prot_P-wetherbeei_contig18808.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18808.1.1
Unique Nameprot_P-wetherbeei_contig18808.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length42
Homology
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A7S2WW38_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW38_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.720e-8
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICLD+V+  Q   L++C H++C+ CIL+WSEV N CP CK
Sbjct:   73 CGICLDQVE--QRGRLESCQHVFCFGCILQWSEVVNTCPLCK 112          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A2P2J5H4_RHIMU (Uncharacterized protein MANES_08G113500 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J5H4_RHIMU)

HSP 1 Score: 56.6 bits (135), Expect = 3.480e-8
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 CSICLDEVDKSQ-AATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICL E +K +   TL+ CSH +C+ CI++WS+V +RCPCCK
Sbjct:  168 CGICLSEENKRRFRGTLNCCSHYFCFACIMEWSKVESRCPCCK 210          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A7S2KPG2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPG2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.490e-8
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICL+   +   A +DNC H++C+TCI KWSE  N CP CK
Sbjct:  158 CCICLEVPTQENEARVDNCEHIFCFTCIEKWSERENTCPLCK 199          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: D7G8F9_ECTSI (Splicing factor, arginine/serine-rich 2,rnap interacting protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F9_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 CSICLDEVDKSQAA-------TLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICL+++  +           LD CSH YCYTCIL+WS++TN+CP CK
Sbjct:  706 CMICLEKLSDAAEGGGAKLLGLLDACSHRYCYTCILEWSKITNKCPQCK 754          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A6H5K8F6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F6_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 CSICLDEVDKSQAA-------TLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICL+++  +           LD CSH YCYTCIL+WS++TN+CP CK
Sbjct:  639 CMICLEKLSDAAEGGGSKLLGLLDACSHRYCYTCILEWSKITNKCPQCK 687          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: B8CB72_THAPS (RING-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB72_THAPS)

HSP 1 Score: 54.3 bits (129), Expect = 2.280e-7
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 CSICLDEVDK-SQAATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C ICLD     +Q ATL+ C+H +C+ CI +W+   NRCPCCK
Sbjct:  147 CPICLDNPPSPTQTATLNGCTHKFCFDCIDRWANTENRCPCCK 189          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A8C4ZQX7_GADMO (Uncharacterized protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZQX7_GADMO)

HSP 1 Score: 53.1 bits (126), Expect = 2.460e-7
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 0
Query:    1 CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCP 39
            C +CL        ATL+NC H +C TCIL+WS++ N CP
Sbjct:   27 CPVCLSPFSGQSVATLENCQHAFCLTCILEWSKIANSCP 65          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: A0A1E7FRL3_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRL3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.260e-7
Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C IC+ +V+ +  A++++CSH +C+ CI KWSE  N+CP CK
Sbjct:  186 CCICMCDVEPNDLASINSCSHQFCFGCIEKWSERENKCPLCK 227          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: UPI0011B7C434 (PHD and RING finger domain-containing protein 1-like isoform X1 n=2 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B7C434)

HSP 1 Score: 53.1 bits (126), Expect = 5.270e-7
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 0
Query:    1 CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCP 39
            C +CL        ATL+NC H +C TCIL+WS++ N CP
Sbjct:   27 CPVCLSPFSGQSVATLENCQHAFCLTCILEWSKIANSCP 65          
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Match: L8H6S4_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6S4_ACACA)

HSP 1 Score: 53.1 bits (126), Expect = 5.830e-7
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 CSICLDEVDKSQ---AATLDNCSHLYCYTCILKWSEVTNRCPCCK 42
            C+ICLD+           L+ CSH++CY+CIL+WS V N CP CK
Sbjct:   11 CAICLDKAGNQGPQGTGELNGCSHIFCYSCILEWSNVANSCPLCK 55          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18808.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WW38_9STRA1.720e-854.76Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A2P2J5H4_RHIMU3.480e-853.49Uncharacterized protein MANES_08G113500 n=1 Tax=Rh... [more]
A0A7S2KPG2_9STRA6.490e-852.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
D7G8F9_ECTSI1.210e-748.98Splicing factor, arginine/serine-rich 2,rnap inter... [more]
A0A6H5K8F6_9PHAE1.210e-748.98RING-type domain-containing protein n=1 Tax=Ectoca... [more]
B8CB72_THAPS2.280e-751.16RING-type domain-containing protein n=1 Tax=Thalas... [more]
A0A8C4ZQX7_GADMO2.460e-748.72Uncharacterized protein n=1 Tax=Gadus morhua TaxID... [more]
A0A1E7FRL3_9STRA4.260e-747.62RING-type domain-containing protein n=1 Tax=Fragil... [more]
UPI0011B7C4345.270e-748.72PHD and RING finger domain-containing protein 1-li... [more]
L8H6S4_ACACA5.830e-748.89Zinc finger, C3HC4 type (RING finger) domain conta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 1..41
e-value: 3.6E-6
score: 36.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 1..42
e-value: 2.2E-11
score: 43.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1..42
score: 12.84335
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..42
e-value: 4.7E-11
score: 44.0
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 19..28
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18808contigP-wetherbeei_contig18808:8..286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18808.1.1mRNA_P-wetherbeei_contig18808.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18808 8..286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18808.1.1 ID=prot_P-wetherbeei_contig18808.1.1|Name=mRNA_P-wetherbeei_contig18808.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=42bp
CSICLDEVDKSQAATLDNCSHLYCYTCILKWSEVTNRCPCCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS