mRNA_P-wetherbeei_contig1857.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: D8LDP3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP3_ECTSI) HSP 1 Score: 318 bits (814), Expect = 2.010e-86 Identity = 414/1383 (29.93%), Postives = 558/1383 (40.35%), Query Frame = 1
Query: 1 VLYDDARFSYFLDFLSLHNQAHKLLFWFEVEQFKLLAGNATEMLARQESLWEKYFAAAEQNAAXXXXXXXXXGSSGD-----GSGALPCGYLFCVAQAFAYRELRDQRGGAEGLAAALGHLLEESGRFRERLLTSSVHVR----QETRNLIAQR-----------LGALK-GYASTLPLNGTAARGHEVDAVRTAVQGLGDVLLQAQQQAYRSLERELLPALRRSPTFAAFVEDMFSMDLERDLARRSAGADVDSAKGSLSPPPPRQRANGAAVLGPGPE-VAGAEPPLAPPAGLSPQPRQQSSDXXXXXXXXXXXXXQSLLPLPRPSARIPPAQQQPXXXXXXXXXXXXXGIAGAHRLSNRGXXXXXXXXXXXXXSAGTMTRRFRTHVKQLRHLTVARAVRPAGHIPFPGQPPCTLATPCSTKGAXXXXXXXXXXXXRRGLGATHVGVGLPPGAAADRKH--VRAHLNAALLELMEADLLDALPGYCLPGPVAAVA-------------------------------------------HAAAVRMVGAAGVA-ACRALAPSMHHFIMTLPRKRKQPLHAVAARAXXXXXXXXXXXXXXXSRGGKDGAGKDGXXXXEGDSCRP--SPQVSPRRRRVQ-----TVPVAVDRATNFVLHGVCMTTWFEAPPPLA----LSSIESVGHD---------AIFLPRCLCAISVDPLFDTLRAIVLELAGGRAPTGLAATLPSSPSDNVGGGSRRS-------------------DPEARAGATAGDAESKRPSSGTSTKGNSGNSALWRAKKGEPPL-----------------------RESGSEALLTLLAPPAVC----APR---GW--------------PF-----------------GD----GCTAASHP-----DFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLPAAEVYPFWRLKALEERGDRQSSPPPQTILGGGRSXXXXXXXXXXXXXGSGETPSGTPSPTRRTRPTQPPR----PYFVGLEARLVQAALGEPRDAALPPPMXXXXXGGVGGIGVADWPGSVGRGRXXXXXXXLQPTLVWGVRTRESCLA--AAREDPGRCSSHATQPSDATLECTRRIVARAVHVDLDADEVTLP-----------------------LGASE-------------------LGMALPP-WPAEPLAAAQRRAQLALFPEFYTFDAVTPAVPAAAPAFGDALRAHRLSG--DCSGGGGDSGSGCGSSWRQQMPA-GPDATRSGGRTAAVDGNGRPDPESAARMYRPTDPDRLLRAAFLGLLLGVLGRVKEFLTAFPEHGVVRFDTGAFLEA 3462
+L+D RFSYFLD+LS+H QAHKLLFWFE+EQFKLLAG+ + + E+L+ KYF + + G + G G P G +F + Q F Y+ ++ G G L +L EE +FR+ L + VR + + L+ +R LGAL G S P G + +++RTAV GL D LL A+ Q YR LE ++PAL +S TF FV+D+ S++++ + A + G D D G +P P A G +LG P + G A PA SP + + Q R S R PP P +A R S +G XXXXXX G + RRFRT V+Q+RH+ AR ++ G P + P S L + G+ A++D + VR+ LN +LELM A++ +ALP YCLP +A V +R G G A A+ P +HHF+MT+PRKR P + + ++GAG XXXX R + Q S RR + T P A+DR +N VLHG C+T W +A L +S D ++PRC+CA+S DPLFDTLRA+ L GG T A + GGG S +G + G++A +A G PPL R++G +A TL PP + AP GW P+ GD G +A P D P+ PLF+ALS DN+ L AL ERPV+V+ S R+ +++A +L+ALLHPL WHHAY PLLPAAEV + AL G S PP+ G SG G+P PR P+ VGL+ LV+ A+ + GG G GV P G VWGV + E+C+ A E+ G TQPS A LE R +V ++VHVDLD D++T P LG+ + + PP WP E A+R + LFP+F TFD V D L S CSG SG G +S R ++ A A + V G ES MY PT D LRAA GL+ VLGRVKEF T F + G++RFDT F++A
Sbjct: 9 ILHDQNRFSYFLDYLSVHAQAHKLLFWFEIEQFKLLAGD--DRGSHPENLFRKYFRERPRGSPGGLELPPYPGEHTEVLYPKGKGKPP-GDMFELPQTFLYQGKSLEKRGVPGSTKQLSNLEEEGMKFRDAYLEGTEVVRSPLDKTVKALLVKRIFGLIGCKPTGLGALGVGSMSGGPGGGGKSGAIYTESLRTAVSGLNDALLSAEDQVYRPLEEAVVPALVKSSTFGNFVDDLSSLEVDTEEA--TDGEDNDDDTGPPAPAP--SGAKGGTILGQAPRGLHGVAAIAATPAPGSPDSATKRAAATATAALPMKGRGQGR----RGSVRSPPRPSGPPRAYGSPTDGAGR-MASPARSSPQGVPPGAGEXXXXXXX-GRLLRRFRTKVRQMRHVIAARVLQDMPPRKTGGGDP---SVPRSDSAWGWDGEEGEGGEDE--LEDVELLAGM---ASSDTNYAEVRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRTLPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXXLRHHGERGDGEAAEAMLPRVHHFVMTVPRKRSSPSVSPRVGSPSRMSTGRGGGGEGSXXXXREGAGXXXXXXXXXXXXRKGVNRQESDRRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKADSDEGDEGDLWGRDSDDDDEEDGARAKTTAYVPRCVCALSFDPLFDTLRAVALA-RGGHPETARALMV-----GRGGGGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAGLRLEWGLGDAATLKA--GRPPLPILPPPPPTPGPTLPSVFAPSLSRDAGGDAARTLRKPPPLVQSNSAPDSMGGWSSTGEGGYSTEEEGPWRGXXXXXXXXXAIGGRSGDRIAGGLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVA-LDKKTALNHGG---SGSPPRLTPGS--------------WGPSGRGGRGSPGXXXXXXXXXTPRVRATPFLVGLDGELVRMAMRK---------------GGGSGKGVKAGPAGPGE--------------VWGVASSEACMVPEGAEEEAGASGIATTQPSPALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDTPPAEEGEGGGTAKTDSLGSGKEXXXXXXXXXXXXXXXXXXXXVGAPPVWPEEAARRARRVVKSTLFPDFETFDVV------------DDLDXDDDSALFKCSG---LSGGGVEASLRDKVEACRTSAAAASAPRRGVSGGAGTLTESIVGMYIPTTADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKA 1300
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A6H5JQ29_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ29_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.430e-49 Identity = 266/930 (28.60%), Postives = 341/930 (36.67%), Query Frame = 1
Query: 1318 VRAHLNAALLELMEADLLDALPGYCLPGPVAAVA------HAAAVRMV----------------------------------------GAAGVA-ACRALAPSMHHFIMTLPRKRKQPLHAVAARAXXXXXXXXXXXXXXXSRGGKDGAGKDGXXXXEGDSCRPSPQVSPRRRRVQ-------TVPVAVDRATNFVLHGVCMTTWFEAPPP-------LALSSIESVGHDAI------FLPRCLCAISVDPLFDTLRAIVLELAGGRAPTGLAATLPSSPSDNVGGGSRRSDPEARAGATAGDAESKRP--------------------SSGTSTKGNSGNSALWRAKKGEPPL-----------------------RESGSEALLTLLAPPAVC----APR---GWPF-----------------------------------GDGCTAASHP-----DFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLPAAEVYPFWRLKALEERGDRQSSPPPQTILGGGRSXXXXXXXXXXXXXGSGETPSGTPS------PTRRTRPTQPPRPYFVGLEARLVQAALGEPRDAALPPPMXXXXXGGVGGIGVADWPGSVGRGRXXXXXXXLQPTLVWGVRTRESCLA--AAREDPGRCSSHATQPSDATLECTRRIVARAVHVDLDADEVTLP-----------------------LGASE--------------------------LGMALPPWPAEPLAAAQRRAQLALFPEFYTFDAVTPAVPAAAPAFGDALRAHRLSGDCSGGGGDSGSGCGSSWRQQMPA-GPDATRSGGRTAAVDGNGRPDPESAARMYRPTDPDRLLRAAFLGLLLGVLGRVKEFLTAFPEHGVVRFDTGAFLEA 3462
VR+ LN +LELM A++ +ALP YCLP +A V A+ V G G A A+ P +HHF+MT+PRKR G XXXX D R + RR T P A+DR +N VLHG C+T W +A S D ++PRC+CA+S DPLFDTLRA+ L GG T A + GGG S +G + G++A +A G PPL RE+G +A L PP + AP GW F +A P D P+ PLF+ALS DN+ L AL ERPV+V+ S R+ +++A +L+ALLHPL WHHAY PLLPAAEV FWR K ++ +T L GRS SG G+P PT R R T P+ VGL+ LV+ A+ GG G GV VWGV + E C+ A E+ G TQPS A LE R IV ++VHVDLD D++T P LG+ + +G+ L WP E A+R Q LFP+F TFD V+ P F L CSG SG G +S R ++ A A + + G ES MY PT D LRAA GL+ VLGRVKEF T F + G++RFDT F++A
Sbjct: 11 VRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSSSSSLXXXXXXXXXXXXXXXXXLPLPPLPHHGERGDGEAAEAMLPRVHHFVMTVPRKRT-------------------------------GGXXXXXXXXXXDGSRKGVNLQESERRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKADSDEDDEGDLWGRDSDXXXXEDGTRAKTTAYVPRCVCALSFDPLFDTLRAVALA-RGGHPETARALMV-----GRGGGGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKAGMRLEWGLGDAATLKA--GRPPLPILPPPPPNPGPTLPSLFAPSLSREAGGDATGMLRNPPPLVQSNSAPDSMGGWSFTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDK---------KTALNHGRSGSPPRITPGSWGA-SGRGGRGSPGXXXXPPPTPRVRAT----PFLVGLDGELVRMAMRN---------------GGGSGKGV-----------------------VWGVASSEPCMVPEGAEEEAGASGIATTQPSPALLEVVRCIVKQSVHVDLDHDDITWPPPQAPDPSTAXXXXXXXXSKTDSLGSGKEKKKGXEEAAGATGDEGXXXXXXXXXVGVPLV-WPEEAARRARRVVQSTLFPDFETFDVVSE-TPPQVDDFDXXXXXSALF-KCSG---LSGGGAEASLRDKVEACRTSAAAASASRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQAGLMRFDTAGFVKA 843
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A6H5JUK7_9PHAE (RGS domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK7_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.150e-16 Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 1
Query: 1 VLYDDARFSYFLDFLSLHNQAHKLLFWFEVEQFKLLAGNATEMLARQESLWEKYFAAAEQNAAXXXXXXXXXGSSGD----GSGALPCGYLFCVAQAFAYRELRDQ 306
+L+D RFSYFLD+LS+H QAHKLLFWFE+EQ+KLLAG+ EM + QE+++ KYF + A + + P GY+F VAQAF Y+ELRD+
Sbjct: 25 ILHDQNRFSYFLDYLSVHAQAHKLLFWFEIEQYKLLAGDDREMASHQETIFGKYFGDGARGGAGGLELPPYAVEHTEVLYAKARGRPLGYMFDVAQAFVYQELRDR 130
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A3R7E882_9STRA (UDENN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7E882_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.410e-6 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 2128 GSEALLTLLAPPAVCAPRGWPFGDGCTAASHPDFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
GS L TL AP R P D DF L LF+ L V NI T+ A +E +++ S T +A+ E+LR +LHPL+W H Y+P+LP
Sbjct: 50 GSSMLSTLTAPLRTAGWRHLP--DRLPGI---DFSLSLLFDTLDVANIITLFTAALVECRILLISSQLTVLAVVAESLRTILHPLKWPHVYLPVLP 140
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: B8C8Y1_THAPS (UDENN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8Y1_THAPS) HSP 1 Score: 62.4 bits (150), Expect = 6.460e-6 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 2230 PLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
P LF+ L V+N+ TV ALALER V+V+ + + + CE L +LL P++W HAY+P+LP
Sbjct: 684 PFSHLFQCLDVENVLTVWTALALERQVLVTSTQLSLLTTCCEILLSLLFPMKWSHAYIPVLP 745
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: W4F7V1_9STRA (UDENN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F7V1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 7.510e-6 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 2128 GSEALLTLLAPPAVCAPRGWPFGDGCTAASHPDFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
GS L TL AP R P D DF L LF+ L V NI T+ A +E +++ S T +A+ E+LR +LHPL+W H Y+P+LP
Sbjct: 61 GSSMLSTLTAPLRTAGWRHLP--DRLPGI---DFSLSLLFDTLDVANIITLFTAALVECRLLLISSQLTVLAVVAESLRTILHPLKWPHVYLPVLP 151
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A1E7EPW7_9STRA (DENN-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPW7_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.880e-5 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 2230 PLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLPAA 2421
P LF L +DNI V L LER V+++ + R+ + E L ++L P+RW HAY+PLLP A
Sbjct: 280 PFSDLFSCLDIDNIILVWHCLVLERQVILTSTQRSILTTCAEILLSMLFPMRWSHAYIPLLPKA 343
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A396ZZV6_9STRA (UDENN domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZZV6_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.430e-5 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 2128 GSEALLTLLAPPAVCAPRGWPFGDGCTAASHPDFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
GS L TL AP R P D DF L LF+ L V NI T+ A +E +++ S T +A+ E+LR +LHPL+W H Y+P+LP
Sbjct: 502 GSSMLSTLTAPLRTAGWRHLP--DRLPGI---DFSLSLLFDTLDVANIITLFTAALVECRILLISSQLTVLAVVAESLRTILHPLKWPHVYLPVLP 592
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A3L6VGN2_9STRA (UDENN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VGN2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.480e-5 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 2128 GSEALLTLLAPPAVCAPRGWPFGDGCTAASHPDFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
GS L TL AP R P D DF L LF+ L V NI T+ A +E +++ S T +A+ E+LR +LHPL+W H Y+P+LP
Sbjct: 597 GSSMLSTLTAPLRTAGWRHLP--DRLPGI---DFSLSLLFDTLDVANIITLFTAALVECRILLISSQLTVLAVVAESLRTILHPLKWPHVYLPVLP 687
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Match: A0A3R7AHX6_9STRA (UDENN domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AHX6_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.920e-5 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 2128 GSEALLTLLAPPAVCAPRGWPFGDGCTAASHPDFPLRPLFEALSVDNIFTVLRALALERPVVVSGSARTAVAMACEALRALLHPLRWHHAYVPLLP 2415
GS L TL AP R P D DF L LF+ L V NI T+ A +E +++ S T +A+ E+LR +LHPL+W H Y+P+LP
Sbjct: 674 GSSMLSTLTAPLRTAGWRHLP--DRLPGI---DFSLSLLFDTLDVANIITLFTAALVECRILLISSQLTVLAVVAESLRTILHPLKWPHVYLPVLP 764 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1857.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1857.2.1 >prot_P-wetherbeei_contig1857.2.1 ID=prot_P-wetherbeei_contig1857.2.1|Name=mRNA_P-wetherbeei_contig1857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1154bp VLYDDARFSYFLDFLSLHNQAHKLLFWFEVEQFKLLAGNATEMLARQESLback to top mRNA from alignment at P-wetherbeei_contig1857:899..5608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1857.2.1 ID=mRNA_P-wetherbeei_contig1857.2.1|Name=mRNA_P-wetherbeei_contig1857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4710bp|location=Sequence derived from alignment at P-wetherbeei_contig1857:899..5608+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1857:899..5608+ >mRNA_P-wetherbeei_contig1857.2.1 ID=mRNA_P-wetherbeei_contig1857.2.1|Name=mRNA_P-wetherbeei_contig1857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3462bp|location=Sequence derived from alignment at P-wetherbeei_contig1857:899..5608+ (Phaeothamnion wetherbeei SAG_119_79)back to top |