mRNA_P-wetherbeei_contig1880.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: A0A836CEA8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA8_9STRA) HSP 1 Score: 238 bits (608), Expect = 4.470e-68 Identity = 127/208 (61.06%), Postives = 169/208 (81.25%), Query Frame = 1
Query: 43 LGPQAERT-QWVNRNADLPLPAERESLVMDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKALQLQYPAAAAGLSRADVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALV---QRTEASNGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASAD 654
+GPQAER QW NR+ +LP P +RE+L++++MAD+RLYEQELAR + F++D +QR SKEL+ QL+YP AAA + RAD+D QPD+P WV SA+V+SPLLAAYD R+Q +LE LV+SQ+GEL +LT+RTE L++ENERLRE Q+QD+DALV Q+T A GL GAGARE++DE+NER++ILMAENAL+A+QT+ L EL+R A+
Sbjct: 28 VGPQAERNMQWSNRSGELPPPPQREALMVESMADRRLYEQELARLRADAKFMEDQLQRTSKELRVYQLKYPQAAARIGRADLDAQPDVPGWVASAEVMSPLLAAYDGRIQ-DLEGLVESQRGELAALTERTEALVAENERLREGQVQDLDALVRVVQQTGADRGLHGAGAREMVDELNERISILMAENALMAEQTSVLSAELERTHAE 234
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: D8LH30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH30_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.120e-57 Identity = 121/250 (48.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 1 GGARNARPTVDMATLGPQAERTQ-WVNRNADLPLPAERESLVMDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKALQLQYPAAAAGLSR------------------ADVDGQP-----DLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEASNGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
GG PT + LGPQAER+ W+NR L P ERE+LV+DA+ADKRLYEQELAR EN FL+D V+R+S ELK Q+++P AAA + +V GQ LPPWV S++V+SPLLAAYDAR+Q +LE V +Q+ +E L RT L+ EN+ LR+ +++D LVQ+ AS GLGG GARE++ E+NER+N+LMAEN ++ADQT+ + +ELD +LE+RE Q+
Sbjct: 132 GGPATIGPTGGIPRLGPQAERSSAWINREGGLQPPTEREALVVDALADKRLYEQELARTREENAFLQDQVRRVSAELKRYQVRFPRAAADAAAXXXXXXXXXXXXXXXXXXGEVSGQDAADDVPLPPWVTSSEVMSPLLAAYDARIQ-DLEGQVAAQRDGMEELAGRTHQLVEENDTLRQEHTRELDELVQQAGASGGLGGVGAREMVGELNERINVLMAENTVMADQTSAMAKELDAVHEELEDREAQM 380
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: A0A6H5JIX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX0_9PHAE) HSP 1 Score: 198 bits (503), Expect = 9.900e-54 Identity = 116/243 (47.74%), Postives = 156/243 (64.20%), Query Frame = 1
Query: 22 PTVDMATLGPQAERTQ-WVNRNADLPLPAERESLVMDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKALQLQYPAAAAG-----------------------LSRADVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEASNGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
PT + LGPQAER+ W+NR L P ERE+LV+DA+ADKRLYEQELAR EN FL+D V+R+S ELK Q+++P AAA +S D LPPWV S++V+SPLLAAYDAR+Q +LE +Q+ +E L RT L+ EN+ + + ++D LVQ+ AS GLGG GARE++ E+NER+N+LMAEN ++ADQT+ + +ELD DLE+RE Q+
Sbjct: 13 PTGGIPRLGPQAERSSAWINREGGLQPPTEREALVVDALADKRLYEQELARTREENAFLQDQVRRVSAELKRYQVRFPRAAADAAAXXXXXXXXXXXXXXXXXGGEVSGPDAADDVPLPPWVTSSEVMSPLLAAYDARIQ-DLERQNAAQRDGIEELAGRTRQLVEENDTAKHTR--ELDELVQQAGASGGLGGVGAREMVGELNERINVLMAENTVMADQTSAMAKELDAVHEDLEDREAQM 252
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: A0A7S3USD3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD3_HETAK) HSP 1 Score: 140 bits (352), Expect = 1.260e-34 Identity = 88/196 (44.90%), Postives = 121/196 (61.73%), Query Frame = 1
Query: 106 ERESLVMDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKALQLQYPAAAAGLSRADVDGQ-----PDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEASNGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
ER+ ++A +++R+YEQEL R E FLKD VQRLSKEL+A QL+YP A + AD D LPPW AD + PLL AYD R+ ELE Q +LE++ R E+LI+ENERLRE QI+ D + + + G EL+ ++NER+ +LMA+NAL+ DQT LG+EL++A DL R+ +
Sbjct: 1 ERDVPSLEAASNQRVYEQELKRVREEKAFLKDQVQRLSKELRAYQLKYPGAHSRAPTADGDDDGTTALDGLPPWATQADAMVPLLKAYDTRVA-ELEDQAGQQATQLEAVEARVESLIAENERLREAQIEGFDRVFTQQQ---GAETTMDEELIKDLNERIAVLMAQNALMNDQTTVLGKELEQAREDLAARDGTI 192
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: W4FLB8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLB8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.490e-17 Identity = 75/236 (31.78%), Postives = 123/236 (52.12%), Query Frame = 1
Query: 46 GPQAERTQWVNRNADLPLPA-ERESLV-MDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKAL--------QLQYPAAAAGLSRADVDGQPDL--PPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEASNGLGGAGAREL-------------LDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
GPQ ER++ + R+ + P ERE +V +D + Y+++ A H E FLK +++L +L+ + QLQ AD DG+ + PPW S + +SPL AAY+ R++ ELE+ + +L++ +L SEN+RL + ++ L+ EA + GG G+ + L EMNER++ LM+EN LLA+Q + + ELD D+ +R+ Q+
Sbjct: 6 GPQEERSRRLMRDPMMDAPTKEREFVVPVDFRMQEETYQEKFAAQHEEITFLKTYIEKLLNQLRRVLVKHNELEQLQTLCDPTTTHVAD-DGEDSMTPPPWFTSKEYMSPLFAAYEGRIK-ELESTCDKHRKDLDAFVAHATSLTSENDRLNQELTTALEKLIMHAEAPSS-GGRGSSDFFATLTPVDSTADQLAEMNERLDFLMSENNLLAEQRSLVETELDECQRDIHDRDDQL 238
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: W4FKT6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FKT6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.620e-17 Identity = 75/236 (31.78%), Postives = 123/236 (52.12%), Query Frame = 1
Query: 46 GPQAERTQWVNRNADLPLPA-ERESLV-MDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKAL--------QLQYPAAAAGLSRADVDGQPDL--PPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEASNGLGGAGAREL-------------LDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
GPQ ER++ + R+ + P ERE +V +D + Y+++ A H E FLK +++L +L+ + QLQ AD DG+ + PPW S + +SPL AAY+ R++ ELE+ + +L++ +L SEN+RL + ++ L+ EA + GG G+ + L EMNER++ LM+EN LLA+Q + + ELD D+ +R+ Q+
Sbjct: 6 GPQEERSRRLMRDPMMDAPTKEREFVVPVDFRMQEETYQEKFAAQHEEITFLKTYIEKLLNQLRRVLVKHNELEQLQTLCDPTTTHVAD-DGEDSMTPPPWFTSKEYMSPLFAAYEGRIK-ELESTCDKHRKDLDAFVAHATSLTSENDRLNQELTTALEKLIMHAEAPSS-GGRGSSDFFATLTPVDSTADQLAEMNERLDFLMSENNLLAEQRSLVETELDECQRDIHDRDDQL 238
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: A0A8J6CAH0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAH0_DIALT) HSP 1 Score: 72.8 bits (177), Expect = 1.840e-10 Identity = 69/192 (35.94%), Postives = 96/192 (50.00%), Query Frame = 1
Query: 181 ENVFLKDNVQRLSKELKALQLQYPAAAAGLSRA-DVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDI---DALVQRTEASNGL-GGAGARELL----DEMNERVNILMAENALLADQTANLGRE---LDRASADLEERETQVRRRGIGSERKCRKG 720
EN FL+D V+RL+ EL Q+ GLS + G LPPW+ S + VSPL+AAYD R+ ELE+ S + + L++ENERLR Q + E G GGA AR + E+ +R+++LMAEN +L DQ LG E L R A +RR+ G+ + R+G
Sbjct: 4 ENEFLRDQVRRLTLELGRQQV-------GLSSVPEYAGVGTLPPWMASPEHVSPLMAAYDRRIA-ELESTCASLREDNGRFQPEVSRLVAENERLRTEYRQALLGSSGAATAAELGGGAAGGAFARRVTLEESQELQQRLDLLMAENDVLTDQVRELGAEHGRLQREKAAHMGDAAALRRQLDGAREEAREG 187
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: H3HAM8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAM8_PHYRM) HSP 1 Score: 68.6 bits (166), Expect = 4.330e-9 Identity = 56/185 (30.27%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 166 ARAHTENVFLKDNVQRLSKELKAL-----QLQYPAAAAGLSRADVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLR-------ENQIQDIDALVQRTEASNG--LGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
AR E FL+ +RL +L+ L +L+ ++ D + + L PW+ +++ +PLL AYD +MQ ELET + + +E + R E L EN LR E + + + + A N L G E L E+NER+++LMAEN +L +Q + E+ +L +R+ Q+
Sbjct: 51 ARLADERDFLRSYAERLLVQLRGLLQHYGELERLKTLTDATQNDDEPRERLAPWLTASEYTNPLLQAYDLKMQ-ELETALGDNRKAMERVAARAEGLAKENTALRQELEVAGEKMVLRMQSEPKEMHAMNDDLLNMQGDGEYLQEINERIDVLMAENNMLMEQVSLQDDEIGAMKKELTDRDQQL 234
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: G4ZM34_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZM34_PHYSP) HSP 1 Score: 67.4 bits (163), Expect = 1.100e-8 Identity = 55/187 (29.41%), Postives = 95/187 (50.80%), Query Frame = 1
Query: 160 ELARAHTENVFLKDNVQRLSKELKAL-----QLQYPAAAAGLSRADVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTE---------ASNGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
E AR E FL+ +RL +L+ L +L+ A ++++ + L PW+ +++ +PLL AYD ++Q ELET + K ++ + R E+L EN LR+ + LV R + A + + E L E+NER+++LMAEN +L +Q + E+ +L +R+ Q+
Sbjct: 52 ESARLADERDFLRGYAERLLVQLRGLLQRYGELERLKTLADAAQSEEEPHERLAPWLTASEYTNPLLQAYDLKIQ-ELETAMVDNKKAIDRVAARAESLAKENTTLRQELEVAGEKLVLRMQNEPKEMHVMADDLMSIQENGEYLQEINERIDVLMAENNMLMEQVSLQDDEIGAMKKELTDRDQQL 237
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Match: D0MQG4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQG4_PHYIT) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-8 Identity = 65/230 (28.26%), Postives = 109/230 (47.39%), Query Frame = 1
Query: 46 GPQAERTQWVNRNADLPLPAERE--------SLVMDAMADKRLYEQELARAHTENVFLKDNVQRLSKELKAL-----QLQYPAAAAGLSRADVDGQPDLPPWVMSADVVSPLLAAYDARMQQELETLVKSQKGELESLTQRTETLISENERLRENQIQDIDALVQRTEAS------NGLGGAGARELLDEMNERVNILMAENALLADQTANLGRELDRASADLEERETQV 678
GPQAER++ + L P + E +L A E AR E FL+ +RL +L+ L +L+ A +++D D L PW+ +++ +PLL AYD ++Q ELET + K ++ + R E L EN LR+ + +V R + + + E L E+NER+++LMAEN +L +Q + E+ ++ +R+ Q+
Sbjct: 5 GPQAERSRRLETQGRLQAPPKPEPNLKPAGPTLPPSACISGCCVES--ARLADERDFLRGYAERLLVQLRGLLQRYGELEKLKTLADATQSDEDPHERLAPWLTASEYTNPLLQAYDLKIQ-ELETSLLDNKKAMDRVASRAEGLARENTTLRQELEVAGEKMVLRMQNEPRDMHEDFMNVHENGEYLQEINERIDVLMAENNMLMEQVSLQDDEMGAMKKEIIDRDQQL 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1880.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1880.2.1 >prot_P-wetherbeei_contig1880.2.1 ID=prot_P-wetherbeei_contig1880.2.1|Name=mRNA_P-wetherbeei_contig1880.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp MATLGPQAERTQWVNRNADLPLPAERESLVMDAMADKRLYEQELARAHTEback to top mRNA from alignment at P-wetherbeei_contig1880:4483..6154+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1880.2.1 ID=mRNA_P-wetherbeei_contig1880.2.1|Name=mRNA_P-wetherbeei_contig1880.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1672bp|location=Sequence derived from alignment at P-wetherbeei_contig1880:4483..6154+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1880:4483..6154+ >mRNA_P-wetherbeei_contig1880.2.1 ID=mRNA_P-wetherbeei_contig1880.2.1|Name=mRNA_P-wetherbeei_contig1880.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig1880:4483..6154+ (Phaeothamnion wetherbeei SAG_119_79)back to top |