mRNA_P-wetherbeei_contig18615.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18615.1.1
Unique NamemRNA_P-wetherbeei_contig18615.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: A0A239E8L0_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=7 Tax=Tardiphaga TaxID=1395974 RepID=A0A239E8L0_9BRAD)

HSP 1 Score: 568 bits (1465), Expect = 1.960e-203
Identity = 299/328 (91.16%), Postives = 309/328 (94.21%), Query Frame = 1
Query:    1 MTVFAPSRRMLLAGAASSIVVGMTAPAWA-YPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAAQ 981
            MTVFAP+RRMLLAGAASSIVVG T P WA YPDQLIK++VTFPPGGSADIFIRALEPVIAADLKQGF+IENRGGAGG IGMQAVAQAKPDGYTLGVAPAGALTINPHI+P+ SFDPIKDL PI LLADIPFVLVA+ DAPFATLK ALA AAAKPGQLSVGYGGNGTVMHMTAALFLQTTNV LTLVPYRGTGP VTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLP+VPTL EQGV GFESTGWFGLVAPAATP DIVTRLNAAFVKALGD DV+EKLRTIGAQPAP TPEAFAAYIRSE+AKWGRL REMNLAAQ
Sbjct:    1 MTVFAPTRRMLLAGAASSIVVGTTTPVWAAYPDQLIKIVVTFPPGGSADIFIRALEPVIAADLKQGFIIENRGGAGGNIGMQAVAQAKPDGYTLGVAPAGALTINPHISPATSFDPIKDLAPIALLADIPFVLVAAPDAPFATLKEALATAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVKLTLVPYRGTGPAVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPEVPTLDEQGVAGFESTGWFGLVAPAATPGDIVTRLNAAFVKALGDPDVIEKLRTIGAQPAPMTPEAFAAYIRSESAKWGRLTREMNLAAQ 328          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: A0A515KQJ6_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=unclassified Tardiphaga TaxID=2631404 RepID=A0A515KQJ6_9BRAD)

HSP 1 Score: 531 bits (1369), Expect = 7.620e-189
Identity = 279/321 (86.92%), Postives = 295/321 (91.90%), Query Frame = 1
Query:   19 SRRMLLAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAAQ 981
            +RR LLAGAA+SIVVG T  AW YPDQLIK+IVTFPPGGSAD+FIRALEPV+AADLKQGFVIENRGGAGG IGMQAV QAKPDGYTLGV PAGAL+INPH+NPS  FDPIKDL PITLLADIPFVLVA+ADAPFATLK ALAAAAAKPGQLS+GYGGNGTVMHMTAAL LQ+  + LTLVPYRGTGP VTDVLAGHI LAVLDIPSSLELIRAGRLKPLGVTSAKRVPFL +VPTL EQGVTGFESTGWFGLVAPAATPADIV RLN AFVKALGD DV+EKLRTIGAQPAP+T EAFAAYIRSE+AKWGRL R+MNL AQ
Sbjct:    7 TRRTLLAGAATSIVVGATT-AWTYPDQLIKIIVTFPPGGSADMFIRALEPVVAADLKQGFVIENRGGAGGNIGMQAVMQAKPDGYTLGVGPAGALSINPHLNPSTPFDPIKDLAPITLLADIPFVLVANADAPFATLKEALAAAAAKPGQLSIGYGGNGTVMHMTAALLLQSARIKLTLVPYRGTGPVVTDVLAGHISLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLREVPTLDEQGVTGFESTGWFGLVAPAATPADIVARLNGAFVKALGDQDVIEKLRTIGAQPAPSTTEAFAAYIRSESAKWGRLTRDMNLTAQ 326          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: UPI001E5B2701 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Rhodopseudomonas boonkerdii TaxID=475937 RepID=UPI001E5B2701)

HSP 1 Score: 495 bits (1275), Expect = 1.620e-174
Identity = 258/327 (78.90%), Postives = 281/327 (85.93%), Query Frame = 1
Query:    1 MTVFAPSRRMLLAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAAQ 981
            M+ F P+RRMLLAG A+S+  G    + AY +Q  K+IVTFPPGGSADIFIRALEPV+AADLK GFVIENR GAGG IGMQAV QAKPDGYTLGVAPAG LTINPH+N S  FDP+KDL PITLLADIPFVLVA+  A FATLK  +AAAAAKPGQLSVG+GGNGTVM MTAAL  Q  NV LTLVPYRGTGP VTDVLAGH+PLA+LDIPSSLELIR GRL  LGVTS+KRV FLPDVPTLAEQG+ GFESTGWFGLVAPAATP D++TRLNA FVKAL D DV+EKLR IGAQP+PTTP+AFAAYIRSE+AKWGRL REMNLA Q
Sbjct:    1 MSAFHPTRRMLLAGIAASVATGAAMSSSAYAEQFTKIIVTFPPGGSADIFIRALEPVVAADLKSGFVIENRAGAGGNIGMQAVVQAKPDGYTLGVAPAGVLTINPHVNASMPFDPVKDLAPITLLADIPFVLVAAPGASFATLKDMIAAAAAKPGQLSVGHGGNGTVMQMTAALLSQMANVRLTLVPYRGTGPVVTDVLAGHVPLAILDIPSSLELIRTGRLTALGVTSSKRVAFLPDVPTLAEQGLAGFESTGWFGLVAPAATPGDVMTRLNAIFVKALADPDVIEKLRVIGAQPSPTTPDAFAAYIRSESAKWGRLTREMNLAGQ 327          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: UPI001BA87F3F (tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BA87F3F)

HSP 1 Score: 407 bits (1047), Expect = 6.730e-140
Identity = 206/296 (69.59%), Postives = 244/296 (82.43%), Query Frame = 1
Query:   85 AYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNL 972
            AYP+QLIKVIVTFPPGGSADI +RALEPV+AA+LKQGFVIENR GAGG IGM AVAQA+PDGYTLGVAPAGALT+ PH N +  FDP KDL PITLLA+IPFVLVAS + P  ++   +A A AKPG LS+G+GGN T MH+TAALF Q   V++ LVPYRGT P   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+P LPDVPTLAE G+ GFES GWFGLVAPA TP +IV RLNAAFVKALGD  V+EK+RT+GA+PAPT+PE FA +I+SE+AKWG+L+ E  +
Sbjct:   26 AYPEQLIKVIVTFPPGGSADIVMRALEPVVAAELKQGFVIENRAGAGGNIGMAAVAQARPDGYTLGVAPAGALTVTPHFNQTMPFDP-KDLAPITLLAEIPFVLVASGNVPAHSVAETIALARAKPGALSIGHGGNSTAMHLTAALFTQKAGVAMELVPYRGTAPAAVDVLAGHVPFAVLDIPASKQLILEGKLNAIGVSSARRLPTLPDVPTLAESGIGGFESVGWFGLVAPAGTPGEIVARLNAAFVKALGDPSVIEKIRTLGAEPAPTSPEQFARFIQSESAKWGKLVSEAGI 320          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: I2QL17_9BRAD (Uncharacterized protein n=36 Tax=Bradyrhizobiaceae TaxID=41294 RepID=I2QL17_9BRAD)

HSP 1 Score: 407 bits (1046), Expect = 1.060e-139
Identity = 217/321 (67.60%), Postives = 255/321 (79.44%), Query Frame = 1
Query:   19 SRRML-LAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            SRR+L +  AAS  V+ + A   AYP+QLIK+IVTFPPGGSAD  IRALEP++ A+LKQG VIENR GAGG IGM AVAQAKPDGYTLGVAPAG+LT+NPH+N S  FDP KDL PITLLA IPFVLVASAD P  T   A+A A AKPG LS+G+GGN T MH+TAALF Q T +++ LVPYRGT P   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+  LPDVPTLAE G+ GFES GWFGLVAPA TPADIV RLN AF KAL D  VVEK+RT+GA+PAPT+PE F+ +I+SE+AKWG+LI E  + A
Sbjct:    6 SRRILAVLTAASFAVLPLEAGRAAYPEQLIKIIVTFPPGGSADTVIRALEPLVTAELKQGLVIENRAGAGGNIGMAAVAQAKPDGYTLGVAPAGSLTVNPHLNSSMPFDP-KDLAPITLLAKIPFVLVASADVPAHTTAEAIALAKAKPGALSIGHGGNSTAMHLTAALFTQKTGIAMELVPYRGTAPATVDVLAGHVPFAVLDIPASRQLILEGKLNAIGVSSAQRLSSLPDVPTLAESGIAGFESVGWFGLVAPAGTPADIVGRLNEAFGKALKDPSVVEKIRTLGAEPAPTSPEQFSRFIQSESAKWGKLISEAGIKA 325          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: UPI001BA72515 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. JYMT SZCCT0180 TaxID=2807666 RepID=UPI001BA72515)

HSP 1 Score: 401 bits (1031), Expect = 2.020e-137
Identity = 207/315 (65.71%), Postives = 251/315 (79.68%), Query Frame = 1
Query:   34 LAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            LAGAA +++      A AYP+QLIK+IVTFPPGGSADI IRALEP+++ADLKQG VIENR GAGG IGM AVAQAKPDGYTLGVAPAGALT+NPH+ P+  FDP KDL P+TLLA+IPFVLVAS   P  T+   +A A+AKPG+LS+G+GGN T MH+TAALF Q   V + LVPYRGT P   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+P L  VPTL E G+ GFE+ GWFGLVAPA TPADIV RLN AFVKAL D  V+EK++++GA+PAPT+PE FA +I+SE+AKWG+L+ E  + A
Sbjct:   13 LAGAALAVLPSQAGHA-AYPEQLIKIIVTFPPGGSADIVIRALEPLVSADLKQGLVIENRAGAGGNIGMTAVAQAKPDGYTLGVAPAGALTVNPHLGPTMPFDP-KDLVPVTLLAEIPFVLVASEKVPARTVAETIALASAKPGELSIGHGGNSTAMHLTAALFAQKAGVRMGLVPYRGTAPATVDVLAGHVPFAVLDIPASRQLILEGKLNAIGVSSARRIPSLSGVPTLVEGGIAGFEAVGWFGLVAPAGTPADIVARLNEAFVKALKDPSVIEKIQSLGAEPAPTSPEQFARFIQSESAKWGKLVSEAGIKA 325          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: UPI0004B1AEA3 (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI0004B1AEA3)

HSP 1 Score: 401 bits (1030), Expect = 2.860e-137
Identity = 212/325 (65.23%), Postives = 252/325 (77.54%), Query Frame = 1
Query:   10 FAPSRRMLLAGAASSIVVGMTAPAW--AYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            F  +RR +LA   ++   G+   A   AYP+QLIK+IVTFPPGGSAD  IRALEP++ A+LKQG VIENR GAGG IGM AV QAKPDGYTLGVAPAGALT+NPH+NPS  FDP +DL PITLLA+IPFVLVASA+ P  +    +A A AKPG LS+G+GGN T MH+TAALF Q T +++ LVPYRGTGP   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+  LPDVPTLAE GV GFES GWFGLVAPA TPADIV RLN AF KAL D  V EK+RT+GA+PAPT+PE F  +I+SE+ KWG+LI E  + A
Sbjct:    2 FDVARRCILAVLTAATFAGLPLEAAEAAYPEQLIKIIVTFPPGGSADTVIRALEPLVTAELKQGLVIENRAGAGGNIGMAAVVQAKPDGYTLGVAPAGALTVNPHLNPSMPFDP-RDLAPITLLAEIPFVLVASANVPAHSAAETIALAKAKPGALSIGHGGNSTAMHLTAALFTQKTGLAMELVPYRGTGPATVDVLAGHVPFAVLDIPASKQLILDGKLNAIGVSSARRLASLPDVPTLAEGGVAGFESIGWFGLVAPAGTPADIVARLNEAFAKALKDPAVAEKIRTLGAEPAPTSPEQFGRFIQSESTKWGKLISEAGIKA 325          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: A0A1C3UGF7_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=18 Tax=Bradyrhizobium TaxID=374 RepID=A0A1C3UGF7_9BRAD)

HSP 1 Score: 400 bits (1029), Expect = 4.670e-137
Identity = 212/326 (65.03%), Postives = 256/326 (78.53%), Query Frame = 1
Query:    7 VFAPSRRMLLAG--AASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            VF  +RR +LA   AAS  ++ + A A AYP+QLIK+IVTFPPGGSAD  IRALEPV+ A+LKQG VIENR GAGG IGM AVAQAKPDGYTLGVAPAGALT+NPH+N +  F  +KDL PITLLA+IPFVLVASA+ P       +A A A+PG LS+G+GGN T MH+TAALF Q + +++ LVPYRGTGP   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+P LPDVPTLAE G+ GFES GWFGLVAPA TPAD++ RLN AF KAL D  V EK+RT+GA+PAPT+PE F+ +I SE+AKWG+LI E  + A
Sbjct:    6 VFHVARRRILAALTAASFAMLPLAAQA-AYPEQLIKIIVTFPPGGSADTVIRALEPVVTAELKQGLVIENRAGAGGNIGMAAVAQAKPDGYTLGVAPAGALTVNPHLNAAMPFA-LKDLAPITLLAEIPFVLVASANVPARNTAETIALAKARPGALSIGHGGNSTAMHLTAALFTQRSGIAMELVPYRGTGPAAVDVLAGHVPFAVLDIPASRQLILDGKLNAIGVSSARRLPSLPDVPTLAESGIAGFESVGWFGLVAPAGTPADVIGRLNEAFTKALKDPAVAEKIRTLGAEPAPTSPEQFSRFIESESAKWGKLISEAGIKA 329          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: Q89XA6_BRADU (Bll0408 protein n=37 Tax=Bradyrhizobium TaxID=374 RepID=Q89XA6_BRADU)

HSP 1 Score: 399 bits (1025), Expect = 2.500e-136
Identity = 212/326 (65.03%), Postives = 253/326 (77.61%), Query Frame = 1
Query:    7 VFAPSRRMLLA--GAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            VF  +RR +LA    A+  V+ +TA   AYP+QLIK+IVTFPPGGSAD  IRALEP++ A+LKQ  VIENR GAGG IGM AVAQAKPDGYTLGVAPAGALT+NPH+N S  F+ +KDL PITLLA+IPFVLVASA+ P  T    +A A AKPG LS+G+GGN T MH+TAALF Q T +++ LVPYRGT P   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+  LPDVPTLAE G+ GFES GWFGLVAPA TPADIV RLN AF KAL D  V EK+RT+GA+PAP +PE F  +I+SE+AKWG+LI E  + A
Sbjct:   13 VFHVARRRILAVLTVATFAVLPLTAGKAAYPEQLIKIIVTFPPGGSADTVIRALEPLVTAELKQSLVIENRAGAGGNIGMAAVAQAKPDGYTLGVAPAGALTVNPHLNSSMPFE-LKDLAPITLLAEIPFVLVASANIPAHTTAETVALAKAKPGALSIGHGGNSTAMHLTAALFTQRTGIAMELVPYRGTAPATVDVLAGHVPFAVLDIPASKQLILEGKLNAIGVSSARRLASLPDVPTLAESGIAGFESVGWFGLVAPAGTPADIVARLNEAFTKALKDPSVAEKIRTLGAEPAPMSPEQFGRFIQSESAKWGKLISEAGIKA 337          
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Match: A0A1X3G269_9BRAD (ABC transporter substrate-binding protein n=14 Tax=Bradyrhizobium TaxID=374 RepID=A0A1X3G269_9BRAD)

HSP 1 Score: 399 bits (1025), Expect = 2.680e-136
Identity = 212/321 (66.04%), Postives = 254/321 (79.13%), Query Frame = 1
Query:   19 SRRML-LAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIFIRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGALTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAAAAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLAGHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGFESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTTPEAFAAYIRSENAKWGRLIREMNLAA 978
            SRR+L +  AAS  V+ + A    YP+QLIK+IVTFPPGGSAD  IRALEP++ A+LKQG VIENR GAGG IGM AVAQAKPDGYTLG+APAG+LT+NPH+N S  FDP KDL PITLLA IPFVLVASA+    T+  ++A A AKPG LSVG+GGN T MH+TAALF Q T +++ LVPYRGT P   DVLAGH+P AVLDIP+S +LI  G+L  +GV+SA+R+  LPDVPTLAE G+ GFES GWFGLVAPA TPADIV RLN AF KAL D  VVEK+RT+GA+PAPT+PE F+ +I+SE++KWG+LI E  + A
Sbjct:   20 SRRILAVLTAASFAVLPLEAVRAVYPEQLIKIIVTFPPGGSADTVIRALEPLVTAELKQGLVIENRAGAGGNIGMAAVAQAKPDGYTLGIAPAGSLTVNPHLNSSMPFDP-KDLAPITLLAKIPFVLVASANVSAHTVAESIALAKAKPGALSVGHGGNSTAMHLTAALFTQKTGIAMELVPYRGTAPATVDVLAGHVPFAVLDIPASRQLILEGKLNAIGVSSAQRLSSLPDVPTLAESGIAGFESVGWFGLVAPAGTPADIVGRLNEAFGKALKDPSVVEKIRTLGAEPAPTSPEEFSRFIQSESSKWGKLISEAGIKA 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18615.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A239E8L0_9BRAD1.960e-20391.16Tripartite-type tricarboxylate transporter, recept... [more]
A0A515KQJ6_9BRAD7.620e-18986.92Tripartite tricarboxylate transporter substrate bi... [more]
UPI001E5B27011.620e-17478.90tripartite tricarboxylate transporter substrate bi... [more]
UPI001BA87F3F6.730e-14069.59tripartite tricarboxylate transporter substrate bi... [more]
I2QL17_9BRAD1.060e-13967.60Uncharacterized protein n=36 Tax=Bradyrhizobiaceae... [more]
UPI001BA725152.020e-13765.71tripartite tricarboxylate transporter substrate bi... [more]
UPI0004B1AEA32.860e-13765.23tripartite tricarboxylate transporter substrate bi... [more]
A0A1C3UGF7_9BRAD4.670e-13765.03Tripartite-type tricarboxylate transporter, recept... [more]
Q89XA6_BRADU2.500e-13665.03Bll0408 protein n=37 Tax=Bradyrhizobium TaxID=374 ... [more]
A0A1X3G269_9BRAD2.680e-13666.04ABC transporter substrate-binding protein n=14 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18615contigP-wetherbeei_contig18615:206..1189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog443598.AUFA01000025_gene1852
PFAMsTctC
Model size984
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.7e-142
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2U0WM@28211|Alphaproteobacteria,3JVFM@41294|Bradyrhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size984
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186150.7987392-CDS-P-wetherbeei_contig18615:205..11891683186150.7987392-CDS-P-wetherbeei_contig18615:205..1189Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18615 206..1189 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18615.1.1prot_P-wetherbeei_contig18615.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18615 206..1189 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18615.1.1

>prot_P-wetherbeei_contig18615.1.1 ID=prot_P-wetherbeei_contig18615.1.1|Name=mRNA_P-wetherbeei_contig18615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp
MTVFAPSRRMLLAGAASSIVVGMTAPAWAYPDQLIKVIVTFPPGGSADIF
IRALEPVIAADLKQGFVIENRGGAGGMIGMQAVAQAKPDGYTLGVAPAGA
LTINPHINPSPSFDPIKDLTPITLLADIPFVLVASADAPFATLKGALAAA
AAKPGQLSVGYGGNGTVMHMTAALFLQTTNVSLTLVPYRGTGPTVTDVLA
GHIPLAVLDIPSSLELIRAGRLKPLGVTSAKRVPFLPDVPTLAEQGVTGF
ESTGWFGLVAPAATPADIVTRLNAAFVKALGDTDVVEKLRTIGAQPAPTT
PEAFAAYIRSENAKWGRLIREMNLAAQ*
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mRNA from alignment at P-wetherbeei_contig18615:206..1189+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18615.1.1 ID=mRNA_P-wetherbeei_contig18615.1.1|Name=mRNA_P-wetherbeei_contig18615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig18615:206..1189+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGTGTTCGCTCCTAGCCGCAGGATGCTGCTCGCGGGCGCAGCCAG TTCGATCGTGGTCGGGATGACGGCGCCTGCATGGGCCTATCCCGACCAGC TTATCAAAGTCATCGTCACGTTTCCGCCGGGCGGCAGCGCCGATATCTTT ATTCGTGCACTTGAACCGGTGATCGCTGCGGATTTGAAGCAAGGCTTCGT CATCGAAAATCGCGGCGGTGCGGGCGGCATGATCGGTATGCAGGCGGTGG CGCAGGCCAAGCCCGATGGCTACACCCTCGGCGTGGCGCCGGCAGGCGCA TTGACCATCAACCCTCACATCAATCCGTCGCCGTCTTTCGATCCTATCAA GGATCTGACGCCGATTACACTGCTCGCCGACATCCCGTTTGTCCTGGTCG CATCGGCTGACGCCCCATTTGCCACGCTGAAAGGGGCGCTTGCGGCCGCT GCCGCAAAGCCCGGGCAGCTATCGGTGGGATATGGCGGCAACGGCACCGT GATGCACATGACGGCTGCGCTGTTTCTGCAAACGACGAATGTCAGCCTGA CTCTGGTCCCCTATCGGGGCACAGGGCCTACGGTGACCGATGTCCTTGCC GGGCATATCCCGCTTGCGGTTCTGGACATCCCGAGTTCGCTGGAATTGAT CCGTGCCGGCCGGCTGAAACCGCTCGGCGTCACCAGCGCCAAGCGCGTGC CGTTCCTCCCCGACGTGCCCACACTTGCCGAGCAAGGCGTCACCGGCTTT GAATCGACTGGCTGGTTCGGCCTCGTCGCGCCCGCTGCGACACCTGCCGA CATCGTGACACGGTTGAATGCCGCGTTCGTCAAGGCGCTGGGAGATACGG ACGTGGTCGAGAAGCTGCGGACGATCGGCGCGCAGCCGGCGCCCACGACG CCGGAAGCCTTCGCCGCCTATATCCGCTCGGAAAACGCCAAATGGGGACG CCTCATACGGGAGATGAACCTCGCGGCGCAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18615:206..1189+

>mRNA_P-wetherbeei_contig18615.1.1 ID=mRNA_P-wetherbeei_contig18615.1.1|Name=mRNA_P-wetherbeei_contig18615.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig18615:206..1189+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGTGTTCGCTCCTAGCCGCAGGATGCTGCTCGCGGGCGCAGCCAG
TTCGATCGTGGTCGGGATGACGGCGCCTGCATGGGCCTATCCCGACCAGC
TTATCAAAGTCATCGTCACGTTTCCGCCGGGCGGCAGCGCCGATATCTTT
ATTCGTGCACTTGAACCGGTGATCGCTGCGGATTTGAAGCAAGGCTTCGT
CATCGAAAATCGCGGCGGTGCGGGCGGCATGATCGGTATGCAGGCGGTGG
CGCAGGCCAAGCCCGATGGCTACACCCTCGGCGTGGCGCCGGCAGGCGCA
TTGACCATCAACCCTCACATCAATCCGTCGCCGTCTTTCGATCCTATCAA
GGATCTGACGCCGATTACACTGCTCGCCGACATCCCGTTTGTCCTGGTCG
CATCGGCTGACGCCCCATTTGCCACGCTGAAAGGGGCGCTTGCGGCCGCT
GCCGCAAAGCCCGGGCAGCTATCGGTGGGATATGGCGGCAACGGCACCGT
GATGCACATGACGGCTGCGCTGTTTCTGCAAACGACGAATGTCAGCCTGA
CTCTGGTCCCCTATCGGGGCACAGGGCCTACGGTGACCGATGTCCTTGCC
GGGCATATCCCGCTTGCGGTTCTGGACATCCCGAGTTCGCTGGAATTGAT
CCGTGCCGGCCGGCTGAAACCGCTCGGCGTCACCAGCGCCAAGCGCGTGC
CGTTCCTCCCCGACGTGCCCACACTTGCCGAGCAAGGCGTCACCGGCTTT
GAATCGACTGGCTGGTTCGGCCTCGTCGCGCCCGCTGCGACACCTGCCGA
CATCGTGACACGGTTGAATGCCGCGTTCGTCAAGGCGCTGGGAGATACGG
ACGTGGTCGAGAAGCTGCGGACGATCGGCGCGCAGCCGGCGCCCACGACG
CCGGAAGCCTTCGCCGCCTATATCCGCTCGGAAAACGCCAAATGGGGACG
CCTCATACGGGAGATGAACCTCGCGGCGCAATGA
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