prot_P-wetherbeei_contig1859.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1859.1.1
Unique Nameprot_P-wetherbeei_contig1859.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length552
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1859.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 169..225
e-value: 4.4E-8
score: 33.7
coord: 253..310
e-value: 8.8E-6
score: 26.3
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 77..134
score: 10.701128
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 169..222
score: 11.727738
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 251..298
score: 11.312946
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 482..537
score: 10.182638
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 174..232
e-value: 4.1E-7
score: 32.2
coord: 511..552
e-value: 8.9E-6
score: 28.0
coord: 115..173
e-value: 4.7E-9
score: 38.5
coord: 287..344
e-value: 2.7E-5
score: 26.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 233..286
e-value: 9.5E-8
score: 33.9
coord: 55..114
e-value: 1.4E-7
score: 33.4
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 141..226
coord: 234..327
coord: 59..141
coord: 472..551
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 59..120
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 233..305
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 120..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1859contigP-wetherbeei_contig1859:3999..6073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1859.1.1mRNA_P-wetherbeei_contig1859.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1859 3999..6073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1859.1.1 ID=prot_P-wetherbeei_contig1859.1.1|Name=mRNA_P-wetherbeei_contig1859.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=552bp
WYLPFETLVSAVDATGETALDLARRVGHADVAALLEDASNRVAEWHARAA
VIGRAAERVDCPLGCGKPCRRDRLEGHVIGHCRLRRVPCPGNSGYGSCGA
MVVAEAVARHMLSECPKRSVPCPNWGFGCTSHFPAHAANVHALHRCPYRR
LPCRRGCGAIVAAREREPHESDTCPLSVHPCPRGCGAAAVERRAAGAHAA
ACPRRPARCRFGCGRCMPHEELDVHYETVCRRPCRWPGCGVRVAPAAKLD
AHERLTCPFRPVSCPHAGCPNGPMPAKTLEEHAMQRCAARPTACPRGCGA
VLKAAAVAAHVVAESGDCPERLMRCRLDCLHRRIVVSTSDCSAEAVPVVE
RTAAPGSVSLPPESFSEVSLPLPSTAVTASIVTVARAAEPADEGLKVENA
SEDATQTAEAMRLPGMEMALLQEYDDVSGAFLISYPHRVVWQRLAGFGII
YGSAVATIATISAADAAAGWRCGWIPASAMAVHLAGACPLRRGPCKAGCG
QHVVAADAERHFRDRCVKRTVACALGCGKRLPADTAEEHAARQCPLREVP
CD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR043211TNF_rcpt-assoc_TRAF