mRNA_P-wetherbeei_contig18840.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: A0A3A0F554_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0F554_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 1.410e-7 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 31 LALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRLDGAN-GALLGTVNSKGGVSVLMGG 243
LALA TP V A+ PFDG WTV+I+T +G C + ++ V + DGR+ A G L G VNS G V V + G
Sbjct: 14 LALACVATPSAVLAS-PFDGQWTVTIVTNAGDCQPSASYPVVVSDGRISAAGTGELAGKVNSSGVVRVSLQG 84
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: A0A525KPK9_BRASZ (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525KPK9_BRASZ) HSP 1 Score: 53.1 bits (126), Expect = 1.570e-6 Identity = 26/72 (36.11%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 28 VLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRLDGANGALLGTVNSKGGVSVLMGG 243
+LA+A A+T A P+DG W+V+++T+SGSC+ + +++ DGR+ A + GT+ +G V V + G
Sbjct: 14 ILAVAGALTAAPGHAQSPYDGLWSVTVVTKSGSCEPSTRSTLTVADGRVSAAGADISGTIGREGLVRVSIHG 85
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: UPI001843B472 (Uncharacterized protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI001843B472) HSP 1 Score: 52.8 bits (125), Expect = 2.400e-6 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 19 SAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDG 168
SAAVL AA + SA P+DG+W+V I+T G+CDRAY +++ I DG
Sbjct: 8 SAAVLLALAAFSSQPASARTPYDGAWSVVIITDRGTCDRAYRYSIQITDG 57
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: UPI001AECBFCA (hypothetical protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=UPI001AECBFCA) HSP 1 Score: 52.0 bits (123), Expect = 3.000e-6 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 19 SAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDG 168
SAA + AA SA P+DG+W+V I+T G+CDRAY ++V IVDG
Sbjct: 8 SAAAAVVLAAFASQPASARTPYDGAWSVVIITDRGTCDRAYRYSVQIVDG 57
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: UPI001913F36B (hypothetical protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=UPI001913F36B) HSP 1 Score: 52.4 bits (124), Expect = 3.370e-6 Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 19 SAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDG--RLDGANGALLGTVNSKGG---VSVLMGG 243
SAA + AA SA P+DG+W+V I+T G+CDRAY ++V IVDG R G G KGG VSV GG
Sbjct: 8 SAAAAVVLAAFASQPASARTPYDGAWSVVIITDRGTCDRAYRYSVQIVDGIVRYAGEMGMDFRGRVGKGGAVAVSVAAGG 87
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: A0A4Z0NLJ2_9HYPH (Uncharacterized protein n=2 Tax=Methylobacterium nonmethylotrophicum TaxID=1141884 RepID=A0A4Z0NLJ2_9HYPH) HSP 1 Score: 52.4 bits (124), Expect = 3.570e-6 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 22 AAVLALAAAMTP-----GQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRLDGANGA---LLGTVNSKGGV 225
AA LAAA+ P G+ A FDG+W+V ++T+SGSCDRAY + V I +G+ A G + G V GGV
Sbjct: 7 AAGACLAAAVAPALAAKGRAQAQNRFDGTWSVEVITESGSCDRAYRYGVIIQNGQARYAGGGDFTITGRVQPSGGV 82
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: A0A6N7GXQ2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GXQ2_9HYPH) HSP 1 Score: 52.0 bits (123), Expect = 4.550e-6 Identity = 35/74 (47.30%), Postives = 41/74 (55.41%), Query Frame = 1
Query: 19 SAAVLA-LAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRL--DGANGALLGTVNSKGGVSV 231
SA VLA L P SA FDG+W+V I+TQSG+CDRAY + VSI G + DG G V G V V
Sbjct: 5 SAGVLAFLCLTALPDTASAQRAFDGNWSVLIVTQSGNCDRAYRYGVSIRSGHVLYDGGAVNFTGRVAPNGAVRV 78
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: A0A327JSI3_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327JSI3_9HYPH) HSP 1 Score: 52.0 bits (123), Expect = 4.730e-6 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 16 ASAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDG--RLDGANGA-LLGTVNSKGGVSV 231
A AA+LAL A ++ SA P+DG+W+V I+T G+CDRAY ++V IVDG R G G G V G +SV
Sbjct: 8 AGAALLALTA-ISATAASARTPYDGAWSVLIITDRGTCDRAYRYSVQIVDGIVRYAGEMGLDFRGRVGRGGAISV 81
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: K8P012_9BRAD (Uncharacterized protein n=6 Tax=Bradyrhizobiaceae TaxID=41294 RepID=K8P012_9BRAD) HSP 1 Score: 51.6 bits (122), Expect = 9.050e-6 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 4 FRLAASAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRL 174
F LAA AA L AA + A FDGSW V+I+TQSG+CD AY++ V + GR+
Sbjct: 19 FALAAFAAALLTAAIVLATSAKAGSSFDGSWKVTIITQSGNCDPAYSYPVRVEGGRV 75
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Match: UPI0017C224E8 (Uncharacterized protein n=1 Tax=Rhodopseudomonas sp. TaxID=1078 RepID=UPI0017C224E8) HSP 1 Score: 50.8 bits (120), Expect = 1.140e-5 Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 34 ALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAVSIVDGRLDGANGALLGTVNSKGGVSVLMGG 243
A AA + G A P+DG WTV+IMT +GSC+ + + +++ DG++ + G+V G V V + G
Sbjct: 13 AAAAGVLAGPAMAETPYDGLWTVTIMTNTGSCEASARYPLTVADGKVSAQGADVTGSVGRAGNVRVSIRG 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18840.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18840.2.1 >prot_P-wetherbeei_contig18840.2.1 ID=prot_P-wetherbeei_contig18840.2.1|Name=mRNA_P-wetherbeei_contig18840.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp KFRLAASAAVLALAAAMTPGQVSAAMPFDGSWTVSIMTQSGSCDRAYNFAback to top mRNA from alignment at P-wetherbeei_contig18840:805..1164- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18840.2.1 ID=mRNA_P-wetherbeei_contig18840.2.1|Name=mRNA_P-wetherbeei_contig18840.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig18840:805..1164- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18840:805..1164- >mRNA_P-wetherbeei_contig18840.2.1 ID=mRNA_P-wetherbeei_contig18840.2.1|Name=mRNA_P-wetherbeei_contig18840.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig18840:805..1164- (Phaeothamnion wetherbeei SAG_119_79)back to top |