mRNA_P-wetherbeei_contig18557.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18557.1.1
Unique NamemRNA_P-wetherbeei_contig18557.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A1D8AXE5_9BACT (Macrolide export ATP-binding/permease protein MacB n=2 Tax=Lacunisphaera limnophila TaxID=1838286 RepID=A0A1D8AXE5_9BACT)

HSP 1 Score: 443 bits (1139), Expect = 3.070e-156
Identity = 227/253 (89.72%), Postives = 237/253 (93.68%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            MS++VQLE IHKIY+SGEVPVHAVRGVTL IGAGEFVA+MGASGSGKST+MNLLGCLDRPT+GRY LGGTDVS LDRNQLADLRNQKLGFVFQGFNLLSRTTA ENVELPMLYGRR F+SKE+ DRAL SLDIVGLS RADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLN+QGITIVMVTHELDIAHYCKRNLIMRDG+LVSD  V  RL A  EMKRILDAEAAAKLTA
Sbjct:    1 MSAIVQLEAIHKIYESGEVPVHAVRGVTLDIGAGEFVAIMGASGSGKSTLMNLLGCLDRPTRGRYLLGGTDVSGLDRNQLADLRNQKLGFVFQGFNLLSRTTARENVELPMLYGRRRFSSKEIHDRALRSLDIVGLSPRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNEQGITIVMVTHELDIAHYCKRNLIMRDGQLVSDTAVAGRLTAAVEMKRILDAEAAAKLTA 253          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A4Q1CA00_9BACT (ABC transporter ATP-binding protein n=1 Tax=Oleiharenicola lentus TaxID=2508720 RepID=A0A4Q1CA00_9BACT)

HSP 1 Score: 425 bits (1093), Expect = 3.130e-149
Identity = 216/253 (85.38%), Postives = 235/253 (92.89%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            M+ VVQL+EIHKIYDSGE+PVHAVRGVTLTI  GEFVAVMGASGSGKST+MN+LGCLDRPTKGRY L GTDVS L+RNQLADLRNQKLGFVFQGFNLL+RTTA ENVELPMLYG+ H +S+E+  RAL SLD+VGL++RADHFP+QLSGGQQQRVAIARALINEPQ+LLADEPTGNLDSKTSVEIMGVFQKLN+QGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQV NRLIAT EM ++  AEA AKLTA
Sbjct:    1 MTPVVQLDEIHKIYDSGEIPVHAVRGVTLTIQRGEFVAVMGASGSGKSTLMNVLGCLDRPTKGRYLLDGTDVSGLNRNQLADLRNQKLGFVFQGFNLLARTTARENVELPMLYGQHHLSSREIHQRALKSLDLVGLAKRADHFPNQLSGGQQQRVAIARALINEPQVLLADEPTGNLDSKTSVEIMGVFQKLNEQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVGNRLIATHEMAKLQAAEAEAKLTA 253          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A8J7VC71_9BACT (ABC transporter ATP-binding protein n=1 Tax=Candidatus Didemnitutus sp. TaxID=2814259 RepID=A0A8J7VC71_9BACT)

HSP 1 Score: 425 bits (1092), Expect = 4.450e-149
Identity = 217/253 (85.77%), Postives = 236/253 (93.28%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            MS+VVQLEEIHKIYDSGE+PVHAVRGV+L I  GEFVAVMGASGSGKST+MNLLGCLDRPTKGRY L GTDVSAL RNQLAD+RNQKLGFVFQGFNLLSRTTALENVELPMLY  R  TS+++RDRA+ SL++VGL +RADHFPSQLSGGQQQRVAIARALIN+PQILLADEPTGNLDSKTSVEIM VFQKLN+QGITIVMVTHELDIA YCKRNLIMRDGRLVSDV+V +RL AT E+++ILDAEAAAKLTA
Sbjct:    1 MSAVVQLEEIHKIYDSGEIPVHAVRGVSLAIARGEFVAVMGASGSGKSTLMNLLGCLDRPTKGRYLLDGTDVSALGRNQLADIRNQKLGFVFQGFNLLSRTTALENVELPMLYSVRRMTSRQMRDRAMQSLELVGLGKRADHFPSQLSGGQQQRVAIARALINDPQILLADEPTGNLDSKTSVEIMDVFQKLNEQGITIVMVTHELDIARYCKRNLIMRDGRLVSDVRVTDRLTATVELQKILDAEAAAKLTA 253          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A2A2RWE7_9BACT (Macrolide ABC transporter ATP-binding protein n=1 Tax=Opitutae bacterium Tous-C10FEB TaxID=1982318 RepID=A0A2A2RWE7_9BACT)

HSP 1 Score: 423 bits (1087), Expect = 2.570e-148
Identity = 215/253 (84.98%), Postives = 234/253 (92.49%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            MS VVQLE+IHK Y+SGEVPV AV+GVTLTI  GEFVA+MGASGSGKST+MNLLGCLDRPT+GRY LGGTDVS LDRN+LADLRNQKLGF+FQGFNLLSRTTALENVELPMLYGRRHF+++E+R+RA  SLDIVGLS RADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLN QGIT+VMVTHELDIAHYCKRNLIMRDGRLVSD  V +RL+AT +M+RI+ AE  AKL A
Sbjct:    1 MSHVVQLEDIHKTYESGEVPVLAVQGVTLTITGGEFVAIMGASGSGKSTLMNLLGCLDRPTRGRYLLGGTDVSNLDRNELADLRNQKLGFIFQGFNLLSRTTALENVELPMLYGRRHFSTREIRERARQSLDIVGLSNRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNAQGITVVMVTHELDIAHYCKRNLIMRDGRLVSDTPVVDRLVATEQMQRIVTAETDAKLIA 253          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A1H1TZT1_9BACT (Putative ABC transport system ATP-binding protein n=1 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1TZT1_9BACT)

HSP 1 Score: 405 bits (1041), Expect = 2.800e-141
Identity = 198/252 (78.57%), Postives = 231/252 (91.67%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLT 756
            M+ VVQL++IHKIYDSGEV VHAVRG++L +  GEF+A+MGASGSGKST+MN LGCLDRPTKG Y L G DVS LDRNQLADLRN+KLGFVFQGFNLL+RTTALENVELPMLYG+   +S ++R+RA+H LDIVGL+ RADHFPSQLSGGQQQRVAIARAL+NEPQ+LLADEPTGNLDSKTS+E++GVFQ+LNDQGITIVMVTHELDIAHYC+RNLI+RDG++V+D+QV NR IA  E+K+IL+AEAAAKLT
Sbjct:    1 MAPVVQLKDIHKIYDSGEVKVHAVRGISLELQRGEFMAIMGASGSGKSTLMNTLGCLDRPTKGTYLLDGVDVSGLDRNQLADLRNEKLGFVFQGFNLLARTTALENVELPMLYGKHRGSSAKLRERAMHCLDIVGLANRADHFPSQLSGGQQQRVAIARALVNEPQVLLADEPTGNLDSKTSIEVLGVFQQLNDQGITIVMVTHELDIAHYCRRNLIVRDGKVVNDIQVANRFIADVELKKILEAEAAAKLT 252          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A2A2Q715_9BACT (Macrolide ABC transporter ATP-binding protein n=1 Tax=Opitutae bacterium Tous-C1TDCM TaxID=1982319 RepID=A0A2A2Q715_9BACT)

HSP 1 Score: 394 bits (1013), Expect = 5.730e-137
Identity = 200/254 (78.74%), Postives = 226/254 (88.98%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGR-RHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            M  VVQ+++IHKIY+SGEVPVHAVRGV+L I  GEFVA+MGASGSGKST+MN+LGCLDRPTKG Y L G D+  LDRN+LADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGR R  ++ E+R+RA+H LDIVGLSQR DHFP+QLSGGQQQRVAIAR L+N PQ+LLADEPTGNLDSKTSVE+MGVFQKLN+QGITIVMVTHELDIAHYCKRNLI+RDG +V D  V++RLIA  EM ++  AEAAAKLTA
Sbjct:    1 MPPVVQIKDIHKIYESGEVPVHAVRGVSLDIQRGEFVALMGASGSGKSTLMNMLGCLDRPTKGTYLLDGIDIDKLDRNELADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRHRKVSTAEIRERAMHCLDIVGLSQRFDHFPNQLSGGQQQRVAIARGLVNSPQVLLADEPTGNLDSKTSVEVMGVFQKLNEQGITIVMVTHELDIAHYCKRNLILRDGVVVRDEAVKDRLIAEQEMGKLKQAEAAAKLTA 254          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A3E1EFX2_9BACT (Putative ABC transport system ATP-binding protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EFX2_9BACT)

HSP 1 Score: 394 bits (1011), Expect = 9.670e-137
Identity = 193/253 (76.28%), Postives = 228/253 (90.12%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLTA 759
            MS+VV+LE+IH+IYDSGEV VHAVRGVTL +  GEF+AVMGASGSGKST+MN LGCLDRPT GRY L G D++ LDRN+LADLRN+KLGFVFQGFNLL+RTTALENVELPMLYGRR  + +++++RA H L+IVGL+ RADHFPSQLSGGQQQRVAIARAL N PQ+LLADEPTGNLDSKT++E+MGVFQKLN +GITIVMVTHELDIAHYC+RNLIMRDG++VSD+ V +RLIA  E++++ +AE AAKLTA
Sbjct:    1 MSAVVKLEDIHRIYDSGEVKVHAVRGVTLELHKGEFMAVMGASGSGKSTLMNTLGCLDRPTSGRYLLDGVDIAGLDRNELADLRNEKLGFVFQGFNLLARTTALENVELPMLYGRRRISHRDMQERAEHCLEIVGLADRADHFPSQLSGGQQQRVAIARALANNPQVLLADEPTGNLDSKTAIEVMGVFQKLNAEGITIVMVTHELDIAHYCRRNLIMRDGKVVSDIAVTDRLIADEELRKLREAETAAKLTA 253          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: B1ZXC6_OPITP (ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) TaxID=452637 RepID=B1ZXC6_OPITP)

HSP 1 Score: 392 bits (1007), Expect = 3.930e-136
Identity = 192/252 (76.19%), Postives = 226/252 (89.68%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLT 756
            M +VVQL++IH++Y+SGEV VHAVRGV+L +  GEF+A+MGASGSGKST+MN LGCLDRP+ G Y L G DVS LDRN+LADLRN+KLGF+FQGFNLL+RTTALENVELPMLYGRRH +S+E+R+RA+ +L +VGL+ RADHFPSQLSGGQQQRVAIARAL+NEPQ+LLADEPTGNLDSKTSVE+MGVFQKLND GITIVMVTHELDIA YC+RN+IMRDGR+VSDV V  RL+A  EM+++  AEA AKLT
Sbjct:    1 MPTVVQLQDIHRVYNSGEVQVHAVRGVSLELHRGEFLAIMGASGSGKSTLMNTLGCLDRPSSGTYRLDGVDVSQLDRNELADLRNEKLGFIFQGFNLLARTTALENVELPMLYGRRHHSSRELRERAMSALSVVGLADRADHFPSQLSGGQQQRVAIARALVNEPQVLLADEPTGNLDSKTSVEVMGVFQKLNDDGITIVMVTHELDIAQYCRRNVIMRDGRIVSDVPVAKRLLAAAEMQKLHAAEAEAKLT 252          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A8F9TTP3_9BACT (ABC transporter ATP-binding protein n=1 Tax=Oleiharenicola sp. KSB-15 TaxID=2862869 RepID=A0A8F9TTP3_9BACT)

HSP 1 Score: 389 bits (1000), Expect = 4.910e-135
Identity = 197/252 (78.17%), Postives = 221/252 (87.70%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLT 756
            M +VVQLEEIHK YDSGEV V AV+GV+L I AGEFVA+MGASGSGKST+MNLLGCLDRPT GRY L G DVS L RN+ AD+RNQKLGFVFQGFNLLSRTTALENVELP+LYG R  T + +RDRAL  LDIVGL+ RA HFP+QLSGGQQQRVAIARAL+N+PQILLADEPTGNLDSKTSVE+MGVFQKLND+GITIVMVTHELDIA YC+RNL+MRDGR+VSD  V  RL+A  EM+++ +AE AAKLT
Sbjct:    1 MPAVVQLEEIHKTYDSGEVQVRAVQGVSLAIAAGEFVAMMGASGSGKSTLMNLLGCLDRPTSGRYLLDGVDVSDLGRNERADIRNQKLGFVFQGFNLLSRTTALENVELPLLYGPRRVTGRALRDRALKCLDIVGLANRAGHFPNQLSGGQQQRVAIARALVNQPQILLADEPTGNLDSKTSVEVMGVFQKLNDEGITIVMVTHELDIAQYCRRNLVMRDGRIVSDAPVAARLLAEDEMRKLREAETAAKLT 252          
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Match: A0A2T6DQR5_9BACT (Macrolide ABC transporter ATP-binding protein n=1 Tax=Opitutaceae bacterium EW11 TaxID=2161865 RepID=A0A2T6DQR5_9BACT)

HSP 1 Score: 388 bits (997), Expect = 1.410e-134
Identity = 195/252 (77.38%), Postives = 222/252 (88.10%), Query Frame = 1
Query:    1 MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTMMNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSRTTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGGQQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIVMVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAKLT 756
            M+ VV++E +HKIYDSGEVPVHAVRGV+L I  GEFVA+MGASGSGKST+MNLLGCLDRPT+GRY L G DVS LDRN+LAD+RNQKLGFVFQGFNLL+RTTALENVELPM+YG    T++EVR RA   L+ VGL  RA+HFP+QLSGGQQQRVAIARAL+N+PQILLADEPTGNLDSKTSVE+MGVFQKLNDQGITIVMVTHELDIAH+CKRNLI+RDG +V D  V++RL A  EMK++  AEA AKLT
Sbjct:    1 MAPVVKIEALHKIYDSGEVPVHAVRGVSLEIQRGEFVALMGASGSGKSTLMNLLGCLDRPTRGRYLLDGIDVSGLDRNELADIRNQKLGFVFQGFNLLARTTALENVELPMMYGVHKLTNREVRQRATQCLETVGLGNRAEHFPNQLSGGQQQRVAIARALVNQPQILLADEPTGNLDSKTSVEVMGVFQKLNDQGITIVMVTHELDIAHFCKRNLILRDGVIVRDEIVKDRLSADVEMKKLQSAEAEAKLT 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18557.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D8AXE5_9BACT3.070e-15689.72Macrolide export ATP-binding/permease protein MacB... [more]
A0A4Q1CA00_9BACT3.130e-14985.38ABC transporter ATP-binding protein n=1 Tax=Oleiha... [more]
A0A8J7VC71_9BACT4.450e-14985.77ABC transporter ATP-binding protein n=1 Tax=Candid... [more]
A0A2A2RWE7_9BACT2.570e-14884.98Macrolide ABC transporter ATP-binding protein n=1 ... [more]
A0A1H1TZT1_9BACT2.800e-14178.57Putative ABC transport system ATP-binding protein ... [more]
A0A2A2Q715_9BACT5.730e-13778.74Macrolide ABC transporter ATP-binding protein n=1 ... [more]
A0A3E1EFX2_9BACT9.670e-13776.28Putative ABC transport system ATP-binding protein ... [more]
B1ZXC6_OPITP3.930e-13676.19ABC transporter related n=1 Tax=Opitutus terrae (s... [more]
A0A8F9TTP3_9BACT4.910e-13578.17ABC transporter ATP-binding protein n=1 Tax=Oleiha... [more]
A0A2T6DQR5_9BACT1.410e-13477.38Macrolide ABC transporter ATP-binding protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18557contigP-wetherbeei_contig18557:232..993 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog452637.Oter_3644
PFAMsABC_tran
Model size762
Max annot lvl414999|Opitutae
KEGG koko:K02003
KEGG TC3.A.1
KEGG ModuleM00258
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.45e-137
EggNOG OGsCOG1136@1|root,COG1136@2|Bacteria,46SKR@74201|Verrucomicrobia,3K7HB@414999|Opitutae
DescriptionABC transporter
Cds size762
COG categoryV
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186149.3192773-CDS-P-wetherbeei_contig18557:231..9931683186149.3192773-CDS-P-wetherbeei_contig18557:231..993Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18557 232..993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18557.1.1prot_P-wetherbeei_contig18557.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18557 232..993 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18557.1.1

>prot_P-wetherbeei_contig18557.1.1 ID=prot_P-wetherbeei_contig18557.1.1|Name=mRNA_P-wetherbeei_contig18557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MSSVVQLEEIHKIYDSGEVPVHAVRGVTLTIGAGEFVAVMGASGSGKSTM
MNLLGCLDRPTKGRYTLGGTDVSALDRNQLADLRNQKLGFVFQGFNLLSR
TTALENVELPMLYGRRHFTSKEVRDRALHSLDIVGLSQRADHFPSQLSGG
QQQRVAIARALINEPQILLADEPTGNLDSKTSVEIMGVFQKLNDQGITIV
MVTHELDIAHYCKRNLIMRDGRLVSDVQVENRLIATTEMKRILDAEAAAK
LTA*
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mRNA from alignment at P-wetherbeei_contig18557:232..993+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18557.1.1 ID=mRNA_P-wetherbeei_contig18557.1.1|Name=mRNA_P-wetherbeei_contig18557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18557:232..993+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTCCGTCGTCCAGCTGGAGGAGATCCACAAGATCTACGATTCGGG CGAGGTGCCCGTGCACGCCGTGCGCGGCGTCACGCTCACCATCGGCGCCG GCGAGTTTGTCGCCGTCATGGGCGCCAGCGGCTCGGGCAAGTCCACCATG ATGAACCTGCTCGGCTGCCTCGACCGGCCGACCAAGGGCCGCTATACGCT CGGCGGCACCGACGTCTCCGCCCTCGACCGCAACCAGCTGGCCGACCTGC GCAACCAGAAGCTCGGCTTCGTCTTCCAGGGCTTCAACCTCCTCTCCCGC ACCACCGCCCTCGAGAACGTCGAGCTGCCCATGCTCTACGGCCGCCGCCA CTTCACCTCGAAGGAGGTCCGCGACCGCGCCCTGCACAGCCTCGACATCG TCGGCCTGTCCCAGCGCGCCGACCATTTTCCCAGCCAGCTCTCCGGCGGC CAGCAGCAGCGCGTCGCCATCGCCCGCGCCCTCATCAACGAGCCGCAGAT CCTCCTCGCCGACGAACCCACCGGCAACCTCGACTCCAAGACCTCCGTCG AGATCATGGGCGTCTTCCAGAAACTCAACGACCAGGGCATCACCATCGTG ATGGTCACCCACGAGCTCGACATCGCCCACTACTGCAAGCGCAACCTCAT CATGCGGGACGGCCGCCTCGTCAGCGACGTGCAGGTCGAAAACCGCCTCA TCGCCACCACGGAGATGAAGCGGATCCTGGACGCCGAGGCCGCGGCCAAG CTCACCGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18557:232..993+

>mRNA_P-wetherbeei_contig18557.1.1 ID=mRNA_P-wetherbeei_contig18557.1.1|Name=mRNA_P-wetherbeei_contig18557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18557:232..993+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTCCGTCGTCCAGCTGGAGGAGATCCACAAGATCTACGATTCGGG
CGAGGTGCCCGTGCACGCCGTGCGCGGCGTCACGCTCACCATCGGCGCCG
GCGAGTTTGTCGCCGTCATGGGCGCCAGCGGCTCGGGCAAGTCCACCATG
ATGAACCTGCTCGGCTGCCTCGACCGGCCGACCAAGGGCCGCTATACGCT
CGGCGGCACCGACGTCTCCGCCCTCGACCGCAACCAGCTGGCCGACCTGC
GCAACCAGAAGCTCGGCTTCGTCTTCCAGGGCTTCAACCTCCTCTCCCGC
ACCACCGCCCTCGAGAACGTCGAGCTGCCCATGCTCTACGGCCGCCGCCA
CTTCACCTCGAAGGAGGTCCGCGACCGCGCCCTGCACAGCCTCGACATCG
TCGGCCTGTCCCAGCGCGCCGACCATTTTCCCAGCCAGCTCTCCGGCGGC
CAGCAGCAGCGCGTCGCCATCGCCCGCGCCCTCATCAACGAGCCGCAGAT
CCTCCTCGCCGACGAACCCACCGGCAACCTCGACTCCAAGACCTCCGTCG
AGATCATGGGCGTCTTCCAGAAACTCAACGACCAGGGCATCACCATCGTG
ATGGTCACCCACGAGCTCGACATCGCCCACTACTGCAAGCGCAACCTCAT
CATGCGGGACGGCCGCCTCGTCAGCGACGTGCAGGTCGAAAACCGCCTCA
TCGCCACCACGGAGATGAAGCGGATCCTGGACGCCGAGGCCGCGGCCAAG
CTCACCGCCTGA
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