDSSEVPRGSALLQEYLRGDEWVVDTVSRAGEHKA------VALWRYNKGPANGAPFVYAYDELMS 280          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A835ZA87_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA87_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.320e-33
Identity = 78/190 (41.05%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  364 MGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADA--DDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSSGAAPSGAM 927
            M EA+R AG+ AVRQ K   W +   F  +L  A    DD  A                                      V+KP RGCASGDVFLC    +AR     ++G+  Y +PG +N +AL+Q++L G EYVVDT+S  G HKA      MAVWRYDKRP NGAPFVY+ TELR++     GA+
Sbjct:    1 MNEALRSAGMRAVRQCKARSWPDVAAFSAALAAAAGARDDRWAPL------------------------------------VIKPLRGCASGDVFLCATEVEARNALDTIVGSPLYATPGAVNREALVQDFLEGVEYVVDTVSCKGAHKA------MAVWRYDKRPANGAPFVYHATELRAASGREEGAV 148          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A6G0XJJ4_9STRA (ATP-grasp domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJJ4_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.460e-32
Identity = 105/297 (35.35%), Postives = 136/297 (45.79%), Query Frame = 1
Query:   46 AVLIVDPMCSYLGGYVSRRAQERGFASVQVLSDHLLSHLD-------------AGNDLEPFGAPPPGGEAAWAAALPFPVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELR 897
            AV++VDP  S  G  +++ A ERGFA + V SD   +  D                   P  AP     AA  A L F + GVL  ++ G+   + L         G   SAARR+K++MGEA+R AGL AV+Q +   W++ E F+                                            A      VVKP     S DVFLC  +ADA R F  ++G  K    G +N   L+QEYL GTEYVVDT+SR G+HK      V+AVW YDKR +NGA FVY+   LR
Sbjct:    6 AVVVVDPFSS--GMCLAQMAMERGFACISVYSDIEENMADWLVKVPTSIRTQYTQELFHPADAPIAPLVAAIRA-LNFEITGVLAGAEPGVVLTDLLADAFNVRSNGAAGSAARRNKYVMGEAIRSAGLRAVKQSRATSWQQIEQFI--------------------------------------------AAHGSSVVVKPVDSAGSDDVFLCSSVADASRAFHAIVG--KTNHLGLVNTACLVQEYLGGTEYVVDTVSRDGQHK------VVAVWEYDKRAVNGAAFVYFGVWLR 247          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A7S4T2U0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T2U0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.480e-32
Identity = 102/290 (35.17%), Postives = 141/290 (48.62%), Query Frame = 1
Query:   46 AVLIVDPMCSYLGGYVSRRAQE-RGFASVQVLSDHLLSH--LDAGNDLEPFGA---PPPGGEAAWAAALP-FPVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTEL 894
            A++++D  C Y G +++ RA+   G   + VLSD++  +  L   +DLE   +   P    +  W  AL    +V ++CESD+GL  AERL   LL      GV  ARR+K+LM E V+ AGLA V+Q      EEA  F + L      D+                                    DV  VVKP RG  S DV LC  +   +  F  + G   +GSP E ++  L+QE+  G E+ +D +S+ G+HK      V AVW YDKRP NGA FVYY T+L
Sbjct:   74 ALILLDTFCPYHGMFLAHRAKRIYGITVIPVLSDYMKGYFMLRRPDDLERLLSMCMPSESEKDGWCEALKGHDLVAIVCESDSGLADAERL-GVLLNTTYQNGVDEARRNKYLMVERVKEAGLAVVKQRLCKTLEEACDFAKELGVDSGGDS------------------------------------DVCVVVKPIRGVGSEDVTLCNDINSVKSAFQQIHGATVFGSPREKHEVVLVQEFAIGQEFAIDVVSKNGEHK------VAAVWIYDKRPANGASFVYYATKL 320          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A7S4ECK8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECK8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.810e-32
Identity = 102/295 (34.58%), Postives = 142/295 (48.14%), Query Frame = 1
Query:   49 VLIVDPMCSYLGGYVSRRAQERGFASVQVLS----DHLLSHLDAGNDLE-----PFGAPPPGGEAAWAAALPFPVVGVLCESDAGLETAERLRSQLLCG-GGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSS 903
            V++VDP+ +  G  ++  A +RGF  V+VLS    D + S L  G  L       + A  P        +L   V+GVL   ++G+E  + L S L      G   S ARRDK  MGE VR AGL AVRQ     W+ A +F  +L   D + +A                                       V+KP +   +  V++ + L + +RRF++++GT      GE ND  L+QE+++GTEYVVD +S  G HK       +A+WRYDKRP NGA FVYYC EL  S
Sbjct:   91 VVVVDPLST--GATLAAMAADRGFLIVRVLSQAFPDEIASCLPDGLTLNWHASLEYDAENPSKTVEALRSLDAHVLGVLVGCESGVECHDALTSALRGHPSNGPERSLARRDKHPMGECVRNAGLRAVRQELCSNWDSARVFCEALGVNDTETSAW-------------------------------------CVLKPCKSAGTDGVYIAKSLEECQRRFSEILGTETVF--GESNDNVLVQEFMKGTEYVVDHVSVEGVHKC------VAIWRYDKRPCNGAQFVYYCMELYQS 338          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A4D9CY63_9STRA (ATP-grasp domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY63_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.320e-31
Identity = 103/305 (33.77%), Postives = 150/305 (49.18%), Query Frame = 1
Query:   46 AVLIVDPMCSYLGGYVSRRAQERGFASVQVLS----DHLLSHLDAG-NDLEPFGAPPPGG--EAAWAAALP---------FPVVGVLCESDAGLETAERLRSQLLCG--GGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRSSG 906
            A+++VDP+ S  G  +++ A++RG+A ++VLS    + +L+ L A   DL+   +    G  EA  A+            F +VG+ C  ++G+E A+ L ++   G    G  +S  RRDKFLMGE VR AGL A RQV+T  WE  E F   L  +  +   +                                  D + V+KP R   + +VF    L +ARR F  ++G A     GE ND+ L QE+L+G EYVVD +S+ G HK       +A+W YDK P NG+ FVY+   L  SG
Sbjct:   40 AIVVVDPLSS--GALLAQMARDRGYAVIRVLSTTFSEDVLALLPAACKDLQFAASIQHAGDVEATLASIRSLGGGPHNGIFEIVGLTCGCESGVELADALSARYGEGMKSNGEALSHHRRDKFLMGERVRGAGLRAARQVETAEWEGIEAFANELGGSGKERGESPGDK-----------------------------GDFQMVLKPVRSAGTENVFFVSSLREARRAFKAILGEANLF--GERNDKVLAQEFLQGQEYVVDCVSKGGIHKC------VAIWAYDKAPCNGSKFVYFGVNLFESG 305          
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Match: A0A024TCD4_9STRA (ATP-grasp domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCD4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.960e-31
Identity = 103/307 (33.55%), Postives = 139/307 (45.28%), Query Frame = 1
Query:   49 VLIVDPMCSYLGGYVSRRAQERGFASVQVLSD------HLLSHLDAGNDLEPFGAPPPGGEAAWAAAL------------------PFPVVGVLCESDAGLETAERLRSQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLRSLVPADADDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVADVRAVVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEYLRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELR 897
            V++VDP  S  G  +++ A ERGFA + V SD       LL HL            P     ++AAA+                   F +VGVL  ++ G+  A+ L         G   SAARR+K++MGE +R AGL A++Q +   W +AE FL    P+ + DA                                        ++KP     S DVFL   +A+A+  F  ++G  K       N   L+QEYL G+EYVVDT+SR G HK      V+AVW YDKRPINGA FVY+   LR
Sbjct:    4 VVVVDPFSS--GLCLAQLAMERGFACIAVFSDAEDNLQDLLGHL------------PLAVRRSFAAAIFREPTMTLDQLVSTVRSVGFEIVGVLAGAEPGVCLADALSEAFGVRTNGSAGSAARRNKYVMGETIRAAGLRAIKQCQALSWSDAERFLLKEFPSSSFDA----------------------------------------ILKPLESAGSDDVFLVHSMAEAKAAFDTIVG--KVNHLRLTNTSCLVQEYLAGSEYVVDTVSRDGNHK------VIAVWEYDKRPINGAAFVYFGVWLR 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18875.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSX3_9PHAE5.310e-6744.07ATP-grasp domain-containing protein n=2 Tax=Ectoca... [more]
W7TSP4_9STRA1.340e-4446.31Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A662XDC8_9STRA3.490e-3436.42Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S4B789_CHRCT6.290e-3439.77Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A835ZA87_9STRA5.320e-3341.05ATP-grasp domain-containing protein n=1 Tax=Tribon... [more]
A0A6G0XJJ4_9STRA1.460e-3235.35ATP-grasp domain-containing protein n=1 Tax=Aphano... [more]
A0A7S4T2U0_9STRA2.480e-3235.17Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4ECK8_9STRA3.810e-3234.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9CY63_9STRA1.320e-3133.77ATP-grasp domain-containing protein n=1 Tax=Nannoc... [more]
A0A024TCD4_9STRA1.960e-3133.55ATP-grasp domain-containing protein n=2 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18875contigP-wetherbeei_contig18875:1..1268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FY34
PFAMsATP-grasp_4
Model size927
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.03e-72
EggNOG OGsCOG0439@1|root,2S0EE@2759|Eukaryota
Ec32 ortholog descriptionATP-grasp fold, subdomain 2
Ec32 orthologEc-27_006940.1
DescriptionATP-grasp domain
Cds size927
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.443191-CDS-P-wetherbeei_contig18875:0..1051683186157.443191-CDS-P-wetherbeei_contig18875:0..105Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18875 1..105 -
1683186157.4565597-CDS-P-wetherbeei_contig18875:265..10131683186157.4565597-CDS-P-wetherbeei_contig18875:265..1013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18875 266..1013 -
1683186157.4678876-CDS-P-wetherbeei_contig18875:1194..12681683186157.4678876-CDS-P-wetherbeei_contig18875:1194..1268Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18875 1195..1268 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18875.1.1prot_P-wetherbeei_contig18875.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18875 1..1268 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18875.1.1

>prot_P-wetherbeei_contig18875.1.1 ID=prot_P-wetherbeei_contig18875.1.1|Name=mRNA_P-wetherbeei_contig18875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp
MHAHSAGELEELPTGAVLIVDPMCSYLGGYVSRRAQERGFASVQVLSDHL
LSHLDAGNDLEPFGAPPPGGEAAWAAALPFPVVGVLCESDAGLETAERLR
SQLLCGGGGRGVSAARRDKFLMGEAVRRAGLAAVRQVKTGRWEEAELFLR
SLVPADADDAAAGNGNGNDETGKSKPNAVAAAAAKNVGADADAAVADVRA
VVKPPRGCASGDVFLCEGLADARRRFTDLIGTAKYGSPGEINDQALIQEY
LRGTEYVVDTMSRAGKHKARKGMNVMAVWRYDKRPINGAPFVYYCTELRS
SGAAPSGAM
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mRNA from alignment at P-wetherbeei_contig18875:1..1268-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18875.1.1 ID=mRNA_P-wetherbeei_contig18875.1.1|Name=mRNA_P-wetherbeei_contig18875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1268bp|location=Sequence derived from alignment at P-wetherbeei_contig18875:1..1268- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGCGCACTCGGCTGGCGAGCTGGAAGAGCTGCCAACCGGCGCCGT CCTGATCGTAGATCCCATGTGCAGGTAAAGAGATTTCTGAGTAGCCTGTT CGTCAACTCTGGTCACACAGACGCGATATCATCATTTCCAGCCTCTATTT CATCCGCACTAGGCTCTATGTACAACTTGCCAAACAATAATGCGCCAAAA TTACTTCTCTTAAAATCTTTCTAACCGGGCGATCCGCCACGCTTCCCGGC CGCAGCTACCTCGGCGGCTACGTGTCGCGTAGGGCCCAGGAGCGCGGCTT CGCCTCCGTCCAGGTACTCTCCGACCACCTCCTCAGTCACCTCGACGCCG GCAACGACCTCGAACCGTTCGGTGCGCCGCCGCCCGGCGGGGAAGCGGCG TGGGCAGCGGCGCTGCCATTCCCCGTCGTCGGCGTCCTCTGCGAGAGCGA CGCAGGGCTGGAGACGGCGGAGCGACTGCGGTCGCAGCTCCTCTGCGGCG GCGGCGGGCGCGGCGTCAGCGCGGCGCGGCGCGATAAGTTTCTGATGGGG GAGGCGGTCCGGCGGGCCGGGCTGGCGGCGGTGCGCCAGGTCAAGACGGG CCGCTGGGAGGAGGCCGAATTGTTTTTGCGCTCGCTTGTCCCCGCTGACG CGGACGACGCCGCCGCTGGAAACGGAAACGGCAATGACGAGACCGGCAAA AGCAAACCCAATGCTGTCGCCGCCGCAGCTGCTAAAAATGTCGGAGCCGA CGCCGATGCAGCGGTCGCGGACGTCCGAGCGGTGGTCAAGCCGCCCCGTG GCTGCGCCAGTGGCGACGTGTTCCTCTGCGAGGGCCTGGCGGATGCGCGG CGGCGCTTCACGGACTTGATTGGGACCGCAAAGTACGGCAGCCCCGGCGA AATCAACGATCAAGCGTTGATCCAGGAGTACCTGCGCGGGACAGAGTACG TCGTGGACACTATGAGCCGTGCCGGGAAACACAAGGCGAGGAAGGGGATG AACGTAAAGGGTGGGGATGGGCGATAACTTTACTTCCCGGTTTCTTGCCT GTGGCCGATGTAGCGGGGTAGAAATGAGTTCGCTACTTTCTCCATTCTAA CTTTCCGTCGCTGTTTTCTTCCCCGTGAATCTGGTTTCTTTCGCACTTTC CACCGGGCGGCAGGTGATGGCGGTGTGGCGCTACGACAAGCGGCCCATCA ACGGCGCCCCCTTCGTCTACTACTGCACCGAGCTGCGCTCCTCCGGGGCT GCGCCGTCGGGCGCGATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18875:1..1268-

>mRNA_P-wetherbeei_contig18875.1.1 ID=mRNA_P-wetherbeei_contig18875.1.1|Name=mRNA_P-wetherbeei_contig18875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig18875:1..1268- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGCGCACTCGGCTGGCGAGCTGGAAGAGCTGCCAACCGGCGCCGT
CCTGATCGTAGATCCCATGTGCAGCTACCTCGGCGGCTACGTGTCGCGTA
GGGCCCAGGAGCGCGGCTTCGCCTCCGTCCAGGTACTCTCCGACCACCTC
CTCAGTCACCTCGACGCCGGCAACGACCTCGAACCGTTCGGTGCGCCGCC
GCCCGGCGGGGAAGCGGCGTGGGCAGCGGCGCTGCCATTCCCCGTCGTCG
GCGTCCTCTGCGAGAGCGACGCAGGGCTGGAGACGGCGGAGCGACTGCGG
TCGCAGCTCCTCTGCGGCGGCGGCGGGCGCGGCGTCAGCGCGGCGCGGCG
CGATAAGTTTCTGATGGGGGAGGCGGTCCGGCGGGCCGGGCTGGCGGCGG
TGCGCCAGGTCAAGACGGGCCGCTGGGAGGAGGCCGAATTGTTTTTGCGC
TCGCTTGTCCCCGCTGACGCGGACGACGCCGCCGCTGGAAACGGAAACGG
CAATGACGAGACCGGCAAAAGCAAACCCAATGCTGTCGCCGCCGCAGCTG
CTAAAAATGTCGGAGCCGACGCCGATGCAGCGGTCGCGGACGTCCGAGCG
GTGGTCAAGCCGCCCCGTGGCTGCGCCAGTGGCGACGTGTTCCTCTGCGA
GGGCCTGGCGGATGCGCGGCGGCGCTTCACGGACTTGATTGGGACCGCAA
AGTACGGCAGCCCCGGCGAAATCAACGATCAAGCGTTGATCCAGGAGTAC
CTGCGCGGGACAGAGTACGTCGTGGACACTATGAGCCGTGCCGGGAAACA
CAAGGCGAGGAAGGGGATGAACGTGATGGCGGTGTGGCGCTACGACAAGC
GGCCCATCAACGGCGCCCCCTTCGTCTACTACTGCACCGAGCTGCGCTCC
TCCGGGGCTGCGCCGTCGGGCGCGATG
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