mRNA_P-wetherbeei_contig1887.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 238 bits (606), Expect = 5.210e-67 Identity = 154/460 (33.48%), Postives = 219/460 (47.61%), Query Frame = 3
Query: 207 WTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANA-----ALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAEVGEIDLMWL----PPEVQAGLNNINMLADKI 1559
W K++ T P+ RSGH+V + G K Y+FGGC LND++T D+++ +W VT A GD VPS R MCA + + GG G + D LR+D+ EFDTR W +I G G D A G ++C + + L++FGGSTG Y ND F +++ W +LAT G PSPRYKH+AV+ GDA++V+GGG F+P +A +++++LDL L W A GG +P+ R AHS +FD ++ Y+WGGFT + Q + D A W E+ + P XX P AR+FH AVF+ G+ V G+NG + +DVWR+ V TPP+L LA RA++ G +M L P EV G+ N+N A ++
Sbjct: 30 WVKLQ--TSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVT-AKGDS--VPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWS-------KITGDGED---------------------APSRFYGQTVCRYGSV--LLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPS-----------------------------------------------AXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRS-GVQHMMCLETFVPQEVLDGVLNMNESAGRL 406
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.430e-65 Identity = 145/460 (31.52%), Postives = 217/460 (47.17%), Query Frame = 3
Query: 201 HRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCAN-----AALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAE--VGEIDLMWLPPEVQAGLNNINMLADKI 1559
++WTK+ NT +SP+ RSGH+VV+ G KAY+FGGC LND++ ++E +W++VT G P R MCA L + GG G + D LR D+ E++ +W + D+ + C G S+C + + L++FGGSTG Y ND F +++ +W RL T+G +PSPRYKH+AV+ G ++V+GGG F+P ++ ++++ LDL L W G +PK R AHS +FD E+ Y+WGGFT+ + Q + TA W + + + GG A PPAR+FH A F++G V G+NG + SDVWR+ V TPPSL+ L + S E + E+D M P E+ G+ +N AD++
Sbjct: 35 NQWTKL--NTSGDSPSPRSGHDVVVIGHKAYLFGGCGGEQDQITCLNDVYVFNLELHRWSKVTVKGD----APLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILT----------------------------DSEETPCKFYGQSVCTYGDN--LLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGG--------------------------------------------------ATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKSGGEAPLKEMD-MRAPAELVQGVREMNEHADRL 407
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.720e-60 Identity = 137/315 (43.49%), Postives = 172/315 (54.60%), Query Frame = 3
Query: 243 PTARSGHNVVLAGRKAYVFGGC--------ANAA--------------LNDLHTLDMETLKWTEVTPA--GGDGAVV---PSVRTCAAMCANDDGTA---LYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLV------MLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDL 1079
PTARSGH +A YVFGGC A+AA L DLH D+ +W+EV P D A P+ RTCAAMCA++ A L+L GGAGDDP DLR +EF RR +W+LLY GG A P + C RIGH++ + +T RL++FGGSTG+EYFND AF LA G W LAT G+ PSPRYKH+A + D ++VVGGG+FEP L+V++L L +L W V G P+ RAAH LA+D+ A Y+WGGFT+GMEL L L
Sbjct: 17 PTARSGHCATVARDALYVFGGCGHPTAASSASAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPTRAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLY-------------------EGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRL 312
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.380e-59 Identity = 126/296 (42.57%), Postives = 163/296 (55.07%), Query Frame = 3
Query: 243 PTARSGHNVVLAGRKAYVFGGCANAA------LNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSW-KLLY-PAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDK-ESAACYVWGGFTAGMELSQRLYKLDLRTARWEEV 1103
P+ RSGH V L G KAY+FGGC +A LNDLH+ D+ETL+W V G + P+VR AAMCA DDG L L GGAGDDPD LR+D+Y F T W KLL P A C G S C + ++ FGGSTG EY N ++L RW +LAT G P+PRYKH+A IHG +++V+GGG F+P ++V +LDL + W VA G++P R AH+ A+D E A Y+WGGFTAG++ + Y+L L T W +
Sbjct: 76 PSPRSGHTVCLVGGKAYLFGGCGRSAGVEDKCLNDLHSFDVETLRWERVETRGAEQ---PAVRRSAAMCALDDGRFL-LSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFC------------------------------LCGQSACLWQDT--ILFFGGSTGLEYSNALHQYNLKTNRWQQLATLGPRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTTMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSLDTHTWTAI 335
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.500e-57 Identity = 119/333 (35.74%), Postives = 171/333 (51.35%), Query Frame = 3
Query: 153 GSSRLRTSSFVSTETLHRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCAN------AALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDG-TALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVT 1130
G SR R + +TL RW ++ T + P+ RSGH+VV+ GRKAY+FGGC A LND++T D++T +W V G P R MCA ++ + GG G + D LR D+ EFDTR +W+ + D+ + C G S+C + S L++FGGSTG Y ND + ++ RW +L T G P+PRYKH+AVI G +++V+GGG F+P ++ ++V +LDL L W VA G +PK R AHS +D + ++WGGFT+ + Q Y L TA W A V+
Sbjct: 2 GLSRKRPAHVAWEDTLGRWVCLQ--TSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEP----PLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVT----------------------------DSEETPCRFYGQSLCTYGES--LLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVS 298
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA) HSP 1 Score: 188 bits (478), Expect = 6.360e-49 Identity = 107/245 (43.67%), Postives = 138/245 (56.33%), Query Frame = 3
Query: 390 GAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDA------GQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDK-ESAACYVWGGFTAGMELSQRLYKLDLRTARWEEV 1103
G V P+VR AAMCA DG L L GGAGDDPD LR+D+Y FDTR +W +L GDDA GQ+AC C+ T ++ FGGSTG EY N+ F++ L RW +LAT G P+PRYKH+A IH D ++VVGGG F+P +V KLDL+ + W+ VA GA+P R AH+ A+D + A Y+WGGFTAG++ + YKL L T W +
Sbjct: 19 GTVRPAVRRSAAMCAVGDGRFL-LSGGAGDDPDHLRSDLYMFDTRTRTWTMLLE--------------------------GDDAKPFCLCGQSAC-------CWRGT---VLFFGGSTGLEYSNELFSYDLRTNRWQQLATKGPRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEWTTVATKGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLALDTHTWTSI 226
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK) HSP 1 Score: 163 bits (412), Expect = 1.670e-41 Identity = 98/285 (34.39%), Postives = 142/285 (49.82%), Query Frame = 3
Query: 243 PTARSGHNVVLAGRKAYVFGGCANA-----ALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFR-LATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDL 1079
P RSGH+V+ + ++FGGC + ++D ++ TL W++V G PS R MC L + GG G + + DM+E++ R W+ L DD G C G + C L++FGGS+G+EY + + F L R+ +AT GD PS RYKH+AV+ GD L+V+GGGA++P+ +L++F+LDL W VA GA P R AH+ A+D S A Y+WGGF A +E Y+LDL
Sbjct: 12 PGERSGHSVLAMNGQVFLFGGCGGSEGNTPCMSDFICFNLSTLTWSKVQAEG----TTPSPRASFEMCRGCLPDTLIIAGGTGSEG--ICGDMHEYNARTRRWRQLVAR--------------------------DDPGSR-CRYYGQTACPWGDR-TLVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTGDRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTRWHWERVAAAGAAPPARVAHTCAYDPRSRALYLWGGFDAELERLNDFYRLDL 262
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A7S3UWF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF1_HETAK) HSP 1 Score: 159 bits (401), Expect = 1.310e-38 Identity = 105/312 (33.65%), Postives = 146/312 (46.79%), Query Frame = 3
Query: 207 WTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANAA---LNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRN-DMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGST-GYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVAC-------GGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVV 1106
W K+ + E P RSGH V++A KAY+FGG A L+D ++ D W V GG P RT AMC D +YL GG D L + ++YE+D S W L+ I +D G S Y+ +++ FGG G + N+ L RW R+ T GD+P PRYKH+A + GD L+V+GGG + P E L+V+ LDL W+ V GG +P+GRAAH+ +D + A Y+WGGF G+ ++LDLRT +W
Sbjct: 52 WEKVSCS--GEMPCERSGHAVIVAQGKAYLFGGYGGANPCHLSDFYSFDFAKGAWETVRAPGG-----PCPRTAFAMCVTPD-DFVYLWGGTDHDLQGLEDQELYEYDVYNSRWSLVDTVNKGI----LD-----------------------LRYFGRSASYYKR--KILYFGGGVKGGRFTNELIQLDLDSFRWERVPTTGDLPCPRYKHQACVVGDRLYVLGGGCYLPPEETLDVYCLDLTTRVWAKVGAAAAAADGGGELPEGRAAHTCEYDAATGALYLWGGFNQGLVPLFDFWRLDLRTHQWARAA 326
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: D8LLR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR4_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.110e-37 Identity = 137/461 (29.72%), Postives = 180/461 (39.05%), Query Frame = 3
Query: 243 PTARSGHNVVLAGRKAYVFGGCANAALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLV------MLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAEV----------------GEIDLMWLPPEVQAGLNNINMLADKI 1559
PTARSGH +A YVFGGC + PA A SV A AL +C G D++ +D R W GG A P + C RIGH++ + +T RL++FGGSTG+EYFND AF LA G W LAT G+ PSPRYKH+A + D ++VVGGG+FEP L+V++L L +L W +P A + A AA V G +LS W + SG GG + + A T P RSFH A F+ G+ + GGS+G K D+WR+ ETPP L LA RA VS A G+ +L LP E++ L +NM A+ +
Sbjct: 17 PTARSGHCATVARDALYVFGGCGH--------------------PAAASSAAAASVD------AQLPAEALPICLG----------DLHVYDLARQRWS----------------------EGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERAP----VPSTATAAAAA----PAAVPV-----VGEKLS------------WVSLP-----------SGQGGSAAFAANAEE----------------------------------AGRATPSSPTGRSFHCAFFHGGACYITGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGRVGGAGGDGKCELGGLPGELREALQRLNMQAEVV 349
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.340e-37 Identity = 111/424 (26.18%), Postives = 176/424 (41.51%), Query Frame = 3
Query: 201 HRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANAALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGG-AIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVS 1469
HRW + + T + PT RSG + Y+FGGC ND++ D++T +W VT G PS R MC+ + G G ++D++ FD RR W+ L+ ++ A G SIC+H ++ L+++GG++G EY+ +AF+L G R+ T+G PS RYKH + ++G+ ++V GGG F P+E + + KL+L L W + + GR A + FD ES+ +V+GGF + + Q D+ + W EV ++ P R+FH V +G+ + G++G DVWRY++ TPP L LA RA ++
Sbjct: 11 HRW--LRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQNDIYRFDVDTHEWCAVTCDDG-----PSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLF--------------------------------ESPRAAYGVSICWHGST--LLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEV-------------------------------------------------------------GGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLT 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1887.2.1 >prot_P-wetherbeei_contig1887.2.1 ID=prot_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=498bp MAPRICHPVVPVHGYAPALPRGGNWKWGSSRLRTSSFVSTETLHRWTKIEback to top mRNA from alignment at P-wetherbeei_contig1887:1497..4185- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1887.2.1 ID=mRNA_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2689bp|location=Sequence derived from alignment at P-wetherbeei_contig1887:1497..4185- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1887:1497..4185- >mRNA_P-wetherbeei_contig1887.2.1 ID=mRNA_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1494bp|location=Sequence derived from alignment at P-wetherbeei_contig1887:1497..4185- (Phaeothamnion wetherbeei SAG_119_79)back to top |