mRNA_P-wetherbeei_contig1872.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1872.1.1
Unique NamemRNA_P-wetherbeei_contig1872.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.710e-23
Identity = 75/226 (33.19%), Postives = 101/226 (44.69%), Query Frame = 3 
Query:   84 GDWPALGAALTALVVVGPVARFLLFYLHWHCVCLAFAELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIYDPVGT--ALRPLGGDGGGSNASDKIGTGKIGIGHSSGGGXXXXXXXXXXXXXXXXXXXKDGAGSGAGVRSSGDGSSNEGGRWRAVAAMLATFLVSSLLHELVLWCTLRRLV-PVCTGNLVFGGITISIWRRVFPPLDQKPEGADAAGT 752
            G   ALG  L  L VV     F++FY  WHC+CL  AEL G+PDR++YG WW+  D+P  F R+WS PVH WL   ++ P+    +    G DG  S  S ++ T                                      A    +GD S     +W  V A+LATF+VS + HE V++  +R    P  T  L  GG+ +  W  VFP  D KP      G+
Sbjct:  293 GQLVALGCFLWMLFVVSSALHFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSAELST--------------------------------------ATAEVAGDPS-----KWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDLKPSSESEGGS 475
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BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Match: A0A836CLB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.610e-12
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 3 
Query:  144 RFLLFYLHWHCVCLAFAELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIYDPV 326
            R + FY  WHC   A A L+G PD ++YGPWW+  D P  FFR WSRPVHVW+R  +  P+
Sbjct:  186 RAVAFYGFWHCCGCALAYLSGEPDFNLYGPWWLVRDHPAPFFRHWSRPVHVWMRRCVCAPL 246
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BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Match: A0A512UGP0_9ASCO (O-acyltransferase n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UGP0_9ASCO)

HSP 1 Score: 70.5 bits (171), Expect = 2.620e-9
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 3 
Query:  156 FYLHWHCVCLAFAELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIYDPVGTAL 338
            FYL W  +  A AEL+G+ DRD YGPWW C D    F R W++PVHV+L   +Y    +AL
Sbjct:  437 FYLIWDVILSAIAELSGFADRDFYGPWWSCTDW-SQFSRYWNKPVHVFLHRHVYHSSISAL 496
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BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Match: A0A427Y4E1_9TREE (O-acyltransferase n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427Y4E1_9TREE)

HSP 1 Score: 61.2 bits (147), Expect = 2.290e-6
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 3 
Query:  150 LLFYLHWHCVCLAFAELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIY 317
            L+FY+ + C+C AFAEL+ + DR++YG WW        F R W++PVHV+L   +Y
Sbjct:  445 LIFYIIFECICPAFAELSCFADRELYGDWWNSTSWD-EFSRKWNKPVHVFLLRHVY 499
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BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Match: A0A293LIU1_ORNER (Sterol O-acyltransferase (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LIU1_ORNER)

HSP 1 Score: 55.8 bits (133), Expect = 9.450e-5
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 3 
Query:   87 DWPALGAALT--ALVVVGPVARFLLFYLHWHCVCLAFAELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIY 317
            D+  LG  LT  A++++G V+ FL+FY   HC    FAE+  + DR  Y  WW      G ++R W+  VH WL   IY
Sbjct:  228 DFQLLGFTLTGCAILILGSVSMFLVFYGFLHCWLNLFAEVLRFGDRLFYLDWWNSTSY-GDYYRSWNLVVHDWLFSYIY 305
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1872.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUK9_ECTSI1.710e-2333.19Sterol or diacylglycerol O-acyltransferase, partia... [more]
A0A836CLB1_9STRA2.610e-1252.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A512UGP0_9ASCO2.620e-949.18O-acyltransferase n=1 Tax=Metschnikowia sp. JCM 33... [more]
A0A427Y4E1_9TREE2.290e-644.64O-acyltransferase n=1 Tax=Apiotrichum porosum TaxI... [more]
A0A293LIU1_ORNER9.450e-539.24Sterol O-acyltransferase (Fragment) n=1 Tax=Ornith... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1872contigP-wetherbeei_contig1872:36..1871 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5480.G8BJQ2
Preferred nameARE2
PFAMsMBOAT
Model size1346
Max annot lvl4751|Fungi
KEGG rclassRC00004,RC00055
KEGG koko:K00637
KEGG ReactionR01461
KEGG Pathwayko00100,ko04979,map00100,map04979
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004772,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008374,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016740,GO:0016746,GO:0016747,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0034737,GO:0034738,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0071704,GO:0097384,GO:0098827,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
Exons2
Evalue8.08e-09
EggNOG OGsCOG5056@1|root,KOG0380@2759|Eukaryota,38CTZ@33154|Opisthokonta,3NXII@4751|Fungi,3QMWQ@4890|Ascomycota,3RSHI@4891|Saccharomycetes,47BT6@766764|Debaryomycetaceae
EC2.3.1.26
DescriptionO-acyltransferase
Cds size1107
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186153.75906-UTR-P-wetherbeei_contig1872:35..761683186153.75906-UTR-P-wetherbeei_contig1872:35..76Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1872 36..76 +
1683186153.791071-UTR-P-wetherbeei_contig1872:1673..18711683186153.791071-UTR-P-wetherbeei_contig1872:1673..1871Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1872 1674..1871 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186153.7735991-CDS-P-wetherbeei_contig1872:76..2531683186153.7735991-CDS-P-wetherbeei_contig1872:76..253Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1872 77..253 +
1683186153.7818174-CDS-P-wetherbeei_contig1872:743..16731683186153.7818174-CDS-P-wetherbeei_contig1872:743..1673Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1872 744..1673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1872.1.1prot_P-wetherbeei_contig1872.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1872 77..1673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1872.1.1

>prot_P-wetherbeei_contig1872.1.1 ID=prot_P-wetherbeei_contig1872.1.1|Name=mRNA_P-wetherbeei_contig1872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=369bp
MAPVLRAFAAAFACGDWPALGAALTALVVVGPVARFLLFYLHWHCVCLAF
AELTGYPDRDMYGPWWVCVDDPGHFFRLWSRPVHVWLRDEIYDPVGTALR
PLGGDGGGSNASDKIGTGKIGIGHSSGGGGGGSAGSVGNGGDGGGGGGKD
GAGSGAGVRSSGDGSSNEGGRWRAVAAMLATFLVSSLLHELVLWCTLRRL
VPVCTGNLVFGGITISIWRRVFPPLDQKPEGADAAGTAKSGGAKTARGAV
DRGAAVDDGTAVDSSNSATDAVGKGAPLRRRNGGEPDRTGCGGAPAGKAA
AVDKAGKSAAAAAVAAAVTTEDEWRRSGCGRRGLFAKRLFLFLTSIGETW
FCVVLWSVWLSIKEDFQA*
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mRNA from alignment at P-wetherbeei_contig1872:36..1871+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1872.1.1 ID=mRNA_P-wetherbeei_contig1872.1.1|Name=mRNA_P-wetherbeei_contig1872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1836bp|location=Sequence derived from alignment at P-wetherbeei_contig1872:36..1871+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTCATCGGAGTTGCCACACATGTGTTTTTGCACGCCGTCATGGCGCCG
GTCCTGCGGGCTTTCGCCGCGGCTTTCGCGTGCGGCGACTGGCCGGCGCT
GGGGGCGGCGCTGACGGCGCTGGTGGTGGTTGGTCCGGTGGCTCGGTTCC
TGCTGTTCTACCTGCACTGGCACTGCGTCTGCCTGGCATTTGCCGAGCTA
ACGGGATATCCTGACCGGGTGAGAAAGGGGAAAGAGTGAAAGGGTTCTGC
AATCTATGTGTTTCCTGAGCCTTCTCTCCCGTTTTCTTGTTGTTGGATGG
GATGAGGGAGGAGAGGAGACTTTGACCTGCTCGCGTAGCGTTCTGCCGCC
TCGCCACCTTTCTTTCTCTATTCTGGCTGCGGGCAGAGAGCACGCTTCGT
TCTTCATTTCTTTTTGAAAAAAGGCTGTAGTCACTCGGTAGCATATGAAA
TCACTTTGTAGGATTGCGTTTTTCCAGCCGATTGTTTCTGGACGCCAGCA
TTATCTTGATAATATATCAGGGAATGCGCGGTTTAAAGCGTGCGGAGAAA
AGGCGGATTCTAACAGGCTCCGGTGCTGTCCGCCTCACTCTGGGCTGTTC
TCTCAAACATCTTTCTGCTATTTCCTCCCATTTCTCCGCTTGGACTCTGG
TTGACCACGCAACGCTGGTCCTATGGCGTATTGCGGCTGCGGCGGATGGC
TGCCGCAGGACATGTACGGGCCGTGGTGGGTGTGCGTCGACGACCCGGGC
CACTTCTTCCGGCTCTGGTCGCGGCCCGTGCATGTCTGGCTGCGCGATGA
GATCTATGATCCCGTCGGGACGGCGTTGCGGCCGCTTGGAGGAGACGGTG
GCGGCAGCAACGCCAGCGACAAGATCGGCACTGGCAAAATCGGCATTGGC
CATAGCAGTGGCGGCGGTGGCGGCGGCAGCGCTGGCAGCGTGGGCAACGG
CGGCGACGGCGGCGGCGGCGGCGGCAAGGACGGTGCTGGCAGCGGTGCCG
GTGTCCGAAGCAGCGGCGACGGCAGCAGCAATGAAGGCGGCCGCTGGCGA
GCCGTCGCGGCCATGCTTGCGACGTTCCTGGTATCTTCGCTGCTGCACGA
GCTCGTCCTGTGGTGCACCCTCCGCCGGCTGGTACCCGTCTGCACGGGCA
ATCTCGTCTTTGGCGGGATCACCATCTCTATCTGGCGGCGAGTCTTCCCT
CCGCTAGACCAAAAACCCGAGGGAGCTGATGCCGCCGGCACGGCGAAATC
CGGCGGGGCGAAAACCGCGCGTGGCGCGGTGGACCGCGGCGCCGCGGTAG
ATGACGGCACCGCAGTAGACAGCAGCAACAGCGCCACAGACGCGGTGGGG
AAGGGCGCTCCGTTGCGGCGCAGGAATGGTGGCGAGCCCGACCGCACAGG
CTGCGGAGGAGCGCCGGCGGGCAAAGCCGCGGCGGTTGATAAAGCTGGCA
AAAGCGCCGCCGCGGCGGCTGTGGCGGCGGCGGTGACGACGGAGGATGAA
TGGCGCCGCTCCGGGTGCGGGCGGCGAGGCTTGTTTGCAAAGCGCCTCTT
CCTCTTCCTGACGTCCATCGGTGAGACGTGGTTTTGCGTGGTGCTGTGGT
CCGTCTGGCTGTCCATCAAGGAAGACTTTCAGGCGTAGAGAGAAGAAGGA
AGTCGGGGGTCTGGATTCAATGACGGTAGTTAATAGGTGCTGACAGTAGC
ACCGATGTTGTTGGGAGCACGCATTGGTAGAAAGAGGGAAATTGGTGCAA
AGGGAGGTTTTGCGCAGGAGGAAAAGTACCCATGAGAGCGGGTTGTGGCA
GGAAAGGGTACGGGACTGACGTCACACATCACAAGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1872:36..1871+

>mRNA_P-wetherbeei_contig1872.1.1 ID=mRNA_P-wetherbeei_contig1872.1.1|Name=mRNA_P-wetherbeei_contig1872.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1107bp|location=Sequence derived from alignment at P-wetherbeei_contig1872:36..1871+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCCGGTCCTGCGGGCTTTCGCCGCGGCTTTCGCGTGCGGCGACTG
GCCGGCGCTGGGGGCGGCGCTGACGGCGCTGGTGGTGGTTGGTCCGGTGG
CTCGGTTCCTGCTGTTCTACCTGCACTGGCACTGCGTCTGCCTGGCATTT
GCCGAGCTAACGGGATATCCTGACCGGGACATGTACGGGCCGTGGTGGGT
GTGCGTCGACGACCCGGGCCACTTCTTCCGGCTCTGGTCGCGGCCCGTGC
ATGTCTGGCTGCGCGATGAGATCTATGATCCCGTCGGGACGGCGTTGCGG
CCGCTTGGAGGAGACGGTGGCGGCAGCAACGCCAGCGACAAGATCGGCAC
TGGCAAAATCGGCATTGGCCATAGCAGTGGCGGCGGTGGCGGCGGCAGCG
CTGGCAGCGTGGGCAACGGCGGCGACGGCGGCGGCGGCGGCGGCAAGGAC
GGTGCTGGCAGCGGTGCCGGTGTCCGAAGCAGCGGCGACGGCAGCAGCAA
TGAAGGCGGCCGCTGGCGAGCCGTCGCGGCCATGCTTGCGACGTTCCTGG
TATCTTCGCTGCTGCACGAGCTCGTCCTGTGGTGCACCCTCCGCCGGCTG
GTACCCGTCTGCACGGGCAATCTCGTCTTTGGCGGGATCACCATCTCTAT
CTGGCGGCGAGTCTTCCCTCCGCTAGACCAAAAACCCGAGGGAGCTGATG
CCGCCGGCACGGCGAAATCCGGCGGGGCGAAAACCGCGCGTGGCGCGGTG
GACCGCGGCGCCGCGGTAGATGACGGCACCGCAGTAGACAGCAGCAACAG
CGCCACAGACGCGGTGGGGAAGGGCGCTCCGTTGCGGCGCAGGAATGGTG
GCGAGCCCGACCGCACAGGCTGCGGAGGAGCGCCGGCGGGCAAAGCCGCG
GCGGTTGATAAAGCTGGCAAAAGCGCCGCCGCGGCGGCTGTGGCGGCGGC
GGTGACGACGGAGGATGAATGGCGCCGCTCCGGGTGCGGGCGGCGAGGCT
TGTTTGCAAAGCGCCTCTTCCTCTTCCTGACGTCCATCGGTGAGACGTGG
TTTTGCGTGGTGCTGTGGTCCGTCTGGCTGTCCATCAAGGAAGACTTTCA
GGCGTAG
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