mRNA_P-wetherbeei_contig18628.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18628.1.1
Unique NamemRNA_P-wetherbeei_contig18628.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A7Z9PVW7_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVW7_9BACT)

HSP 1 Score: 209 bits (532), Expect = 2.990e-61
Identity = 124/295 (42.03%), Postives = 163/295 (55.25%), Query Frame = 1
Query:   91 RNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQGRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSKGC-----KDQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRPLEAAVEALAYLRSPALLGCEVGAHLCEGLLGRQAG 960
            R  +  AE+A    F  LG E   FP AIDWF DF  RSW++    DL++ L+RP ++   + + MGPVE TW+FN  G FVD+GRAYW+T  E   +EF+VQ VDW ERN  +YGINW+ P  ++ R +NW L+F +F  S+Q+Q E + RILR L+ HG  +A +L +       +D LA AA+L  LA + PE  A++RW  L+ + L + A     +DGLH S S A  RE  EWLLL       N     P  R L  A E      S    GC  G H    L G   G
Sbjct:   25 RKTLLLAEEAKNRTFIELGIEK-SFPGAIDWFTDFGERSWIFGADSDLRDVLKRPNEQ--GSDEPMGPVEATWSFNSHGHFVDMGRAYWLTGWESLVAEFIVQIVDWLERNPALYGINWIDPSSISARTINWMLAFNLFSMSDQMQAEVMGRILRGLVTHGAVMADILEQPDDALPPQDLLATAAALNCLAMYLPELKAAQRWYNLSAEQLSKRAWETMGRDGLHLSGSAAKQREMLEWLLLPEVLHRLNGL---PSPRGLREATETACEADSTGPTGCGSGTHRGVHLRGPTRG 313          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A7V5FGT5_9BACT (Alginate lyase family protein (Fragment) n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7V5FGT5_9BACT)

HSP 1 Score: 111 bits (277), Expect = 2.800e-23
Identity = 92/319 (28.84%), Postives = 139/319 (43.57%), Query Frame = 1
Query:   97 IVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSW---LYAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSKGCKDQ---LAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRP-LEAAVEALAYLRSPALLGCEVGAHLCEGLLGR--QAGPIEHTRRILAMAAVLLERGDF 1023
            I+  ++  + + FS LG  P +    + W  D + G  W    Y  V  L ER            Q+   ++  W  ++      LGR YWI+ NE +AS+F     DW   N   YG+NW+    VA RA+NWT     F+ S+         IL  L  HG ++   L    ++    L+ A  L++L   F +    R+WL L ++ LEE    +   DG+    S+A HR  TE L++       N   + P+ R  LE   E + +   P      +G    +G L R   + PI   R +L++ AVL  R DF
Sbjct:   92 IIGGSDTEINNTFSVLGSAPIKLSLPLPWHEDVKTGGRWELRYYTRVR-LHER------------QKHSDIKVPWEISRFHFAAWLGRVYWISGNEAYASKFAEMVEDWIRANPFPYGVNWMTSMEVAFRAINWTFGCAYFVNSKSFSQGLQDSILLYLYLHGAFIEFNLEFALRNHNHLLSDATGLFVLGLFFQDTKRGRKWLRLGKRLLEEEIRNQVRPDGVDYEQSIAYHRLVTELLVVPYILAERNHIPFSPIYRQRLEKMFEFIMHYTKPDGSVPLIG-DADDGRLFRFSPSQPINDHRYLLSIGAVLFNRADF 396          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A355TP41_9BACT (Hepar_II_III_N domain-containing protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TP41_9BACT)

HSP 1 Score: 100 bits (250), Expect = 3.070e-21
Identity = 54/167 (32.34%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    1 FHHRLRPHSFVHAGHVESYIEPFKTFPNDCRNIVAQAEKALQHKFSP-LGGEPYEFPHAIDWFGDFQGRSWLYAHVDDLQERLQRP----LDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNW 486
            F  R RP  F+     ++  + FK  P+  + +    ++A++H FS  L  +   F   IDWF DF  RSW    V +L++ L       L+E  + L +   ++RTW  N+   F+ L R+YW++  + +ASE ++QA +WG  N    G+NWL    +A R +NW
Sbjct:   75 FRDRSRPTLFLRYPDAKAIADTFKASPSAVKELSDATQQAMRHTFSSYLSNQQETFSGEIDWFSDFCSRSWPKTAVKELRKILSPANVANLNE--SPLARYPSLDRTWELNEHYHFLTLARSYWLSKQDKYASEILIQATEWGTSNPLWIGVNWLNFDTIAIRLMNW 239          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: UPI0013C2E7D6 (alginate lyase family protein n=1 Tax=Aggregatilinea lenta TaxID=913108 RepID=UPI0013C2E7D6)

HSP 1 Score: 103 bits (257), Expect = 1.170e-20
Identity = 98/333 (29.43%), Postives = 143/333 (42.94%), Query Frame = 1
Query:   70 KTFPNDCRNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSWLYAHV---DDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSK----GCKDQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRPLEAAVEAL-AYLRSPALLGCE-VGAHLCEGLLGRQAG-PIEH----TRRILAMAAVLLERGDF 1023
            + +P     ++A +E A    F  L  +P  +P  I W    + G  W + H+   DD+     RP D            +  W  N+   FV LG AY +T +E +A  F  Q + W E N P +G+NW     VA R +NW L+F  F GS  +Q       L++      +LAA L+          +   A+L L  A FPEF  +  W     + + E    +   DG+++  +    R   E+LL V    I   R   P    LEA +E +  Y+R   ++G   VG    +   G   G P  H     R +LA+ AVL ERGDF
Sbjct:   91 RRYPGTRERLLAASENACVRTFDLLH-QPASYPGDITWQRCPETGWDWPFTHISIIDDIIWEPDRPAD-----------FKLVWEVNRHQHFVTLGLAYRLTGDERYAKAFCDQLLSWIEGNPPEHGVNWFSALEVAIRLINWMLAFQCFRGSSTVQARAAGAFLKSFYQQATFLAAHLTTYEPVPNNHLIGETAALALAGAIFPEFKDAANWRDTGLRIMTEAVLSQTHDDGVNKEQATGYMRFVAEFLLAVI---IPGRRGLLPRQPELEATLERMFGYMRH--VVGVSGVGPLWGDSDDGYAIGLPNAHGFWDMRWLLAVGAVLFERGDF 406          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A7V3UG40_9BACT (Alginate lyase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UG40_9BACT)

HSP 1 Score: 100 bits (249), Expect = 1.430e-19
Identity = 94/329 (28.57%), Postives = 133/329 (40.43%), Query Frame = 1
Query:   76 FPNDCRNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSKGCKDQ----------LAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRPL-EAAVEALAYLRSPALLGCEVGAHLCEGLLGRQAGPIEHT-RRILAMAAVLLERGDF 1023
            +P      +  A+K    +F        E+   I W    + GRSW      DLQ            +L +   ++  W  N+   F+DLG+AYW+TD E +   F+   V W ++N    GINW  P  V+ R L W   +  F+  + L        LR + +HG  L A L +               +A AA LYL+ A FPEF  S+ W   + Q L+ G              SLA    + E  L+       N     P L  L E A+E +  L  P      +G      L+ R   P+E   R +L + AVLL RGDF
Sbjct:   98 YPEAYEKTLDIADKICNGRFVLFNHHLLEYEGDIHWNQSHKSGRSWDVHSCPDLQA---------FESLSEGEDIQFIWELNRHRHFLDLGKAYWLTDQEKYVQTFLYHLVSWIDQNPFPRGINWSNPFEVSLRCLFWLFGYFFFISFKHLDALFHLNWLRYIYFHGYTLEAHLKRIASPHPQRTFLLHEIIAQAAVLYLIGALFPEFKKSKEWRDESTQILQGGFASLLPSAKSIIEDSLAGILVSVELYLITLITRRVNRLYLLPQLTSLTERALEYIMDLIKPCGQLPRIGDEHLSCLI-RSTSPMETGFRHLLTLGAVLLNRGDF 416          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A1Q7KU66_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=Acidobacteria bacterium 13_1_40CM_4_58_4 TaxID=1803453 RepID=A0A1Q7KU66_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.320e-19
Identity = 85/329 (25.84%), Postives = 129/329 (39.21%), Query Frame = 1
Query:  103 AQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYL------------AALLSKGCKDQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRP-LEAAVEALAYLRSPALLGCEVGAHLCEGLLGRQAGPIEHT--------RRILAMAAVLLERGDF 1023
            A+A+    H F  LG  P      IDW  DF+ G  W   +   ++E            L     ++  W  ++   FV LG AYW+T+ E +A+EFV Q  DW ERN P +G+NW     VA RA+NW   + +F GS Q   +  + +  +L  HG Y+               +       ++    L  L    P    +R WL    + L+     +   DG+H   S + HR   E +L        N+     +++   EA +E   +   P          LC  +     G + H         R +LA+      RGDF
Sbjct:   72 AKADSYCAHVFDLLGSGPVRLGDHIDWHQDFKSGARWEPKYFKQIKE----------IELGDASDIKVPWELSRCHHFVSLGIAYWLTEKEKYAAEFVSQCRDWIERNPPYHGVNWHCAMEVAIRAINWIWGYYLFAGSPQFDTQTRAAMACSLATHGEYIWNNLEFDKRVTEGRYVRHNGNHYISDLIGLIYLGLVLPGQDPNR-WLRNGLEELDREMQVQVLPDGVHWELSPSYHRLVLELVLPAVILCSRNNIPVPQIIKQKCEAMLEYTKHYLKPD--------GLCPLVRDADDGRVYHLDDNDYRDHRHLLALGGAFFARGDF 381          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A1F4YNS5_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=candidate division Zixibacteria bacterium RBG_16_53_22 TaxID=1802787 RepID=A0A1F4YNS5_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 4.160e-19
Identity = 79/280 (28.21%), Postives = 120/280 (42.86%), Query Frame = 1
Query:   28 FVHAGHVESYIEPFKT-FPNDCRNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSWL-YAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALN--WTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAA---LLSKGCKDQLAVA--ASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAW 837
            F   GH   Y E  ++ F +  R  + +AE+AL H F  LG         I+W  DF+ GR W   AH    + ++  P D+          V+  W  ++L    DLGRAY++T+N+ +  EF+     W   N    G+NW     VA RA+N  W + F  F   ++   E +  I+R L YH  ++      +S G      ++    L+ +   F EF  S+ WL +    LE     +   DG     S + HR   E  L   A    N+ A+
Sbjct:   55 FFGPGHAREYREAIESNFADSGRETILRAERALAHTFDLLGSGEVCLGETINWHADFKSGRIWPGKAHG---RIKIVYPDDK--------SDVKVPWELSRLQFLTDLGRAYFLTENDAYKDEFMAVLRGWEAANPVDIGVNWTCSMEVAIRAINIVWGMHFFRFDDDDR---EFVQSIIRLLYYHANHIEKNLEFISDGANSNHLISNYLGLFYIGLIFSEFDRSQEWLGIGSAGLENEMLSQVMPDGPDYEGSTSYHRLVLEMFLSAYALGARNNVAF 320          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A2G6KL66_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6KL66_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 6.730e-18
Identity = 67/233 (28.76%), Postives = 106/233 (45.49%), Query Frame = 1
Query:   49 ESYIEPFKT-FPNDCRNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQGRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVER----TWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSKGCK-------DQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLE 711
            +S I+   T + ++   I+  A   + H+      +  +    I W  D++  +         +    +P D+Q A  Q +   +      W  N+   F+DLG+AYW +D+E FA EFV +   W E+N    GINW+ P  +A R L W  S+  FL S+    +   +  + LLYHG      L K  +         +A AA LYLL   FPE+  S++W V   + L+
Sbjct:   63 QSIIDALNTHYASEASKILDAANAIMTHQLLLFSSQTIQTDTPILWNRDYEAGTRF-------EPERWKP-DKQYARSQLLDHTQSDIYFVWELNRHRHFLDLGKAYWYSDDERFAEEFVQEVESWIEQNPYPNGINWVDPYEIAIRGLFWLFSYNFFLRSDWFDEDFFCQFYKILLYHGHVTYNALQKASRFSSLSGGSLVAQAAFLYLLGTLFPEYLHSKQWSVFGWEVLQ 287          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A1F3BBU4_9BACT (Hepar_II_III_N domain-containing protein (Fragment) n=1 Tax=Armatimonadetes bacterium RBG_16_58_9 TaxID=1797287 RepID=A0A1F3BBU4_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.480e-16
Identity = 70/245 (28.57%), Postives = 107/245 (43.67%), Query Frame = 1
Query:   70 KTFPNDCRNIVAQAEKALQHKFSPLGGEPYEFPHAIDWFGDFQ-GRSWLYAHVDDLQERLQRPLDE-QVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSK---GCKDQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATE 789
            +TF ++  +IVA A++   H F  LG         IDW  DF+ G+SW  +H         RPL   ++ +      ++  W  ++  Q   LGRAYW+T +E +A+EF  +   W E N    G NW     VA R+ NW L +  F     L     S  LR+L  HG ++   L +        +A  A  + L   F +    RRW  L+   + +    +   DG+    S++ HR   E
Sbjct:   77 ETFDHEA-DIVAAADEVCDHVFDLLGSGKKALGDPIDWHTDFKSGKSWP-SH---------RPLRPGEITSAGAGADIKVVWELSRFQQVGVLGRAYWLTGDEKYATEFANEVSSWIEANPWGRGPNWACAMDVAIRSANWILGYHFFERCTSLDDAFHSTFLRSLWEHGWFIERNLERQQINSNHYIADLAGFFALGVFFADTGRGRRWRDLSYDRMCDQVREQVLADGVDYEKSISYHRLVLE 310          
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Match: A0A2V7Q9Z8_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7Q9Z8_9BACT)

HSP 1 Score: 84.3 bits (207), Expect = 3.690e-14
Identity = 87/318 (27.36%), Postives = 126/318 (39.62%), Query Frame = 1
Query:   97 IVAQAEKALQHKFSPLGGEPYEFPHAIDWFGD-FQGRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVERTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWLYPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLS--KGCKDQLA-VAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLHRSASLAMHREATEWLLLVAAFDITNSRAWEPLLRP-LEAAVEALAYLRSP----ALLGCEVGAHLCEGLLGRQAGPIEHTRRILAMAAVLLERGDF 1023
            ++ +AE   Q  F  LG    +F   +DW  D   G      H       ++ P     A        +  W  N+   F  LG+AYW + +E +A+ FV   + W + N P  G+NW     +A RA++W      F  S  L      R L+ L  HG ++   LS   G    L   A  L  L   FPEF  + RW  L    L E   ++   DG +   S    R   ++ L ++     N    EP++   L A +  L YL  P     L+G + G  L + L  R        R  LA  AVL E  ++
Sbjct:  147 VLEKAECIRQGLFDLLGRTRVDFGLPVDWHLDPVSGERVSRLHWS----LVEHPKPNSAA------DYKLIWELNRHQYFAILGKAYWYSGDERYATTFVEHLMGWMDGNPPKCGVNWASSLELAFRAISWIWGLYFFKTSPSLTEATFWRALKFLYLHGRHIETFLSTYSGPNTHLTGEALGLLYLGTLFPEFRDAGRWRRLGWSILLEHLDKQVRPDGSYFEQSTYYQRYTADFCLHLSILGQLNGLPVEPVVHAKLRALLTHLMYLTQPDGRTPLIGDDDGGRL-QVLDDRAPNDF---RAALATGAVLFEDPEY 450          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18628.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A7Z9PVW7_9BACT2.990e-6142.03Hepar_II_III_N domain-containing protein n=1 Tax=P... [more]
A0A7V5FGT5_9BACT2.800e-2328.84Alginate lyase family protein (Fragment) n=1 Tax=I... [more]
A0A355TP41_9BACT3.070e-2132.34Hepar_II_III_N domain-containing protein (Fragment... [more]
UPI0013C2E7D61.170e-2029.43alginate lyase family protein n=1 Tax=Aggregatilin... [more]
A0A7V3UG40_9BACT1.430e-1928.57Alginate lyase family protein n=1 Tax=bacterium Ta... [more]
A0A1Q7KU66_9BACT2.320e-1925.84Hepar_II_III_N domain-containing protein n=1 Tax=A... [more]
A0A1F4YNS5_9BACT4.160e-1928.21Hepar_II_III_N domain-containing protein n=1 Tax=c... [more]
A0A2G6KL66_9BACT6.730e-1828.76Hepar_II_III_N domain-containing protein n=1 Tax=c... [more]
A0A1F3BBU4_9BACT1.480e-1628.57Hepar_II_III_N domain-containing protein (Fragment... [more]
A0A2V7Q9Z8_9BACT3.690e-1427.36Hepar_II_III_N domain-containing protein n=1 Tax=G... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18628contigP-wetherbeei_contig18628:9..1031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1519464.HY22_00145
PFAMsHepar_II_III,Hepar_II_III_N
Model size1023
Max annot lvl1090|Chlorobi
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.32e-17
EggNOG OGsCOG5360@1|root,COG5360@2|Bacteria,1FEZ5@1090|Chlorobi
DescriptionHeparinase II/III N-terminus
Cds size1023
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186151.1929116-CDS-P-wetherbeei_contig18628:8..10311683186151.1929116-CDS-P-wetherbeei_contig18628:8..1031Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18628 9..1031 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18628.1.1prot_P-wetherbeei_contig18628.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18628 9..1031 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18628.1.1

>prot_P-wetherbeei_contig18628.1.1 ID=prot_P-wetherbeei_contig18628.1.1|Name=mRNA_P-wetherbeei_contig18628.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=341bp
FHHRLRPHSFVHAGHVESYIEPFKTFPNDCRNIVAQAEKALQHKFSPLGG
EPYEFPHAIDWFGDFQGRSWLYAHVDDLQERLQRPLDEQVAALQQMGPVE
RTWNFNQLGQFVDLGRAYWITDNEPFASEFVVQAVDWGERNQPMYGINWL
YPRMVATRALNWTLSFLMFLGSEQLQGENLSRILRTLLYHGGYLAALLSK
GCKDQLAVAASLYLLAAHFPEFTASRRWLVLAQQSLEEGAGREFAKDGLH
RSASLAMHREATEWLLLVAAFDITNSRAWEPLLRPLEAAVEALAYLRSPA
LLGCEVGAHLCEGLLGRQAGPIEHTRRILAMAAVLLERGDF
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mRNA from alignment at P-wetherbeei_contig18628:9..1031-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18628.1.1 ID=mRNA_P-wetherbeei_contig18628.1.1|Name=mRNA_P-wetherbeei_contig18628.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig18628:9..1031- (Phaeothamnion wetherbeei SAG_119_79)
TTTCACCACCGACTGCGACCCCACTCCTTCGTGCACGCGGGCCACGTCGA GAGCTACATCGAGCCTTTCAAAACCTTTCCCAACGACTGTCGAAATATCG TAGCTCAGGCTGAAAAGGCACTGCAGCACAAGTTTTCTCCTCTGGGCGGA GAGCCCTACGAATTTCCCCACGCCATCGACTGGTTCGGTGATTTTCAGGG CCGTAGCTGGCTCTACGCCCACGTGGACGACTTGCAGGAGCGCCTGCAGC GCCCCCTGGACGAGCAGGTAGCGGCCCTTCAGCAGATGGGCCCGGTGGAG CGCACCTGGAACTTCAACCAGTTGGGCCAGTTCGTCGATCTCGGGCGCGC CTATTGGATCACCGACAATGAGCCGTTTGCCAGCGAGTTCGTTGTCCAGG CCGTGGACTGGGGCGAGCGCAACCAGCCGATGTATGGCATCAACTGGCTC TACCCGCGCATGGTTGCCACCCGCGCCCTCAATTGGACCCTTTCGTTTCT GATGTTCCTGGGCTCCGAGCAGCTCCAGGGGGAAAACCTCAGCCGCATTC TGCGCACCCTTCTCTACCACGGGGGCTATCTGGCTGCTCTCCTCTCCAAA GGCTGCAAAGACCAGCTTGCGGTGGCGGCCAGCCTATATTTGCTGGCTGC CCATTTTCCTGAGTTCACCGCTTCCCGCCGCTGGCTCGTGCTCGCGCAGC AATCTCTGGAGGAAGGCGCGGGCCGCGAGTTTGCCAAGGACGGCCTGCAT CGCTCGGCTTCCCTGGCCATGCATCGAGAGGCCACCGAATGGCTGCTCCT GGTAGCCGCTTTCGACATCACCAACTCGCGCGCGTGGGAGCCGCTGCTGC GCCCCCTGGAGGCCGCCGTGGAAGCGCTGGCCTATCTGCGCTCCCCGGCC CTCCTGGGCTGCGAAGTGGGCGCTCATTTGTGTGAAGGTTTGCTGGGGCG CCAGGCCGGGCCCATCGAGCACACCCGGCGCATCCTGGCGATGGCGGCTG TCCTCCTCGAGCGCGGCGACTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18628:9..1031-

>mRNA_P-wetherbeei_contig18628.1.1 ID=mRNA_P-wetherbeei_contig18628.1.1|Name=mRNA_P-wetherbeei_contig18628.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig18628:9..1031- (Phaeothamnion wetherbeei SAG_119_79)
TTTCACCACCGACTGCGACCCCACTCCTTCGTGCACGCGGGCCACGTCGA
GAGCTACATCGAGCCTTTCAAAACCTTTCCCAACGACTGTCGAAATATCG
TAGCTCAGGCTGAAAAGGCACTGCAGCACAAGTTTTCTCCTCTGGGCGGA
GAGCCCTACGAATTTCCCCACGCCATCGACTGGTTCGGTGATTTTCAGGG
CCGTAGCTGGCTCTACGCCCACGTGGACGACTTGCAGGAGCGCCTGCAGC
GCCCCCTGGACGAGCAGGTAGCGGCCCTTCAGCAGATGGGCCCGGTGGAG
CGCACCTGGAACTTCAACCAGTTGGGCCAGTTCGTCGATCTCGGGCGCGC
CTATTGGATCACCGACAATGAGCCGTTTGCCAGCGAGTTCGTTGTCCAGG
CCGTGGACTGGGGCGAGCGCAACCAGCCGATGTATGGCATCAACTGGCTC
TACCCGCGCATGGTTGCCACCCGCGCCCTCAATTGGACCCTTTCGTTTCT
GATGTTCCTGGGCTCCGAGCAGCTCCAGGGGGAAAACCTCAGCCGCATTC
TGCGCACCCTTCTCTACCACGGGGGCTATCTGGCTGCTCTCCTCTCCAAA
GGCTGCAAAGACCAGCTTGCGGTGGCGGCCAGCCTATATTTGCTGGCTGC
CCATTTTCCTGAGTTCACCGCTTCCCGCCGCTGGCTCGTGCTCGCGCAGC
AATCTCTGGAGGAAGGCGCGGGCCGCGAGTTTGCCAAGGACGGCCTGCAT
CGCTCGGCTTCCCTGGCCATGCATCGAGAGGCCACCGAATGGCTGCTCCT
GGTAGCCGCTTTCGACATCACCAACTCGCGCGCGTGGGAGCCGCTGCTGC
GCCCCCTGGAGGCCGCCGTGGAAGCGCTGGCCTATCTGCGCTCCCCGGCC
CTCCTGGGCTGCGAAGTGGGCGCTCATTTGTGTGAAGGTTTGCTGGGGCG
CCAGGCCGGGCCCATCGAGCACACCCGGCGCATCCTGGCGATGGCGGCTG
TCCTCCTCGAGCGCGGCGACTTC
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