mRNA_P-wetherbeei_contig18734.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A7X1P5S5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P5S5_9PROT) HSP 1 Score: 183 bits (465), Expect = 6.450e-55 Identity = 79/128 (61.72%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 EANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFRLMRDVGDKPATDTPWLYIVHTDIPDDIVRQ 384
+ANGLITV LH PE ++EFN WYNLEH+ Q+ ALPGFV RRY A +YLAWY+ D+ VE GP+FQ +V++PTPWSLR+R YG++RERMNFRLM +VG P D PW+YIVHTDIP+ IV++
Sbjct: 3 QANGLITVRLHTAPEHEDEFNDWYNLEHVPQLTALPGFVRTRRYYCAAADIRYLAWYETKDDSVEGGPYFQGIVSNPTPWSLRIRKHYGENRERMNFRLMCEVGTAPQPDAPWMYIVHTDIPEHIVKE 130
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A3N5WEP4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WEP4_9PROT) HSP 1 Score: 175 bits (444), Expect = 1.020e-51 Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 EANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFRLMRDVGDKPATDTPWLYIVHTDIPDDIV 378
+A GLITV L V PE + EFN WY LEH+ Q+ ALPGFV RRY + A +YLAWY+ DE +E FQ +VAHPTPWSLR+R YG +RERMNFRLM +VG P D PW+YIVHTDIPDDI+
Sbjct: 4 QAGGLITVRLDVVPEHEAEFNDWYTLEHVPQLTALPGFVRTRRYCCDSADIRYLAWYETADETIEAAKDFQYIVAHPTPWSLRMRKLYGANRERMNFRLMCEVGQVPLPDAPWMYIVHTDIPDDII 129
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A7V3BKD5_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3BKD5_9BACT) HSP 1 Score: 158 bits (400), Expect = 2.530e-45 Identity = 68/119 (57.14%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 10 GLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFRLMRDVGDKPATDTPWLYIVHTDIP 366
GL+ VWLHV PE ++EFNAWYN EHI QI +PGF++GRRYM + PKYLA Y+ DE + G FQ V+A+PTPWS R+R FY D R R +RL+ +G PATD P++YIV DIP
Sbjct: 8 GLLAVWLHVAPEHEDEFNAWYNTEHIQQITGIPGFINGRRYMALEGVPKYLALYELHDETITAGREFQHVMANPTPWSARMRGFYQDHRIRNTYRLIFTIGQAPATDAPYVYIVRMDIP 126
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A5N7RL66_9BURK (Uncharacterized protein n=1 Tax=Alcaligenaceae bacterium SAGV5 TaxID=2558245 RepID=A0A5N7RL66_9BURK) HSP 1 Score: 139 bits (350), Expect = 9.690e-38 Identity = 62/96 (64.58%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 1 EANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMN 288
+A GLI VWLHVPP R+EEF+AWY LEHI Q+V L GFVSGRRY E A PK+LA Y+ DE VE P FQ VV HPTPWS R+ +F+G DR R N
Sbjct: 2 QATGLIAVWLHVPPHREEEFHAWYELEHIPQVVGLEGFVSGRRYYCEQAFPKFLALYETQDESVEDSPGFQHVVTHPTPWSGRIWTFFGKDRIRQN 97
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: UPI00067D3120 (hypothetical protein n=1 Tax=Herbaspirillum autotrophicum TaxID=180195 RepID=UPI00067D3120) HSP 1 Score: 139 bits (349), Expect = 1.130e-37 Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 1
Query: 4 ANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFRLMRDVGDKPATDTPWLYIVHTDIPDDIVRQRAFAAAGNGAGRSARAAICC 444
ANG+I VWLHV R+EEFNAWY +EH+ ++ A+ G SGRRY PKYL +Y+ DE+VEPGP FQ +++H TPWS R++ FYG++R R N+R + G PAT L+ + + + R A A + A+ C
Sbjct: 5 ANGMIAVWLHVAESREEEFNAWYEMEHVAEVCAIDGVASGRRYFSAARLPKYLVFYETRDEQVEPGPGFQRLLSHQTPWSCRMQEFYGENRVRRNYRRLFAQGAFPATHEGSLFTLTAQVSGSVDTARVTAGAADALNVPGCVAVRC 151
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A3G8GKQ5_9BURK (Uncharacterized protein n=4 Tax=Pigmentiphaga TaxID=152267 RepID=A0A3G8GKQ5_9BURK) HSP 1 Score: 136 bits (342), Expect = 1.580e-36 Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 EANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFRLMRDV 309
+A GLI VWLHVPP R+EEF+AWY LEHI Q+V L GFVSGRRY + PK+LA Y+ DE VE P FQ VV HPTPWS R+ +F+G DR R N + V
Sbjct: 2 QATGLIAVWLHVPPHREEEFHAWYELEHIPQVVGLDGFVSGRRYYCDQVFPKFLALYETRDESVEDSPGFQHVVTHPTPWSGRIWTFFGKDRIRQNLVRLASV 104
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A1E3ZL92_9BORD (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3ZL92_9BORD) HSP 1 Score: 134 bits (337), Expect = 8.870e-36 Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1 EANGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMN 288
+A GLI VWLHVPP R+EEF+AWY LEHI Q+V L GFVSGRRY A PK+LA Y+ DE VE P FQ VV HPTPWS R+ +F+G DR R N
Sbjct: 2 QATGLIAVWLHVPPHREEEFHAWYELEHIPQVVGLDGFVSGRRYDGGQAFPKFLALYETRDESVEDSPGFQHVVTHPTPWSGRIWTFFGKDRIRQN 97
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: UPI001676A161 (antibiotic biosynthesis monooxygenase n=1 Tax=Pigmentiphaga litoralis TaxID=516702 RepID=UPI001676A161) HSP 1 Score: 130 bits (328), Expect = 3.700e-34 Identity = 59/95 (62.11%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 10 GLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFR 294
G+I VWLHV PER+EEFNAWY EHI QIV L GFVSG RY ++A PK+LA Y+ DE VE P FQ V HP+PWS R+ SF+G DR R+N R
Sbjct: 31 GMIAVWLHVAPEREEEFNAWYEREHIPQIVDLDGFVSGTRYYSDEAFPKFLALYETVDESVEASPGFQHVTTHPSPWSGRIWSFFGKDRIRLNLR 125
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A7Y9LN61_9BURK (Quinol monooxygenase YgiN n=1 Tax=Pigmentiphaga litoralis TaxID=516702 RepID=A0A7Y9LN61_9BURK) HSP 1 Score: 131 bits (330), Expect = 3.900e-34 Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 7 NGLITVWLHVPPERDEEFNAWYNLEHINQIVALPGFVSGRRYMVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERMNFR 294
+G+I VWLHV PER+EEFNAWY EHI QIV L GFVSG RY ++A PK+LA Y+ DE VE P FQ V HP+PWS R+ SF+G DR R+N R
Sbjct: 60 SGMIAVWLHVAPEREEEFNAWYEREHIPQIVDLDGFVSGTRYFSDEAFPKFLALYETVDESVEASPGFQHVTTHPSPWSGRIWSFFGKDRIRLNLR 155
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Match: A0A1W2BNT0_9BURK (Uncharacterized protein n=2 Tax=Polynucleobacter TaxID=44013 RepID=A0A1W2BNT0_9BURK) HSP 1 Score: 110 bits (274), Expect = 9.210e-27 Identity = 53/71 (74.65%), Postives = 58/71 (81.69%), Query Frame = 2
Query: 380 DNEHLPRLVTVPGVVRARRYAAVEGNPKYLTAYELTDKDAFESPAGLQARKTPWTAKMRSLFFNTRRSMCK 592
D EHLPRLVTVPGV RARR+ +P+YLTAY L D +AFESP GL ARKTPWTAKMRSLFFNTRR+M K
Sbjct: 110 DEEHLPRLVTVPGVNRARRFICTGQSPRYLTAYSLDDPNAFESPEGLIARKTPWTAKMRSLFFNTRRTMAK 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18734.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18734.1.1 >prot_P-wetherbeei_contig18734.1.1 ID=prot_P-wetherbeei_contig18734.1.1|Name=mRNA_P-wetherbeei_contig18734.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp MVEDAKPKYLAWYDADDEKVEPGPHFQEVVAHPTPWSLRVRSFYGDDRERback to top mRNA from alignment at P-wetherbeei_contig18734:250..868+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18734.1.1 ID=mRNA_P-wetherbeei_contig18734.1.1|Name=mRNA_P-wetherbeei_contig18734.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=619bp|location=Sequence derived from alignment at P-wetherbeei_contig18734:250..868+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18734:250..868+ >mRNA_P-wetherbeei_contig18734.1.1 ID=mRNA_P-wetherbeei_contig18734.1.1|Name=mRNA_P-wetherbeei_contig18734.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig18734:250..868+ (Phaeothamnion wetherbeei SAG_119_79)back to top |