mRNA_P-wetherbeei_contig187.2.8 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig187.2.8
Unique NamemRNA_P-wetherbeei_contig187.2.8
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE)

HSP 1 Score: 586 bits (1510), Expect = 1.830e-197
Identity = 312/446 (69.96%), Postives = 358/446 (80.27%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAAS----LRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            DIRIA +GNVDSGKSTLIGVL ++ LDDGRG ARS++L+HRHEQENGRTSAVTMEIM  +   +   P  RS        H+QRWAEVV +S  ++TLIDLCGHEKYLKTTVFGLTGL+PDFCLLVVGANMGVQRMTKEHISIACALQIPIAV +TKVDICP TVLKQTRQ LAK+LR+N K+PYPI+D   VDAAAES+A DR+TPVFAVSNVTG GL LLRA     F AR +   +            + P +  PI    +VRGVGIVVGGTMLRG VTVNQ LLIGPDRAG+F+ V+VRSIECKRQ V+E  EGQSATFAVRSL+RRV LRRSTFRKGMVA+D  D P+ATREFEADVVILHHSTTVA  YQPV+HCGVVRQ+A+I+ + G  S    LRTGQTA V FRF+Y++E+++ GSTFLFREGRAKGIGK++RV+
Sbjct:  105 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARS--------HLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKD---VDAAAESIASDRITPVFAVSNVTGMGLPLLRA-----FVARLRRNKSRNDDPSMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGHDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 534          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA)

HSP 1 Score: 541 bits (1394), Expect = 1.030e-179
Identity = 281/443 (63.43%), Postives = 345/443 (77.88%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVT-LRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            ++R+A +GNVDSGKSTLIGVL +ASLDDGRGLARSV+L+HRHEQENGRTSAV++E+M         G     + +  +R H QRW E+V+NS   ++LIDLCGHE+YLKTTVFGLTG++PDF LLVVGANMGVQRMT+EHISIACALQ+PIAV +TKVDICP  VLKQTRQ LAK+LR N K+PYP++   QVDAAA++VA DR+TPVFA+S+VTGQGL+LL+A     F AR +  +    A   +    + P +  PI    +V GVGIV GGT+ RG V VNQ LL+GPDR G ++PV+VRSIE KRQ V E   G SATFA+R++ R+   L+RSTFRKGMV +  +D P+A R+FEA VVILHHSTT+++ YQPVVHCGVVRQSAS+V I G  SLRTGQ A V FRFLYFAE++LPG+TFLFREGRAKGIGK+ R++
Sbjct:   40 EVRVAMIGNVDSGKSTLIGVLTSASLDDGRGLARSVMLRHRHEQENGRTSAVSVELM---------GYRDGEQVVPQARHHHQRWTEIVENSDRAISLIDLCGHERYLKTTVFGLTGMMPDFALLVVGANMGVQRMTREHISIACALQLPIAVVVTKVDICPQPVLKQTRQDLAKYLRSNRKMPYPVKQLDQVDAAADAVASDRITPVFAISSVTGQGLELLKA-----FLARLRRNSRNFIAEAEQVAPGSMPGIHFPIDGVYEVHGVGIVAGGTLTRGHVKVNQTLLLGPDRTGSYIPVTVRSIESKRQGVSEATPGISATFAIRAIGRKTEGLKRSTFRKGMVLLGEKDEPRAVRQFEATVVILHHSTTISEGYQPVVHCGVVRQSASMVAIHGTESLRTGQRAQVHFRFLYFAEYVLPGATFLFREGRAKGIGKITRLI 468          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A836C8C3_9STRA (Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C3_9STRA)

HSP 1 Score: 535 bits (1377), Expect = 3.960e-179
Identity = 276/434 (63.59%), Postives = 336/434 (77.42%), Query Frame = 2
Query:  644 VGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGA--ASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKV 1939
            +GNVDSGKSTLIGVLCN   DDGRG ARS++LKHRHEQENGRTSAVT EIM  +       P  +       +SHV RWAEVVQNS   +TLIDLCGHE+YLKTTVFGLTGL+PD+C+LVVG+NMGVQ MTKEHISIACAL+IP+AV +TKVDICP  VLKQTRQTLAK+LR+N K+PYP++D +QV+ AA S+A DR+TPVFAVSNVTG GLDLLR   +     R K   +   AL         P +  PI    +V+GVG+V+GGT++RG VTVNQ L +GPDR+G+++PVSVRSIECKRQPV+EVG G SAT AVR++SRR  LRR  FRKGM+A+ A D+P++  EF+ADVV+LHH TT+   YQPV+HCGVVRQ+A+I  I+G   A+LRTG TA V  +F Y++E++  G+TFLFREGRAKGIGKV
Sbjct:    2 IGNVDSGKSTLIGVLCNRCTDDGRGSARSLVLKHRHEQENGRTSAVTTEIMGYTAEGDQVVPTSK-------KSHVARWAEVVQNSERNITLIDLCGHERYLKTTVFGLTGLMPDYCILVVGSNMGVQVMTKEHISIACALRIPLAVCVTKVDICPVPVLKQTRQTLAKYLRQNHKMPYPVKDEAQVETAASSIASDRITPVFAVSNVTGHGLDLLRLFVSK--LRRQKMELSQEIALDP----ATVPAVHFPIDGVYEVKGVGLVIGGTVMRGSVTVNQNLQVGPDRSGQYVPVSVRSIECKRQPVKEVGLGVSATLAVRAISRRPNLRRQHFRKGMLAIGANDLPRSCWEFQADVVVLHHQTTIGVGYQPVIHCGVVRQAAAITSIDGTTTANLRTGATASVVLKFQYYSEYMEIGTTFLFREGRAKGIGKV 422          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA)

HSP 1 Score: 536 bits (1380), Expect = 2.700e-177
Identity = 280/449 (62.36%), Postives = 343/449 (76.39%), Query Frame = 2
Query:  623 SDIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTT-LRFFARFKHAATPPAA---LFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQ--ATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            SD+R+A +GNVDSGKSTLIGVL +A LDDGRG ARS++LKHRHEQ+NGRTSAVT+E+M         G     + +A++R H QRWA+VV+ +  ++TLIDLCGHEKYLKTTVFGLTG+ PDFC++VVGANMGVQRMT+EHISIACAL IP+ V +TK+DI P  VLKQTR+TLAK LR   K+PYP+++SSQV+AAA+SVA DR+TPVFA+S+VTG GL LLR   + +R        A P  +   L  ++F         PI    +V+GVGIVVGGTM+RG V+VN  +L+GPDRAG +LPV+VRSIECKRQ    V  GQ+ATFA+RSLSRRV LRR+ FRKGM  +   D  +  A R+FEA VVILHHSTT+A  YQPV+HCG VRQ+A +V +EG  SLRTGQ  LVTFRFLYF E +LPGSTFLFREGRAKG+GKV R++
Sbjct:  149 SDVRVAMIGNVDSGKSTLIGVLTSAGLDDGRGSARSLVLKHRHEQDNGRTSAVTVEVM---------GYRDGEQVVATARQHSQRWAQVVKEADRSVTLIDLCGHEKYLKTTVFGLTGMCPDFCIVVVGANMGVQRMTREHISIACALSIPLVVCVTKIDIAPQPVLKQTRRTLAKFLRACGKMPYPVKESSQVEAAAQSVASDRITPVFAISSVTGLGLPLLREFVSKIRRSFNLYRPAVPAISGQDLPEKYF---------PIDGVYEVKGVGIVVGGTMIRGSVSVNDTMLLGPDRAGAWLPVTVRSIECKRQATENVKTGQAATFAIRSLSRRVALRRAFFRKGMALIGELDNERVKAVRDFEASVVILHHSTTIATGYQPVIHCGTVRQAAQLVSVEGGESLRTGQRDLVTFRFLYFTELILPGSTFLFREGRAKGLGKVTRLI 579          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A7S2BKI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKI3_9STRA)

HSP 1 Score: 534 bits (1375), Expect = 2.980e-177
Identity = 284/443 (64.11%), Postives = 339/443 (76.52%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRA-LTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            D+R+A +GNVDSGKSTLIGVL +A LDDGRGLARS++L+HRHEQENGRTSAVT+E+M         G     + +  +R H QRWAEVV  S   +TLIDLCGHEKYLKTTVFGLTG++PD  LLVVGANMGVQ MTKEH++IACALQ+PIAV +TKVDICP  +LKQTRQ++AK LR+N K+PYP++DSSQV+AAA++V  DRVTPVFA+S+VTG GL LL+  L  L    R   A T   A  S   +   P +  PI    +VRGVG+VVGGT+ RG V VNQ LL+GPDR G F+PV+VRSIE KRQ V EV  GQSATFA+R L RR  LRRS+FRKGMV V   D P A R FEA V+ILHHSTT+++ YQPVVHCGVVRQ+AS+  I G+ SLRTGQ A V FRF+Y+ EFLLPG+TFLFREGRAKGIGK+ + +
Sbjct:   83 DVRVAMIGNVDSGKSTLIGVLTSACLDDGRGLARSLVLRHRHEQENGRTSAVTVELM---------GYKDGEQVVPQARQHNQRWAEVVDQSDRAITLIDLCGHEKYLKTTVFGLTGMMPDLALLVVGANMGVQIMTKEHVAIACALQLPIAVVVTKVDICPQPILKQTRQSIAKCLRQNRKMPYPVKDSSQVEAAAQAVISDRVTPVFAISSVTGMGLKLLKDFLGKLSRNPRNFLAPTNQPADKSNIPL---PDIHFPIDGIYEVRGVGMVVGGTLTRGNVKVNQTLLLGPDRVGVFVPVTVRSIESKRQSVPEVHSGQSATFAIRVLGRRPALRRSSFRKGMVMVHEADKPMAVRHFEAAVIILHHSTTISEGYQPVVHCGVVRQAASMEAIHGSESLRTGQRAQVRFRFMYYGEFLLPGATFLFREGRAKGIGKITKTV 513          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK)

HSP 1 Score: 527 bits (1358), Expect = 2.000e-175
Identity = 283/444 (63.74%), Postives = 340/444 (76.58%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIA-SSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRA-LTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            D+R+A +GNVDSGKSTLIGVL N +LDDGRG ARS +LKHRHEQENGRTSAV++E+M         G N ++  +  + R  ++RWAEVV+NS  +LTLIDLCGHE+YLKTTVFGLTG+LPDF ++VVG NMGVQ MT+EHISIA AL IP+AVA+TKVDI P  VLKQTRQTLAK LR++ KLPYP+RD+ Q  AAA+S+  DRVTPVFA+SNVTGQGLDLLR  L+ LR   R K  A  P  +         P +  PI    +VRGVG+VVGGT+LRG V   Q L +GPDR G F+PV+VR+IE KRQ V E  EG SATFA+RSL+++VTLRR+ FRKGMVA+D  D P+A R FEA VVILHHSTTV+  YQPV+H GV+RQ+A++  I    +LRTGQ A V FRFLYFAE+LLPG+TFLFREGRAKG+GKV RV 
Sbjct:   56 DVRVAMIGNVDSGKSTLIGVLTNCTLDDGRGAARSSVLKHRHEQENGRTSAVSVEVM---------GYNEKNEQVVPTERQALKRWAEVVRNSERSLTLIDLCGHERYLKTTVFGLTGMLPDFTVVVVGGNMGVQLMTREHISIAAALAIPMAVAVTKVDIAPVPVLKQTRQTLAKFLRKHGKLPYPVRDADQAAAAADSICSDRVTPVFAISNVTGQGLDLLRLFLSKLR---RNKCKALDPELVDESLM----PRVHFPIDGVYEVRGVGLVVGGTLLRGGVREGQTLQVGPDRTGAFVPVTVRTIEVKRQSVPEAKEGMSATFAIRSLNKKVTLRRTFFRKGMVAIDGGDTPRAVRSFEASVVILHHSTTVSHGYQPVIHAGVIRQAAAMDQIFAEEALRTGQRAEVRFRFLYFAEYLLPGATFLFREGRAKGLGKVTRVF 483          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: W7TYD2_9STRA (Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYD2_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 9.920e-170
Identity = 275/445 (61.80%), Postives = 340/445 (76.40%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTT-LRFFAR-FKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAA-SLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRVM 1951
            D+R+A +GNVD+GKSTLIGVL NA LDDGRG ARS++LKHRHEQENGRTSAVT+E++          P GR+++         RW E+V++S  T+TLIDLCGHE+YLKTT+FGLTGLLPDF LL+VG+NMGV  MT+EHI+IACAL IP+AV +TK+DI P  VLKQTRQTLA++LR+N+KLPYPI+D +QV+AAA+S+A DRVTPVFA+S+VTGQG+DLLRA  + LR   R ++   T P    S       P +  P+    +V+GVG+VVGGT+LRG V  NQ LL+GPDR G FLP+SVRSIEC+RQPV+E   G S TFAVRSL+++VTLRRS FRKGMV V A D P+  R+F A VVILHHSTT++  Y+PV+H G VRQ+A +  I G   +LRTG  A V F F YFAEFL+ GSTFLFREGRAKGIGKV R++
Sbjct:   87 DVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQT--------HRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGS-----EAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A7S3K4J1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J1_9STRA)

HSP 1 Score: 484 bits (1245), Expect = 1.730e-157
Identity = 264/477 (55.35%), Postives = 330/477 (69.18%), Query Frame = 2
Query:  623 SDIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATP--------------PAALFSRFFICNQ----------PPLSPPISMRGK----------VRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVTLRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIE-GAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKVKRV 1948
            +DIR+A +GNVDSGKS+LIGVL N SLDDGRGLARS++LKH+HEQ NGRTSAVT+E+M         G     + + ++R H QRWAEVV  S  ++TLIDLCGHE+YLKTTVFGLT + PD+ LLVVGANMGVQRMTKEH++IACAL IPIAV ITK+D+CP  VLKQTRQTLA+ LR++ ++P P++D +QV  AAES+   R+ PVF+VSNV+G G+ LLR      F ++ + A  P              P    S   IC              L+P  S   K          VRGVG++VGGT+ RG ++VN  +L+GP+R GEF+PV VRSIECKRQP++E   G +AT A+RSL+RR  LRR   RKGMV +  +D P+ATR FEA V ILHHSTTVA+ Y+PVVH   VRQ+ +++ I  G   LRTG  ALV FRF Y  E+LLPG+TFLFREGRAKGIGKV ++
Sbjct:   88 TDIRVAMIGNVDSGKSSLIGVLTNGSLDDGRGLARSLVLKHKHEQSNGRTSAVTVELM---------GFKEEHQIVPTARHHSQRWAEVVAGSDKSVTLIDLCGHERYLKTTVFGLTAMYPDYALLVVGANMGVQRMTKEHVAIACALSIPIAVVITKIDMCPQPVLKQTRQTLARCLRQHQRMPLPVKDDAQVIVAAESIQNGRIAPVFSVSNVSGLGVPLLR-----NFLSKIRRAERPLTRSHTALEAPGVLPIRPASDDNICADHDQANAAQDIAALTPDYSSLPKTHLAIDGVYEVRGVGLIVGGTVTRGCISVNDTILLGPNRVGEFIPVLVRSIECKRQPIKEARPGMAATLAIRSLNRRNPLRRGYMRKGMVLIGEKDSPKATRAFEASVCILHHSTTVAEGYEPVVHAQTVRQTCALLSIHSGDHVLRTGAKALVVFRFKYHFEYLLPGTTFLFREGRAKGIGKVIKI 550          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: F0Y7C9_AURAN (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C9_AURAN)

HSP 1 Score: 465 bits (1196), Expect = 3.190e-152
Identity = 250/440 (56.82%), Postives = 313/440 (71.14%), Query Frame = 2
Query:  626 DIRIATVGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVT-LRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAASL-RTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKGIGKV 1939
            D+R+A +GNVDSGKSTLIGVL    LDDGRG ARS++L+H+HEQENGRTS V++E+M         G  G  + + ++R H QRW EVV      ++LIDLCGHE+YLKTTVFGLT +LPDF LLVVGANMGVQRMT+EHISIA AL +PIAV +TKVDICP  VLKQTRQTLA+ LR + ++P P+++  Q+  AAES    RV PVFAVS+V G GLDLL+      F    + A  P         +C        I    +VRGVG++VGGT+ RG + V   L +GPDRAG F+ VSV+SIECKRQP+  +  G +AT A+R+L R+   LRR+ +RKGMV + A D P+A+R F ADVVILHHSTTV + YQPVVHCGVVRQ+ ++++I    +L RTG  A VTFRF+Y  E+LL G+TFLFREGRAKGIGK+
Sbjct:    4 DVRVAMIGNVDSGKSTLIGVLTAGGLDDGRGGARSLVLRHKHEQENGRTSTVSVELM---------GFQGERQVLPTARQHAQRWKEVVDACDRNVSLIDLCGHERYLKTTVFGLTAMLPDFALLVVGANMGVQRMTREHISIAVALSLPIAVVVTKVDICPPDVLKQTRQTLARCLRHHGRMPMPVKERDQLANAAESAGAGRVAPVFAVSSVKGDGLDLLKG-----FLGLLERAPRPIPT-----HLC--------IDGVYEVRGVGLIVGGTLTRGAIAVGDALWLGPDRAGAFVSVSVKSIECKRQPIDAIKPGVNATLALRALHRKAPPLRRAYYRKGMVLLGASDAPRASRRFSADVVILHHSTTVQEGYQPVVHCGVVRQACALLNICNKENLLRTGAKARVTFRFMYHTEYLLVGATFLFREGRAKGIGKI 416          
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI)

HSP 1 Score: 462 bits (1189), Expect = 5.350e-151
Identity = 248/441 (56.24%), Postives = 320/441 (72.56%), Query Frame = 2
Query:  644 VGNVDSGKSTLIGVLCNASLDDGRGLARSVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQRWAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLPYPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARFKHAATPPAALFSRFFICNQPPLSPPI--SMRG--KVRGVGIVVGGTMLRGKVTVNQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLS-RRVTLRRSTFRKGMVAVDARD--------VPQATREFEADVVILHHSTTVAKNYQPVVHCGVVRQSASIVDIEGAAS-LRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAK 1924
            VGNVDSGKSTL+GVL +A+LDDGRG ARS+ILKHRHEQ+NGRTSA T+EIM         G    ++ + ++R+H+QRW E+ + S  TLTLIDLCGHEKYLKTT+FGLTGL+PDF  L+VG+NMGVQ MT+EHISI+CAL +P+ VA++KVDICP  VL+ TR+TLAK LR   K+P+P++D      AA ++A +R+TPVF +SNVTGQG+DLL+A     F +R K +    A    +          P +  S+ G  +V+GVGIVVGGT+LRG + V Q L +GPD AG F P+ VRSIE +R P+ E   GQSAT +V+S + ++ T+RR+ FRKGMV V+  D        VP   REF+A V+ILHHSTT++  YQPV+HCGV+RQSA IVDI+G    L+TG+ A+V FRFLYFAE+++PG TFLFREGRAK
Sbjct:    2 VGNVDSGKSTLVGVLTSAALDDGRGCARSLILKHRHEQDNGRTSAATVEIM---------GFKDNTQVVPTARNHIQRWVEINERSERTLTLIDLCGHEKYLKTTLFGLTGLMPDFAFLIVGSNMGVQMMTREHISISCALNLPMFVAVSKVDICPPNVLQNTRRTLAKILRSYGKMPHPVKDMDSAVIAAAAIASNRITPVFTISNVTGQGVDLLKA-----FLSRLKRSPMRYAPWEDKDPEVKYDSEIPSVYMSLDGVYEVKGVGIVVGGTVLRGTIRVGQVLYVGPDCAGSFYPIVVRSIESRRVPLGEAKTGQSATLSVKSTNPKKFTVRRAWFRKGMVVVNGVDSRPKGVDMVPIGVREFDASVMILHHSTTISCGYQPVIHCGVLRQSAGIVDIQGDDKRLKTGERAVVRFRFLYFAEYIIPGDTFLFREGRAK 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig187.2.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA57_9PHAE1.830e-19769.96Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2WNE9_9STRA1.030e-17963.43Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A836C8C3_9STRA3.960e-17963.59Elongation factor Tu GTP binding domain-containing... [more]
A0A7R9UAM3_9STRA2.700e-17762.36Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2BKI3_9STRA2.980e-17764.11Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6V2X5T2_HETAK2.000e-17563.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TYD2_9STRA9.920e-17061.80Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S3K4J1_9STRA1.730e-15755.35Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y7C9_AURAN3.190e-15256.82Tr-type G domain-containing protein (Fragment) n=1... [more]
A0A812UTX0_SYMMI5.350e-15156.24GTPBP1 protein n=1 Tax=Symbiodinium microadriaticu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig187contigP-wetherbeei_contig187:1705..5855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIQ8
PFAMsGTP_EFTU,GTP_EFTU_D3
Model size2869
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.66e-207
EggNOG OGsCOG5258@1|root,KOG0463@2759|Eukaryota
Ec32 ortholog descriptionGTPBP1, EF1alpha-like GTPase
Ec32 orthologEc-27_000690.1
DescriptionGTP metabolic process
Cds size1530
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig187.2.8prot_P-wetherbeei_contig187.2.8Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig187 2132..4943 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186153.0404706-UTR-P-wetherbeei_contig187:1704..21311683186153.0404706-UTR-P-wetherbeei_contig187:1704..2131Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig187 1705..2131 +
1683186153.103278-UTR-P-wetherbeei_contig187:4943..58551683186153.103278-UTR-P-wetherbeei_contig187:4943..5855Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig187 4944..5855 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186153.0489137-CDS-P-wetherbeei_contig187:2131..23641683186153.0489137-CDS-P-wetherbeei_contig187:2131..2364Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 2132..2364 +
1683186153.0590384-CDS-P-wetherbeei_contig187:2614..27511683186153.0590384-CDS-P-wetherbeei_contig187:2614..2751Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 2615..2751 +
1683186153.0662746-CDS-P-wetherbeei_contig187:2928..29881683186153.0662746-CDS-P-wetherbeei_contig187:2928..2988Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 2929..2988 +
1683186153.0734694-CDS-P-wetherbeei_contig187:3106..33451683186153.0734694-CDS-P-wetherbeei_contig187:3106..3345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 3107..3345 +
1683186153.0808988-CDS-P-wetherbeei_contig187:3657..38571683186153.0808988-CDS-P-wetherbeei_contig187:3657..3857Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 3658..3857 +
1683186153.0881147-CDS-P-wetherbeei_contig187:4067..45491683186153.0881147-CDS-P-wetherbeei_contig187:4067..4549Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 4068..4549 +
1683186153.0955958-CDS-P-wetherbeei_contig187:4764..49431683186153.0955958-CDS-P-wetherbeei_contig187:4764..4943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig187 4765..4943 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig187.2.8

>prot_P-wetherbeei_contig187.2.8 ID=prot_P-wetherbeei_contig187.2.8|Name=mRNA_P-wetherbeei_contig187.2.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=510bp
MEHQREQTGAESVHAIPKSCALKAPIETTPPTVETCSEEGHAAAVVTPPS
SEPPTAPPTEAPKIVSDIRIATVGNVDSGKSTLIGVLCNASLDDGRGLAR
SVILKHRHEQENGRTSAVTMEIMEASPAARLSGPNGRSRSIASSRSHVQR
WAEVVQNSHHTLTLIDLCGHEKYLKTTVFGLTGLLPDFCLLVVGANMGVQ
RMTKEHISIACALQIPIAVAITKVDICPATVLKQTRQTLAKHLRENDKLP
YPIRDSSQVDAAAESVAGDRVTPVFAVSNVTGQGLDLLRALTTLRFFARF
KHAATPPAALFSRFFICNQPPLSPPISMRGKVRGVGIVVGGTMLRGKVTV
NQQLLIGPDRAGEFLPVSVRSIECKRQPVREVGEGQSATFAVRSLSRRVT
LRRSTFRKGMVAVDARDVPQATREFEADVVILHHSTTVAKNYQPVVHCGV
VRQSASIVDIEGAASLRTGQTALVTFRFLYFAEFLLPGSTFLFREGRAKG
IGKVKRVMR*
back to top

mRNA from alignment at P-wetherbeei_contig187:1705..5855+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig187.2.8 ID=mRNA_P-wetherbeei_contig187.2.8|Name=mRNA_P-wetherbeei_contig187.2.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4151bp|location=Sequence derived from alignment at P-wetherbeei_contig187:1705..5855+ (Phaeothamnion wetherbeei SAG_119_79)
CGCTTCATCATCTACGAGCTTACTACCCCATGCTTCGAGAGTGTGCTTAT ACCACTGAGCAACGAGGATGTATTGGAAAACACAGCAAGATGCGGTGAAC GTGTGCCTAACGTTCCCGGGAACGCGCACCCTCTCAATCGACCTTTGAAG CACTACAACGGGGCCGAGAGGCAAGACCAAGCTAATATGGCACCCGTACC TGAATTCACTTCTTATTCGCGCCTTTCTTTTCTCCCGCCTTATTCGCTTT TCTTTGGCGCGCGTGCCATGGATGGAATTCTTTTGAAATACTTTTCAACG CTGGCTGCTCGTGATTACAAGAGATTGCGTACCAACCCCTCGCCTGCACG CGAGAACCGGAGCTGTTGTTCTTCTACGGGGAAGTGATCCACAGATCCGT TTTAGGAAGGGTGAAGGCAGCGAACACATGGAGCATCAAAGAGAACAAAC CGGCGCTGAAAGCGTGCATGCAATACCTAAGAGCTGTGCGCTCAAGGCGC CCATTGAAACCACGCCTCCAACTGTGGAAACCTGTAGCGAAGAGGGGCAT GCTGCTGCAGTGGTGACGCCGCCATCAAGCGAGCCACCTACCGCTCCTCC CACTGAAGCGCCAAAGATCGTCTCAGACATTAGAATCGCGACGGTTGGGA ATGTAGATAGGTAAGTGCGCAATAAATCGCGCCTCTTCGTCCGCCTTTCA ATCATCTCACCTCTGTCATGGCAGATTTTGCATGTAGCGAGAAAGAGGTG TTTGATTGATACATATGTTCACTTGGATGGAGCACCGCTTTGATTTGTGT CTCCCTTCGAGAATTTCTCTGGGGTGTTACATTGTGCTCGCCCACATAAG GCGCCTCAGTGTTGCTTTCCGCCTGCTGCTGTTGCTGTGTTACCAATCTG CTCCTGCCAGCGGAAAGTCGACGTTGATAGGAGTGCTCTGCAATGCGTCG CTGGACGACGGCCGCGGCTTGGCGCGATCGGTGATTCTCAAGCACCGGCA CGAACAGGAAAACGGCCGAACGAGCGCTGTGACCATGGAGATTATGGGTT ACCGCGGCAACGGAGAGCAGGCATGAGAAAAAAAGGGACTCCTTTTTGCG ACTGTCCCAGGCCTGGCTTCAGGGCGGCGGCGAGGAAGCATTACCTCTGC CCTAACGCTCGGCTCCATGTTTTGCAGCCCTTCATGGTTCTGCATTTACT GTCCCGTCAGTTGTATTTAAAAAGAGGCTTCGCCTGCCGCCCGCCTCTCC GGCCCCAACGGAAGGTCTCGTTCCATCGCGTCCTGTCCCGTCCTGTTCCA CCTCGTGCCGTCTCACCATCTCCCGTCTGATCCGTCCCATCGTACTCTGT TCCACTTCTGCGCGCCTGCCGCCTGCCACCTGGTGACAGGTGGTGCCGAC AGCCCGATCCCACGTGCAGCGCTGGGCCGAAGTGGTCCAAAACTCGCACC ACACGCTGACGCTCATCGACCTATGCGGGCACGAAAAGTACCTTAAGACG ACGGTGTTCGGGCTGACGGGGTTGCTTCCCGACTTTTGCCTGCTGGTAGT CGGCGCAAATATGGGGGTTCAGCGCATGACAAAGGAGCACATCAGCATCG CCTGCGCGCTGCAAATACCCATCGCCGTTGCCATCACCAAGGTAACGAGA AGGGTCATTTTTCGGGGCTGTCCGTCAGGTTTTTTCTTGCCGGTGTTGGG TAAAGTTTTGTTGGCGTTTGATAGCGTTAAGAGGGAAAAGGTCTTTGACA TTTCGACCTGGAGCTTCCCCTTTGATCATTCGGCACCAGTTCCGGCACCG GTTCCAAGAACCGGTTCTGGCACGGCTCTTACCCGCGCCACTCCAAATCA ACCGGCTTCGCGATCGAATCGCCCTCACCAAGACCGTCCGCGCTGCTTTT ACCCCAAAACATCAAAATTACACACAAAATAAAAACTTGTCCAACAATGG CAGGTGGACATCTGCCCGGCGACAGTACTCAAACAGACGCGTCAGACGCT GGCCAAGCACCTCCGCGAGAACGACAAGCTGCCCTACCCGATCCGCGACA GCAGCCAGGTCGACGCCGCCGCCGAGTCTGTGGCAGGCGACCGCGTCACG CCCGTCTTTGCCGTGTCCAATGTGACGGGCCAGGGGCTCGACCTGCTGCG GGCGTTCATCGCGCGGCTGCGGCGCAACAAGACCGGCGAGGCGGCGGGCG GCGGCGGCGGCGGCGGCGGGCCCGGGGCGGCGGTGGAGGGGACCCCGGAG GTCTATTTCCCCATCGACGGAGTCTACGAGGTAAGAAGTAGAATTGTCTC TGTGCAACTTTTTTTTCTCTTTTTAGTCTGGCAGTGTCATTTGAGAACAG AAATTGGAGAGAGTCTGACAACTCTTCGTTTTTTCGCACGGTTTAAACAT GCTGCCACTCCGCCTGCTGCCCTTTTTTCTCGTTTTTTCATCTGCAACCA ACCCCCACTATCACCGCCGATATCAATGAGGGGAAAGGTCCGCGGCGTTG GCATCGTCGTAGGCGGGACGATGCTGCGCGGCAAAGTGACCGTCAACCAG CAGCTGCTCATCGGGCCGGACCGCGCCGGCGAGTTCCTGCCCGTGTCTGT CCGCAGCATCGAATGCAAGCGGCAGCCCGTCCGCGAGGTCGGCGAGGGGC AGAGCGCCACCTTTGCCGTCCGCTCGCTGAGCCGCCGCGTCACGCTCCGC CGCTCCACTTTTCGCAAGGGCATGGTTGCCGTCGATGCGCGGGACGTACC GCAGGCGACGCGCGAGTTCGAGGCCGACGTAGTGATCCTGCATCACTCGA CGACCGTGGCGAAGAACTACCAACCCGTGGTCCATTGCGGCGTGGGTGAG TCGGAGTCCGGCCGGCTGAGGGGTGTTTGAGCAGGAAAGCTGCTCGGCCG CTTTTCGAGACCTCGTTGCAAGGATAGCGCCACTCTAAAAATAGCTGCGC GGCTGCTTTCAAGAGTTAAAAAGCTGACGGTATAGGGGCCGTCACATGGC ATAGCCTCGAAGGGTCAAACTCACGCGTTATCCTCCACCTTTGGCTCTTC CAAATCGCAGTGCGGCAGTCGGCGTCCATCGTGGACATCGAGGGCGCCGC GAGCCTGCGGACGGGCCAGACGGCGCTCGTCACCTTTCGCTTTCTGTACT TCGCCGAGTTCCTCCTGCCCGGCAGCACCTTCCTCTTTCGGGAGGGCCGT GCCAAGGGCATCGGCAAGGTCAAACGCGTGATGCGGTGACGACCGGCGGC AGGCGGGCGGGGACCGGCGGCGGCGGTGGCGAGCCAGCGATCCGGGGGCC CGGGGCCGGTCATGTTGCGGCCGGCCGGGTGGCGAGCGTTTGATTCGCTG GGAAAGACGGTGGCGGCGAGGACGGCGGCAGCGGGGCCTGCGGCGGCGGA AGCGACGGCTGCGGCCGCGGTGGGTGGAGGTGATAGCGGCGGCAACAAAT GGCACTGGCCACCCAAGCTGTAGCCACAGGGCCGTGGCCGCAGCTGCTGG CTAGCGGAAGGCCGCCATCGGCTGCTGCGGCGGTGAGGATCTGCCGCCGC CAGGCGAGCTGATGGAGTCGCGATTGGTTGTGCTGCGTTTCTGAAAAATA GCAGCGGTTCAACGAGGTGAGAGACGAGATGGGCGAGCGGGAGGAGAGAG CGGAAGCGGACGACACGGGTTTGTCAATGGCGGCTTGAAATATCACGATG TCAAGAAAAGTTATTGATTGAAGTGGTGAAGAGGCGATGGCGGTTAGGGC GGGAGAAAGGGCACCGGAAAGATTGCTTTGGCCAAAAAAAACGATGGGAA GGGGACCACCGTCAAGCCCTGTTGGGACGGCAGTTGCGCCATCTCAGGGA AAAATGTGGCGTGAGGATAAAAAAAGAAAGGGCGTCCGAATACAGATGAG GGGCTGCCGCCATAAACGACGAGGGCATGCGCAGTCGCCGGAACCGACCG GCTGCAACAGGACGGGCCATTCGCACGCTACAGAGCACGAGGCGGATGAT TTTTTCTGATGGCTGCCCGTGCCGCTGCCACGCGGGTCGCCCGCGGCCGC TCGAAACTGCTTAGCGTGGTGGGCAGGCGGAGGAAGTAACTGGGCACGGC TACTACTGAACGTTCCCTCATGCTCTTTATAATGAAACAATTTTTCCAAC C
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig187:1705..5855+

>mRNA_P-wetherbeei_contig187.2.8 ID=mRNA_P-wetherbeei_contig187.2.8|Name=mRNA_P-wetherbeei_contig187.2.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1530bp|location=Sequence derived from alignment at P-wetherbeei_contig187:1705..5855+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCATCAAAGAGAACAAACCGGCGCTGAAAGCGTGCATGCAATACC
TAAGAGCTGTGCGCTCAAGGCGCCCATTGAAACCACGCCTCCAACTGTGG
AAACCTGTAGCGAAGAGGGGCATGCTGCTGCAGTGGTGACGCCGCCATCA
AGCGAGCCACCTACCGCTCCTCCCACTGAAGCGCCAAAGATCGTCTCAGA
CATTAGAATCGCGACGGTTGGGAATGTAGATAGCGGAAAGTCGACGTTGA
TAGGAGTGCTCTGCAATGCGTCGCTGGACGACGGCCGCGGCTTGGCGCGA
TCGGTGATTCTCAAGCACCGGCACGAACAGGAAAACGGCCGAACGAGCGC
TGTGACCATGGAGATTATGGAGGCTTCGCCTGCCGCCCGCCTCTCCGGCC
CCAACGGAAGGTCTCGTTCCATCGCGTCCTCCCGATCCCACGTGCAGCGC
TGGGCCGAAGTGGTCCAAAACTCGCACCACACGCTGACGCTCATCGACCT
ATGCGGGCACGAAAAGTACCTTAAGACGACGGTGTTCGGGCTGACGGGGT
TGCTTCCCGACTTTTGCCTGCTGGTAGTCGGCGCAAATATGGGGGTTCAG
CGCATGACAAAGGAGCACATCAGCATCGCCTGCGCGCTGCAAATACCCAT
CGCCGTTGCCATCACCAAGGTGGACATCTGCCCGGCGACAGTACTCAAAC
AGACGCGTCAGACGCTGGCCAAGCACCTCCGCGAGAACGACAAGCTGCCC
TACCCGATCCGCGACAGCAGCCAGGTCGACGCCGCCGCCGAGTCTGTGGC
AGGCGACCGCGTCACGCCCGTCTTTGCCGTGTCCAATGTGACGGGCCAGG
GGCTCGACCTGCTGCGGGCTCTGACAACTCTTCGTTTTTTCGCACGGTTT
AAACATGCTGCCACTCCGCCTGCTGCCCTTTTTTCTCGTTTTTTCATCTG
CAACCAACCCCCACTATCACCGCCGATATCAATGAGGGGAAAGGTCCGCG
GCGTTGGCATCGTCGTAGGCGGGACGATGCTGCGCGGCAAAGTGACCGTC
AACCAGCAGCTGCTCATCGGGCCGGACCGCGCCGGCGAGTTCCTGCCCGT
GTCTGTCCGCAGCATCGAATGCAAGCGGCAGCCCGTCCGCGAGGTCGGCG
AGGGGCAGAGCGCCACCTTTGCCGTCCGCTCGCTGAGCCGCCGCGTCACG
CTCCGCCGCTCCACTTTTCGCAAGGGCATGGTTGCCGTCGATGCGCGGGA
CGTACCGCAGGCGACGCGCGAGTTCGAGGCCGACGTAGTGATCCTGCATC
ACTCGACGACCGTGGCGAAGAACTACCAACCCGTGGTCCATTGCGGCGTG
GTGCGGCAGTCGGCGTCCATCGTGGACATCGAGGGCGCCGCGAGCCTGCG
GACGGGCCAGACGGCGCTCGTCACCTTTCGCTTTCTGTACTTCGCCGAGT
TCCTCCTGCCCGGCAGCACCTTCCTCTTTCGGGAGGGCCGTGCCAAGGGC
ATCGGCAAGGTCAAACGCGTGATGCGGTGA
back to top