mRNA_P-wetherbeei_contig18832.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: D7G5A8_ECTSI (Na_H_antiporter domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A8_ECTSI) HSP 1 Score: 233 bits (594), Expect = 3.590e-70 Identity = 120/171 (70.18%), Postives = 139/171 (81.29%), Query Frame = 1
Query: 13 PFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSATGEG 525
P T+V +L SCDSV+ L+WAS+AGW+T L LV Q +L L EAM TWM GMKEVLE QFVLVLAWALGQVV +V TA YL+GALE G+PP +LPAL++ +C IS+A GSTFGTMGIVFPLVGPLAWRLG G + ++ HC C+LGASIFGNVCSPISDT ILTS ATG G
Sbjct: 421 PKTMVNILSSCDSVSVLIWASAAGWLTSLVLVCGQGILTLPEAMETWMEGMKEVLEPQFVLVLAWALGQVVKDVQTAEYLSGALETGIPPYMLPALISALCYVISYACGSTFGTMGIVFPLVGPLAWRLGNGDIEFLHHCFACILGASIFGNVCSPISDTTILTSLATGCG 591
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S3C0U7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C0U7_9EUKA) HSP 1 Score: 197 bits (502), Expect = 3.650e-61 Identity = 104/157 (66.24%), Postives = 125/157 (79.62%), Query Frame = 1
Query: 46 DSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
DSV AL+W S+AGWM +A+VL QRL+ LGEAMA W G KEVLE FVL+LAWALG V+ +VGTA +LAGAL+AG+P LPAL++++C AISFA GS+ GTMGIVFPLVGPLA R+GGGS Y+ C G V+G S+FGN+CSPISDT ILT AT
Sbjct: 2 DSVTALIWGSAAGWMVSMAMVLWQRLISLGEAMAAWTEGTKEVLEPTFVLLLAWALGAVISDVGTADFLAGALQAGLPAWSLPALISLLCYAISFACGSSIGTMGIVFPLVGPLALRMGGGSALYLQQCFGAVMGGSLFGNLCSPISDTTILTVLAT 158
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S3SU47_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SU47_EMIHU) HSP 1 Score: 191 bits (485), Expect = 1.030e-57 Identity = 104/172 (60.47%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 1 AMQPPFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
A +PP ++V +L DS+ AL+WAS+AGW++ L LVLAQ L L EAMA W G+KEVLE VL+LAWALG V+ +VGTAT+LA +L G+P LP +VA++ AISFA+GS+FGTMGIV PLVGPLA LGGGS Y+ HC+G LG + FGN+CSPISDT ILT AT
Sbjct: 59 ASRPPLSLVSILSHSDSITALIWASAAGWLSALGLVLAQGALALDEAMAAWAEGLKEVLEPMLVLLLAWALGAVIADVGTATFLARSLREGLPRWSLPPIVALLSHAISFASGSSFGTMGIVLPLVGPLAQALGGGSREYLLHCIGSCLGGATFGNICSPISDTTILTVLAT 230
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A0M0JVA2_9EUKA (Na+ h+ antiporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVA2_9EUKA) HSP 1 Score: 192 bits (489), Expect = 6.230e-56 Identity = 100/172 (58.14%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 1 AMQPPFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
A++P ++V L DSV+AL+W S+ GW+ + LVL+QRLL L EAM W+ G KEVLE +LVLAW+LG V+ +VGTA +LA AL+ G+P LPA +A +C AISFA+GS GTMGIVFPLVGPLA RLGGGS+ ++ C G ++GASIFGN+CSP+ DT ILT+ AT
Sbjct: 273 AVRPAVSIVNSLRYADSVSALIWGSTFGWLAAMVLVLSQRLLKLEEAMGAWIVGAKEVLEPMIILVLAWSLGSVIKDVGTAEFLASALQTGLPAWALPACIAALCYAISFASGSAIGTMGIVFPLVGPLAMRLGGGSLSFLHQCFGAIMGASIFGNLCSPLGDTSILTALAT 444
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S0P500_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P500_9EUKA) HSP 1 Score: 194 bits (493), Expect = 1.580e-55 Identity = 106/170 (62.35%), Postives = 131/170 (77.06%), Query Frame = 1
Query: 7 QPPFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
+P T+V +L CDS+ ALVW+S+ GW+ LALVLAQRLL L EAM WM G+K+VLE FVL+LAWALG V+ V TA YLA AL AG+P LPALV+++ AIS+A GS+FGT+GI+ PLVGPLA +LGGGS Y+ HC+G VLG ++FGN+CSPISDT ILT AT
Sbjct: 413 RPALTLVSMLSECDSINALVWSSAVGWLVTLALVLAQRLLTLSEAMGAWMEGLKDVLEPCFVLLLAWALGSVIGLVKTADYLASALHAGLPRWALPALVSLLAHAISYACGSSFGTIGIILPLVGPLAMKLGGGS-DYLLHCIGSVLGGAVFGNICSPISDTTILTVLAT 581
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S2UZM1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM1_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.120e-55 Identity = 105/168 (62.50%), Postives = 128/168 (76.19%), Query Frame = 1
Query: 19 TVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAG-VPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSATG 519
+V+ LL +CDSV AL+WAS+ G++ LV AQ L+LGE M WM GMK+VLE QFVLVLAWALGQVV +VGTA +L+ L +G V LLPALV+V+C A SFA GS+FGTMGIVFPLVGPLA++LGGG V ++ HC +L + FGNVCSPISDT ILT +TG
Sbjct: 306 SVIDLLSNCDSVKALLWASAGGFLVSTILVTAQGFLNLGEVMEAWMEGMKDVLEPQFVLVLAWALGQVVSDVGTAEFLSSTLTSGYVSAPLLPALVSVLCFATSFACGSSFGTMGIVFPLVGPLAYKLGGGDVDFLMHCFAAILAGATFGNVCSPISDTTILTCLSTG 473
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S0Q8N7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8N7_9EUKA) HSP 1 Score: 182 bits (462), Expect = 5.150e-54 Identity = 104/172 (60.47%), Postives = 125/172 (72.67%), Query Frame = 1
Query: 1 AMQPPFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
A +P VV L DSV AL+W S GW+ LALVL+QRLL LGEAM WM GMK+VLE FVL+LAW LG V+ V TA +LA L G+P LPALV+++ AIS+A GS+FGTMGI+ PLVGPLA +LGGGS Y+ HC+G VLG ++FGN+CSPISDT ILT AT
Sbjct: 73 ATRPAANVVNALRFADSVTALLWGSVGGWLAALALVLSQRLLSLGEAMEAWMEGMKDVLEPCFVLLLAWGLGSVIGLVKTADFLARVLYVGLPRWALPALVSLLAHAISYACGSSFGTMGIILPLVGPLAMKLGGGS-DYLLHCIGSVLGGAVFGNICSPISDTTILTVLAT 243
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S3RS74_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RS74_9SPIT) HSP 1 Score: 167 bits (423), Expect = 2.350e-49 Identity = 87/147 (59.18%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 64 VWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILT 504
VWAS+AGW+ L LV+ Q++L L EAMA W+ G+KEVLE VL+LAWALG V+ +VGTATYLA +L+AG+P LP +V+++ ISFA+GS FGTMGIV PLVGPLA +G G Y+ HC+G +G + FGN+CSPISDT IL+
Sbjct: 1 VWASAAGWIATLFLVIGQQMLTLSEAMAAWIEGIKEVLEPTIVLLLAWALGSVIADVGTATYLAKSLQAGLPRWSLPPIVSLLSHVISFASGSAFGTMGIVLPLVGPLADAIGRGEHDYLVHCVGAAIGGATFGNICSPISDTTILS 147
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A8J2WUT3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUT3_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.930e-46 Identity = 94/167 (56.29%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 19 TVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAG-VPPSLLPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
TV+Q L DSV AL+W S+ G L L+L+Q++LDL AM T + GMKEV+E VL LAWALG ++ GTA+++A AL +G +P LPA +++ ISFATGS+FGTMGI+FPL+GPLAW LGGG + HC GCVLG S+FGNV SPI+DT ILT AT
Sbjct: 344 TVMQALAKGDSVLALLWGSTLGCAAALTLLLSQKILDLDTAMGTVVEGMKEVIEPIIVLALAWALGGIIQSTGTASFIAAALTSGGLPAWALPASTSILSYVISFATGSSFGTMGILFPLIGPLAWELGGGDQRLLTHCFGCVLGGSLFGNVFSPIADTTILTQLAT 510
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Match: A0A7S2AUZ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AUZ2_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.500e-45 Identity = 92/169 (54.44%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 13 PFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWMAGMKEVLEAQFVLVLAWALGQVVLEVGTATYLAGALEAGVPPSL-LPALVAVMCCAISFATGSTFGTMGIVFPLVGPLAWRLGGGSVPYMDHCLGCVLGASIFGNVCSPISDTVILTSSAT 516
P ++V L +CDSV AL+W S+ G + + L+L+Q++++LG+A+ + GM+EV+E VL LAWALG ++ GTAT+LA AL +G P+ L L +V+ ISFATGS+FGTMGI+FPLVGPLAW LGG SVP + HC G VLG IFGNV SPI+DT +LT AT
Sbjct: 382 PHSLVAALSACDSVKALLWGSTLGGVVAVTLLLSQKIMNLGDAVTAFTEGMREVIEPCVVLSLAWALGSIIAATGTATFLASALTSGGLPAWGLAPLTSVLAYVISFATGSSFGTMGILFPLVGPLAWTLGGQSVPMLTHCFGAVLGGCIFGNVFSPIADTTVLTVLAT 550 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18832.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18832.1.1 >prot_P-wetherbeei_contig18832.1.1 ID=prot_P-wetherbeei_contig18832.1.1|Name=mRNA_P-wetherbeei_contig18832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp MQPPFTVVQLLCSCDSVAALVWASSAGWMTVLALVLAQRLLDLGEAMATWback to top mRNA from alignment at P-wetherbeei_contig18832:113..955+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18832.1.1 ID=mRNA_P-wetherbeei_contig18832.1.1|Name=mRNA_P-wetherbeei_contig18832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig18832:113..955+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18832:113..955+ >mRNA_P-wetherbeei_contig18832.1.1 ID=mRNA_P-wetherbeei_contig18832.1.1|Name=mRNA_P-wetherbeei_contig18832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig18832:113..955+ (Phaeothamnion wetherbeei SAG_119_79)back to top |