mRNA_P-wetherbeei_contig1878.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1878.3.1
Unique NamemRNA_P-wetherbeei_contig1878.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: D8LJR7_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR7_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 3.740e-84
Identity = 137/216 (63.43%), Postives = 147/216 (68.06%), Query Frame = 1
Query:  295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
            KRTDY+ WDDYFMSVA+LSAMRSKDPSTQVGACIVN DKRIVGIGYNGFPMGCSDD LPWAR AD+ELDTKYP                                                      YVCHAEMNAILNKNSADV+GC IYVALFPCNECAKLIIQSGIREVV+LSDKY ++ SM ASRRLF L+GV+CRQH P +  ITIDFS  
Sbjct:  121 KRTDYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQADDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFDLSGVKCRQHIPKQDKITIDFSST 282          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A7SGH8_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SGH8_NEMVE)

HSP 1 Score: 252 bits (644), Expect = 8.230e-80
Identity = 133/248 (53.63%), Postives = 161/248 (64.92%), Query Frame = 1
Query:  208 VEEIGAVSKGGLSTKRPRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
            +EE G V++ G  T+ P + EST    + KRTDY+SWDDYFMSVA+LSA RSKDPS+QVGACIVN +++IVGIGYNG P GCSDD LPW R AD+ELDTKYP                                                      YVCHAEMNAILNKNSADV+GC +YVALFPCNEC+K+IIQ+G++EVVF+SDKYHD  SM ASRRL  LAGV+ RQ +P+ + I IDF+ + G+
Sbjct:   16 LEENG-VTENGNGTE-PETDEST-CKKLTKRTDYISWDDYFMSVAFLSAQRSKDPSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWNRHADDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSADVKGCTVYVALFPCNECSKIIIQAGLKEVVFVSDKYHDKPSMKASRRLLDLAGVKYRQFKPSMEKIVIDFNSIDGK 206          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A835YZN4_9STRA (Deoxycytidylate deaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN4_9STRA)

HSP 1 Score: 248 bits (634), Expect = 2.660e-78
Identity = 129/226 (57.08%), Postives = 145/226 (64.16%), Query Frame = 1
Query:  256 PRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDF 933
            P++  + T A  G R DY+ WDDYFMSVA+LSAMRSKDPSTQVGACIVN DKRIVGIGYNGFP GCSD+ LPWAR A NELDTKYP                                                      YVCHAEMNAILNKN+ADVRGC IYVALFPC +CAKLIIQSGI  VV++SDKY D+ +  ASRR+  LAGVRCR+H  AR+ +TIDF
Sbjct:   20 PQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYP------------------------------------------------------YVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: UPI000A2A6C22 (deoxycytidylate deaminase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6C22)

HSP 1 Score: 243 bits (620), Expect = 4.060e-76
Identity = 127/251 (50.60%), Postives = 158/251 (62.95%), Query Frame = 1
Query:  205 DVEEIGAVSKGGLSTKRPRSSES--TTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
            ++ + G++S+   S KR   +E   T    V KRTDY+SWD+YFM+VA+LSA RSKDPS+QVGACIVNADK+IVGIGYNG P GCSDD LPW R A++ELDTKYP                                                      YVCHAEMNAILNKNSA+V+G +IYVALFPCNEC+K+IIQSG++EVV+ SDKYH   SM ASRRL  +AGV+ RQ+ P +  I +DF+ + G+
Sbjct:   15 NILKNGSLSEQNDSIKRKSDTEDGITKKQKVSKRTDYLSWDEYFMAVAFLSAQRSKDPSSQVGACIVNADKKIVGIGYNGMPNGCSDDLLPWNREANDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSAEVKGASIYVALFPCNECSKIIIQSGVKEVVYASDKYHTKPSMIASRRLLDMAGVKHRQYTPPKSQIVVDFTAIDGK 211          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A3B3Z903_9GOBI (dCMP deaminase n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3Z903_9GOBI)

HSP 1 Score: 240 bits (613), Expect = 2.540e-75
Identity = 118/222 (53.15%), Postives = 145/222 (65.32%), Query Frame = 1
Query:  277 TAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
            T++P  KR D++ W +YFM+VA+LSA RSKDP++QVGACIVN + +IVGIGYNG P GCSDD LPW+RTAD++LDTKYP                                                      YVCHAE+NAI+NKNSADV+GC +YVALFPCNECAKLIIQ+GI+EVV+LSDKYHD+  MTASRRL  +AGV+ RQ +P R  I IDF+ +
Sbjct:   17 TSSPSRKRQDFLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNQENKIVGIGYNGMPNGCSDDLLPWSRTADDQLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCTLYVALFPCNECAKLIIQAGIKEVVYLSDKYHDTPGMTASRRLLSMAGVQFRQFKPKRTEIVIDFNSI 184          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7L4MV06_9AVES (DCTD deaminase (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4MV06_9AVES)

HSP 1 Score: 239 bits (611), Expect = 2.980e-75
Identity = 119/223 (53.36%), Postives = 141/223 (63.23%), Query Frame = 1
Query:  283 APVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
            A   KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVNA+ +IVGIGYNG P GCSDD LPW RTA+N LDTKYP                                                      YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV+FLSDKYHDS  MTA+RR+F LAG+  R+ +P    I IDF  +  R
Sbjct:    5 ASCRKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNAENKIVGIGYNGMPNGCSDDVLPWTRTAENRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFLSDKYHDSTEMTAARRMFDLAGIVYREFKPKCNKIIIDFDSINSR 173          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A3P9ADY7_ESOLU (CMP/dCMP-type deaminase domain-containing protein n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P9ADY7_ESOLU)

HSP 1 Score: 240 bits (612), Expect = 4.390e-75
Identity = 117/232 (50.43%), Postives = 147/232 (63.36%), Query Frame = 1
Query:  247 TKRPRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
            T +   + ++++AP  KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC DD LPW+R AD+ LDTKYP                                                      YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV++LSDKYHD+  MTASRRL  LAG+  +Q +P R  I IDF+ +
Sbjct:    9 TSQVNGTSASSSAPTKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSRYADDRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIYLSDKYHDTTEMTASRRLLNLAGIEYKQFKPKRNKIVIDFNSI 186          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7N6ALS8_ANATE (dCMP deaminase n=2 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6ALS8_ANATE)

HSP 1 Score: 239 bits (611), Expect = 4.450e-75
Identity = 117/216 (54.17%), Postives = 140/216 (64.81%), Query Frame = 1
Query:  295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
            KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC+DD LPW+R+ADN LDTKYP                                                      YVCHAE+NAI+NKNSADV+GC +YVALFPCNECAKLIIQ+GI+EVV+LSDKYHD+L MTASR L  +AG++CRQ  P R  I IDF+ +
Sbjct:   19 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWSRSADNRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCIMYVALFPCNECAKLIIQAGIKEVVYLSDKYHDTLEMTASRTLLNMAGIQCRQFTPKRTKIVIDFNSI 180          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A484DM73_PERFV (CMP/dCMP-type deaminase domain-containing protein n=9 Tax=Percomorphaceae TaxID=1489872 RepID=A0A484DM73_PERFV)

HSP 1 Score: 239 bits (610), Expect = 6.300e-75
Identity = 118/216 (54.63%), Postives = 140/216 (64.81%), Query Frame = 1
Query:  295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
            KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC DD LPW+R+ADN+LDTKYP                                                      YVCHAEMNAI+NKNSADV+GC +YVALFPCNECAKLIIQSGI+EVV+LSDKYHD+  M ASRRL G+AG++ RQ +P R  I IDF+ +
Sbjct:   19 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWSRSADNQLDTKYP------------------------------------------------------YVCHAEMNAIMNKNSADVKGCTMYVALFPCNECAKLIIQSGIKEVVYLSDKYHDTPEMAASRRLLGMAGIQNRQFKPKRTEIVIDFNSI 180          
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7L1X8M3_9AVES (DCTD deaminase (Fragment) n=2 Tax=Archosauria TaxID=8492 RepID=A0A7L1X8M3_9AVES)

HSP 1 Score: 238 bits (607), Expect = 1.200e-74
Identity = 116/222 (52.25%), Postives = 141/222 (63.51%), Query Frame = 1
Query:  286 PVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
            P  KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN++ +IVGIGYNG P GCSDD LPW RTA+N LDTKYP                                                      YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV+F+SDKYHD+  MTA+RR+F LAG+  R+ +P    I IDF  +  R
Sbjct:    6 PCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTAENRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIVYREFKPKCNKIIIDFDSINSR 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR7_ECTSI3.740e-8463.43CMP/dCMP-type deaminase domain-containing protein ... [more]
A7SGH8_NEMVE8.230e-8053.63Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A835YZN4_9STRA2.660e-7857.08Deoxycytidylate deaminase n=1 Tax=Tribonema minus ... [more]
UPI000A2A6C224.060e-7650.60deoxycytidylate deaminase n=1 Tax=Exaiptasia diaph... [more]
A0A3B3Z903_9GOBI2.540e-7553.15dCMP deaminase n=1 Tax=Periophthalmus magnuspinnat... [more]
A0A7L4MV06_9AVES2.980e-7553.36DCTD deaminase (Fragment) n=1 Tax=Ceyx cyanopectus... [more]
A0A3P9ADY7_ESOLU4.390e-7550.43CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7N6ALS8_ANATE4.450e-7554.17dCMP deaminase n=2 Tax=Anabas testudineus TaxID=64... [more]
A0A484DM73_PERFV6.300e-7554.63CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7L1X8M3_9AVES1.200e-7452.25DCTD deaminase (Fragment) n=2 Tax=Archosauria TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1878contigP-wetherbeei_contig1878:3045..4168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJR7
Preferred nameDCTD
PFAMsdCMP_cyt_deam_1
Model size1124
Max annot lvl2759|Eukaryota
KEGG rclassRC00074
KEGG koko:K01493
KEGG ReactionR01663
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00429
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004132,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046078,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue4.7e-86
EggNOG OGsCOG2131@1|root,KOG3127@2759|Eukaryota
Ec32 ortholog descriptionDeoxycytidylate deaminase-related
Ec32 orthologEc-12_003010.1
EC3.5.4.12
DescriptiondCMP deaminase activity
Cds size867
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko02044
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186155.222568-UTR-P-wetherbeei_contig1878:3044..31311683186155.222568-UTR-P-wetherbeei_contig1878:3044..3131Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1878 3045..3131 +
1683186155.2498798-UTR-P-wetherbeei_contig1878:3998..41681683186155.2498798-UTR-P-wetherbeei_contig1878:3998..4168Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1878 3999..4168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186155.2330651-CDS-P-wetherbeei_contig1878:3131..39981683186155.2330651-CDS-P-wetherbeei_contig1878:3131..3998Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1878 3132..3998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1878.3.1prot_P-wetherbeei_contig1878.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1878 3132..3998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1878.3.1

>prot_P-wetherbeei_contig1878.3.1 ID=prot_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MPPPADDGAACDACACSSSQELADAYSTRSSANLPLSPGDVEEIGAVSKG
GLSTKRPRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVG
ACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRF
PKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCH
AEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHD
SLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR*
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mRNA from alignment at P-wetherbeei_contig1878:3045..4168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1878.3.1 ID=mRNA_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1124bp|location=Sequence derived from alignment at P-wetherbeei_contig1878:3045..4168+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCGGCGCTCGTCCTCCTCGCCTCTGCTCCCACAAGTCGCTCGGCAGC CTTTCTTTCTCGCTCACAGTCTCGAGGGAAAGCATCGATGCCTCCACCGG CAGACGACGGCGCTGCATGCGACGCTTGTGCGTGCAGCTCGAGCCAGGAA CTAGCAGATGCTTACAGCACCCGCAGCAGCGCGAACCTGCCGCTTTCGCC AGGCGATGTGGAAGAGATTGGCGCTGTCTCCAAGGGAGGTCTAAGCACAA AGCGCCCGCGTTCCAGTGAATCAACAACGGCAGCGCCGGTAGGGAAGAGA ACAGACTACGTTTCATGGGACGACTACTTCATGTCGGTTGCGTATCTGAG CGCGATGCGCTCGAAGGATCCGTCGACGCAGGTTGGCGCCTGCATCGTCA ACGCCGACAAACGCATCGTTGGCATTGGCTACAACGGGTTCCCAATGGGC TGCAGCGACGACGCATTGCCGTGGGCGCGGACCGCGGACAACGAGCTAGA TACCAAATACCCGGTGAATTGCAAAGAACAGCGTTTTCCGAAAACGATCG AACTATATTATCTCTTTCCCCTTCTTTCTCTCAGTTGTTGGCCATGCCTT TCCCTCACGTCCTCGAGCTTATTCTCTTGGTTCTTTTCGTCACTTTCGCA CATCGCGTCCCTCCCTTTTCTCCAGTACGTCTGCCACGCAGAGATGAATG CCATCCTCAACAAGAACTCCGCCGACGTCCGCGGCTGCGCCATCTACGTG GCGCTCTTCCCGTGCAACGAGTGCGCCAAGCTTATCATCCAGAGCGGCAT CCGGGAGGTTGTGTTTTTGTCCGACAAGTACCACGACTCGCTGTCCATGA CGGCCAGCCGCCGCCTGTTCGGTCTCGCCGGCGTTCGCTGCCGCCAGCAC CGCCCGGCCCGGCAGACCATTACGATCGACTTCAGCAAGGTCGGAGGAAG ATAATGAGGTTCGGGGGTCACGTACAAGGGGGAAAGAGAAAGAGTAGACT GCCTCGCGATGGCTTTCCGTGAAGCCAGCGCCGATGAAAGGAAAGAAACC TTTCCTTTTGCTAGAGCTGTTTCGTCTGGGCTGTCCCAGCACGGTCGTTC GATTAATGCATCATTTATGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1878:3045..4168+

>mRNA_P-wetherbeei_contig1878.3.1 ID=mRNA_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig1878:3045..4168+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCCACCGGCAGACGACGGCGCTGCATGCGACGCTTGTGCGTGCAG
CTCGAGCCAGGAACTAGCAGATGCTTACAGCACCCGCAGCAGCGCGAACC
TGCCGCTTTCGCCAGGCGATGTGGAAGAGATTGGCGCTGTCTCCAAGGGA
GGTCTAAGCACAAAGCGCCCGCGTTCCAGTGAATCAACAACGGCAGCGCC
GGTAGGGAAGAGAACAGACTACGTTTCATGGGACGACTACTTCATGTCGG
TTGCGTATCTGAGCGCGATGCGCTCGAAGGATCCGTCGACGCAGGTTGGC
GCCTGCATCGTCAACGCCGACAAACGCATCGTTGGCATTGGCTACAACGG
GTTCCCAATGGGCTGCAGCGACGACGCATTGCCGTGGGCGCGGACCGCGG
ACAACGAGCTAGATACCAAATACCCGGTGAATTGCAAAGAACAGCGTTTT
CCGAAAACGATCGAACTATATTATCTCTTTCCCCTTCTTTCTCTCAGTTG
TTGGCCATGCCTTTCCCTCACGTCCTCGAGCTTATTCTCTTGGTTCTTTT
CGTCACTTTCGCACATCGCGTCCCTCCCTTTTCTCCAGTACGTCTGCCAC
GCAGAGATGAATGCCATCCTCAACAAGAACTCCGCCGACGTCCGCGGCTG
CGCCATCTACGTGGCGCTCTTCCCGTGCAACGAGTGCGCCAAGCTTATCA
TCCAGAGCGGCATCCGGGAGGTTGTGTTTTTGTCCGACAAGTACCACGAC
TCGCTGTCCATGACGGCCAGCCGCCGCCTGTTCGGTCTCGCCGGCGTTCG
CTGCCGCCAGCACCGCCCGGCCCGGCAGACCATTACGATCGACTTCAGCA
AGGTCGGAGGAAGATAA
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