mRNA_P-wetherbeei_contig1868.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE) HSP 1 Score: 254 bits (648), Expect = 1.530e-73 Identity = 149/304 (49.01%), Postives = 185/304 (60.86%), Query Frame = 1
Query: 10 GEREDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGADGKGAVQAIVDIVQAPLR----SGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFR-QTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQVRYRKCVXXXXXXXXXXXXXXXXXXEAYNDSRKLMQGVHENLLGVPYNDPTLKKA 906
G+ D RPEA++I+LCGPPG+GKTTLAQVVA+HAGYR E+NASDDR+A VLR++V AME D RP I+LDEVDGADGK A Q +VDI APL + G G L RPL+LICND LRPIRA+AQVF+FR +++ ARL QRLK +C +ERL VN AL LA+ + D+R CL+TLQF + + SGS SAAL+ AV GIKDER+D F+ + +A+ND K++ GVHEN LGV +NDPTL KA
Sbjct: 351 GDATDKRPEARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQRVTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAAAGGGKKGKRRTS-------------LTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARRAS-------SGSVTNASAALLTAVAEGIKDERRDLFE-GVLWVLGVRGSMADRKDADVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKA 633
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A836CAX9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX9_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.480e-60 Identity = 145/276 (52.54%), Postives = 180/276 (65.22%), Query Frame = 1
Query: 10 GEREDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREK-------------------VIRAMESRAAFGDCRPRCIILDEVDGADGKGAVQAIVDIVQAPLRS--GGNGXXXXXXXXXXXXXXXKAA-------AHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASY---QGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQV 744
G R D RPE+K++LLCGPPGMGKTTLA +VA+ AGYR E+NASDDR+A VL +K V+RAME+RA FGD RP IILDE+DGA+ K A+ AI+ + APL G G XXXXXXXXXXXXXX HPL RPLILICN+ +A HLR +R A VF FR+ + RL +RL+V+CAAE + + +L AL E+TGND+R CLNTLQF ++ Q R + G G VS AL+ A+ G+KDER+D FQV
Sbjct: 508 GGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQV 783
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA) HSP 1 Score: 212 bits (540), Expect = 6.840e-60 Identity = 126/257 (49.03%), Postives = 158/257 (61.48%), Query Frame = 1
Query: 13 EREDLRPE--AKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGADGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXX-KAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGS----------AAAVSAALMEAVEAGIKDERKDAFQV 744
+R D RPE A+ ILL GPPG+GKTTLA V+A H GYR E+NASDDRSA LREK+ RAM+++A GD RP CIILDE DG +GK A++ IV+I++APL+S G + PL RPLI ICND + LR +R +A VF FR+ RL QRLK +C AE LPV AL+ L EA+G+D+R CLNTLQF + A S G G A+ +S L+E V G+KD+ KD QV
Sbjct: 41 QRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQV 297
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.350e-58 Identity = 126/257 (49.03%), Postives = 158/257 (61.48%), Query Frame = 1
Query: 13 EREDLRPE--AKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGADGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXX-KAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGS----------AAAVSAALMEAVEAGIKDERKDAFQV 744
+R D RPE A+ ILL GPPG+GKTTLA V+A H GYR E+NASDDRSA LREK+ RAME++A GD RP CIILDEVDG +GK A++ IV++++APL+ G + PL RPLI ICND + LR +R +A VF FR+ RL QRLK +C AE LPV AL+ L EA+G+D+R CLNTLQF + A S G G A+ +S L+E V G+KD+ KD QV
Sbjct: 442 QRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMENQAVLGDKRPNCIILDEVDGIEGKAAMKMIVNMIKAPLKGKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQKEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQV 698
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: W4FLC8_9STRA (AAA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLC8_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.970e-58 Identity = 125/302 (41.39%), Postives = 173/302 (57.28%), Query Frame = 1
Query: 22 DLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAA--HPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQVRYRKCVXXXXXXXXXXXXXXXXXXEA--YNDSRKLMQGVHENLLGVPYNDPTLKK 903
D+RPE K+IL+CGPPG GKTTLA + ARHAGY E+NASDDRSA VL+EK+I AME +A FG+ RP CIILDE+DGA DGKGA+ AI ++ AP S KAA HP++RP+I ICND A LRP+R LA++F+ + +L QR+K +C E + + + L+ L + ND+R CLN LQFAS + ++AA++ ++++++ G KD K AF V A + ++ G+H+NLL + +NDPTL K
Sbjct: 235 DIRPEHKIILICGPPGAGKTTLASIAARHAGYNPVEINASDDRSAGVLKEKIINAMEMQAIFGNNRPNCIILDEIDGAMGGPDGKGAISAIQALIAAPYSS----RTKPSKQQHAAASNKKAAGGQHPVIRPIICICNDQFAPVLRPLRRLAKIFVMHTPDPRQLMQRMKFICKQENIRASNSLLSTLCDRADNDVRFCLNALQFASAR-----------TSAALTVSMIDSMM-GRKDVSKGAFDVWDTVFFESKEQQKDKSNACMRVCDTADRFGSHELILHGLHDNLLPLVFNDPTLTK 520
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A024UQ25_9STRA (AAA domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQ25_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.340e-57 Identity = 120/301 (39.87%), Postives = 170/301 (56.48%), Query Frame = 1
Query: 19 EDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQVRYRKCVXXXXXXXXXXXXXXXXXXEA--YNDSRKLMQGVHENLLGVPYNDPTLKK 903
+D+RPE K+IL+CGPPG GKTTLA + ARHAGY EVNASDDR+A VLR+K+I AME +A FG+ RP CIILDE+DGA +GKGA+ A+ ++ AP A HP++RP+I ICND A LRP+R LA++F+ ++ +L QR+K +C ER+ + + L+ L E ND+R CLN LQFAS Q + ++ ++++++ G KD K A+ V A + ++ G+H+NLL + +NDPTL K
Sbjct: 231 QDIRPEHKIILICGPPGAGKTTLASIAARHAGYNPIEVNASDDRTAGVLRDKIINAMEMQAIFGNNRPNCIILDEIDGAMAGQEGKGAIAALQALIAAPYTP--------PSIKKVATKQRSAGGHPVIRPIICICNDQFAPVLRPLRKLAKIFVMHTPDSRQLVQRMKYICHQERVQASNSLLSTLCERADNDVRFCLNALQFASAQ------------TSVLTLSMIDSMM-GRKDLSKGAYDVWETVFFETKDQQKDKSTAFARVFDAADRFGSQELILNGLHDNLLPLVFNDPTLTK 510
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A6G0XG15_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG15_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.890e-56 Identity = 124/303 (40.92%), Postives = 163/303 (53.80%), Query Frame = 1
Query: 22 DLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVE--AGIKDERKDAFQVRYRKCVXXXXXXXXXXXXXXXXXXEA---YNDSRKLMQGVHENLLGVPYNDPTLKK 903
D+RPE K+IL+CGPPG GKTTLA + ARHAGY E+NASDDR+A VL+EK+I AME ++ FGD RP CIILDE+DGA +GKGA+ A+ +V AP A HPL+RP+I ICND A LRP+R LA++FI +L QRLK +C E++ + + L+ L ND+R CLN LQFAS A S + ++ G KD K A+ V + EA + ++ G+HENLL + +NDPTL K
Sbjct: 223 DMRPEQKIILICGPPGAGKTTLAGIAARHAGYNPIEINASDDRTAGVLKEKIISAMEMQSIFGDQRPNCIILDEIDGALSGQEGKGAISALQALVTAPYAP----------RSKKGKKAANAGGHPLIRPIICICNDQFAPVLRPLRKLAKIFIMHTPEPRQLMQRLKYICKQEKVQASNSLLSTLCLRADNDVRFCLNALQFAS---------------AKTSTLTLSMIDNMMGRKDVSKGAYDV-WETVFYESKEQQKNDSDSFSRVFEATDRFGSQDLILSGLHENLLPLAFNDPTLSK 499
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A067D114_SAPPC (AAA domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D114_SAPPC) HSP 1 Score: 202 bits (514), Expect = 6.610e-56 Identity = 117/302 (38.74%), Postives = 170/302 (56.29%), Query Frame = 1
Query: 19 EDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERK---DAFQVRYRKCVXXXXXXXXXXXXXXXXXXEAYNDSRKLMQGVHENLLGVPYNDPTLKK 903
+D+RPE K+IL+CGPPG GKTTLA + ARHAGY EVNASDDR+A VLREK+I AME ++ FG+ RP CIILDE+DGA +G+GA+ A+ D++ P + K + HPL+RP+I ICND +A LRP+R LA++F+ + +L RLK +C E L + L+ L ND+R CLN+LQFAS + + V+ +++E + G KD K D + V + + + + ++ G+H+N+L + +NDPT+ K
Sbjct: 232 DDIRPEHKIILICGPPGAGKTTLAGIAARHAGYNPIEVNASDDRTASVLREKIISAMEMQSIFGNARPNCIILDEIDGALHGNEGRGAIAALQDLIAVPYSN-----------KKKDKAAKKKSGHPLIRPIICICNDQYAPVLRPLRKLAKIFVLGTPDPRQLMSRLKFICRNEHLDAPTSVLSTLCTRADNDVRFCLNSLQFASAKTKQ------------VTPSMVEDIM-GRKDLSKGVYDVWDVVFYEPRQKKKETKATGFARVFEAADRFGSPDLVLNGLHDNMLQLVFNDPTMTK 509
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A662WL79_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WL79_9STRA) HSP 1 Score: 204 bits (518), Expect = 8.410e-56 Identity = 135/310 (43.55%), Postives = 170/310 (54.84%), Query Frame = 1
Query: 4 GGG---EREDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQVRYRKCVXXXXXXXXXXXXXXXXXXEA---YNDSRKLMQGVHENLLGVPYNDPTLKK 903
GGG E ED RP K+IL+CGPPG GKTTLA +VARHAGY EVNASDDR+A VL+ K+I AME ++ +GD +P C+ILDE+DGA DGK A+ AI +IV APL S G HPL RPLI ICND +AA LRP+R LA++F+ + RL RLK +C E + + ALAAL + ND+R CLNTLQF S Q RAA G S S A + + G KD F+ EA + L+ G+ EN+ + +NDPT+ K
Sbjct: 326 GGGADVELEDKRPFDKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLKNKIISAMEMQSIWGDRKPNCLILDEIDGALNGLDGKSAIAAIQEIVAAPLPSKKAGAKTTTKNR-----------HPLTRPLICICNDQYAAVLRPLRQLAKIFVLDTPHPQRLITRLKFICRHEGIKASTGALAALCSSGDNDVRYCLNTLQFQSTQA-RAAGVGES------SLATLNSKLVGQKDHTHGVFEAMDLVFYESRSKAAKGELPVAEKIQEAAFSLGNFPLLINGLDENVPKMVFNDPTMNK 617
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Match: A0A8K1FLV3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLV3_PYTOL) HSP 1 Score: 202 bits (513), Expect = 2.450e-55 Identity = 125/306 (40.85%), Postives = 169/306 (55.23%), Query Frame = 1
Query: 7 GGEREDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRSAPVLREKVIRAMESRAAFGDCRPRCIILDEVDGA----DGKGAVQAIVDIVQAPLRSGGNGXXXXXXXXXXXXXXXKAAAHPLLRPLILICNDPHAAHLRPIRALAQVFIFRQTNAARLTQRLKVVCAAERLPVNVTALAALAEATGNDIRCCLNTLQFASYQGGRAAASGGSGSAAAVSAALMEAVEAGIKDERKDAFQVR---YRKCVXXXXXXXXXXXXXXXXXXEAYNDSRKLMQGVHENLLGVPYNDPTLKK 903
G + D RP K+ILLCGPPG GK+TLA +VARHAGY EVNASDDR+A VL+ K+I AME ++ +GD +P CIILDE+DGA DGK A+ AI +I+ APL S + K++ HPL RPLI ICND A+ LRP+R LA++F+ N+ RL RLK +C +E L LA+L GND+R C+N LQF S Q ++ AV++ L+ G KD + F+ + K ++ + L+ + ENL + YNDPT+ K
Sbjct: 287 GVDTNDPRPREKIILLCGPPGAGKSTLASIVARHAGYNPIEVNASDDRTAGVLKNKIISAMEMQSIWGDRKPNCIILDEIDGAMNSGDGKSAIAAIQEIISAPLNSNKDAKNGKRT---------KSSQHPLTRPLICICNDQFASVLRPLRKLAKIFVLDPPNSQRLVTRLKFICRSEGLRSTTGVLASLCANGGNDVRYCVNALQFQSTQTKHITST-------AVASGLI-----GQKDHSRGVFETMDMVFYKAKSKSSSKAAPIMDQIDEAAQSLGNFPLLINALDENLPKMMYNDPTMNK 571 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1868.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1868.2.1 >prot_P-wetherbeei_contig1868.2.1 ID=prot_P-wetherbeei_contig1868.2.1|Name=mRNA_P-wetherbeei_contig1868.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp NGGGEREDLRPEAKVILLCGPPGMGKTTLAQVVARHAGYRTEEVNASDDRback to top mRNA from alignment at P-wetherbeei_contig1868:43..1327+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1868.2.1 ID=mRNA_P-wetherbeei_contig1868.2.1|Name=mRNA_P-wetherbeei_contig1868.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1285bp|location=Sequence derived from alignment at P-wetherbeei_contig1868:43..1327+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1868:43..1327+ >mRNA_P-wetherbeei_contig1868.2.1 ID=mRNA_P-wetherbeei_contig1868.2.1|Name=mRNA_P-wetherbeei_contig1868.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig1868:43..1327+ (Phaeothamnion wetherbeei SAG_119_79)back to top |