mRNA_P-wetherbeei_contig1855.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1855.3.1
Unique NamemRNA_P-wetherbeei_contig1855.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.140e-89
Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 1
Query:    1 LTMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADW 651
            L+MEV+P  LRL+AAELGSRL+GTN++FVGMMGTGKS V R LADV+GRY F+DTD +IE+LLG  V +VFA+DGEE FRSVE+QVLDQVHS+VK+ +ATGGG+V   +NW K+ TG+VVWLD+   D+  RLSKDPE+V +RPLL+G DP+  LE LLE+R+  Y  ADV V +   + V D+   VV  + +++DSNPP+ Q WKE+A  AG +W
Sbjct:    7 LSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.420e-89
Identity = 131/218 (60.09%), Postives = 170/218 (77.98%), Query Frame = 1
Query:    1 LTMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
            L+MEV+P  LRL+AAELGSRL+GTN++FVGMMGTGKS V R LADV+GRY F+DTD +IE+LLG  V +VFA+DGEEAFRSVE+QVLDQVHS+VK+ +ATGGG+V   +NW K+ TG+VVWLD+   D+  RLSKDPE+V +RPLL+G DP+  LE LLE+R+  Y  ADV V +   + V D+   VV  + +++DSNPP+ Q WKE+A  AG +W+
Sbjct:   77 LSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEWV 294          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA)

HSP 1 Score: 250 bits (638), Expect = 7.030e-81
Identity = 121/219 (55.25%), Postives = 164/219 (74.89%), Query Frame = 1
Query:   16 DPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYE------AADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
            D   +RL+ AELGS+L+GTN+YFVGMMGTGK++V RNLAD +GRY F+DTD +IEQL+  PV +VF E GEE FR +EA+VL+++HS+VKLV+ATGGG+V  ++NW KL TGLVVWLD+ +DD+V RLS + E+V +R LL G D  A L+A+ ++R+ MYE      +ADVRV +S  + V  VVL  V  L  ++DSNPP+ Q WK+ AK +G +W+
Sbjct:   14 DEAYIRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINWV 232          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.310e-59
Identity = 102/216 (47.22%), Postives = 141/216 (65.28%), Query Frame = 1
Query:    7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
            M++DP  L      LG RL+G+N+YFVGMMG+GKSAVG  +A  +G Y F+DTDE+IE+     + ++F  +GEE FR  EAQVLD VH++V+ VI+TGGG+V R  NWSKL TG+V+WLDV  + ++ R+  D      RPLL   DP   L+ LLE+RR  Y  ADVR+ ++   D   V   VV+ LH+++D NPP  +  K +A+  G DW+
Sbjct:   90 MKIDPARL------LGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRIEGDTN----RPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDWV 295          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.890e-58
Identity = 97/217 (44.70%), Postives = 145/217 (66.82%), Query Frame = 1
Query:    7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISARE-DVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
            M +DP  L      LG RL+G+N+YFVGMMG+GKSAVG  +A  +G Y F+DTD +IE +    + ++FA++GE+ FR +E+QVLD VH+ V+ V++TGGG+V +  NW+KL +G+V+W+DVP   +  R+ KD +    RPLL   +P   LE LLE+R+  Y  ADVR+ ++     ++DV  KVV+ LH+++D NPP  +  K +A+  G DW+
Sbjct:   88 MTIDPARL------LGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRI-KDKDD---RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDWV 294          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7S2U848_9STRA (Shikimate kinase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U848_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.980e-58
Identity = 100/217 (46.08%), Postives = 138/217 (63.59%), Query Frame = 1
Query:    7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
            ++ DP  L      L  RL+GTNIYF+GMMG+GKSAVG  +A  +G Y F+DTDE+IE+     +  +F  +GEE FRS+EAQVLD VH++V+ VI+TGGG V R  NWSK  TG+V+WLDV  D +++R+     Q   RPLL   +P   LE LLE+R   Y  AD+++ I+   D   V   V++ LH ++D NPP  +  K +A+  G DW+Q
Sbjct:   90 LKADPARL------LAPRLQGTNIYFIGMMGSGKSAVGDVVARRMGSYNFLDTDEIIEKATSMSIPSIFEAEGEEGFRSIEAQVLDSVHAYVRCVISTGGGAVCRLSNWSKFQTGIVIWLDVDPDTLISRM-----QGTDRPLLQTENPLETLETLLEERTSRYSQADIQLKITPEMDANAVAEMVIKELHFFIDENPPAWKQAKAKAQAEGLDWVQ 295          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: B8C8C4_THAPS (Shikimate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8C4_THAPS)

HSP 1 Score: 193 bits (491), Expect = 7.950e-58
Identity = 101/217 (46.54%), Postives = 140/217 (64.52%), Query Frame = 1
Query:    4 TMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
            T++VDP  L      L  RL+G N+YF+GMMG+GKSAVG  LA  +G Y F+DTD ++E+  G  + ++F  +GEEAFR  EAQVLD VH+ V+ V++TGGG+++R QNWSKL TGLVV+L V  + ++ R+         RPLL   DP   L +L+E+RR  YE ADV V +    DV+     VV  LHD++D NPP  +  K +A++ G DW+
Sbjct:   87 TLKVDPARL------LSPRLQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAAGMSIPKIFQTEGEEAFREAEAQVLDSVHAHVRCVVSTGGGMILRNQNWSKLQTGLVVYLKVEPEVIMKRIEGTD-----RPLLQTEDPLETLRSLMEERRERYEQADVVVEVEEGVDVEGAADAVVRALHDFIDDNPPAWKVAKAKAQSDGLDWV 292          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A1Z5KE71_FISSO (Shikimate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE71_FISSO)

HSP 1 Score: 192 bits (489), Expect = 9.430e-58
Identity = 97/217 (44.70%), Postives = 140/217 (64.52%), Query Frame = 1
Query:    7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
            +++DP  L      L  RL G N+YF+GMMG+GK++VG  +A  +G Y F+DTD +IE+     + ++F  +GEE FR VEAQ+LD VH +V+ VI+TGGG+V R +NWSKL TGLV+WLDV  + ++ R+     Q   RPLL   DP   L+ALLE+R+  Y+ AD+RV ++   D   V  +V+  LH ++D NPP  +  K +A+  G DW+Q
Sbjct:   70 LKIDPARL------LSPRLNGANLYFIGMMGSGKTSVGEAVARRMGSYTFLDTDAIIEKATKMTIPEIFEAEGEEGFRQVEAQILDSVHPYVRCVISTGGGIVTRMENWSKLQTGLVIWLDVEPEVIIKRI-----QGTDRPLLQTEDPLKKLKALLEERKPKYKNADIRVKVTEEMDTAAVADQVIYDLHHFIDDNPPAWKLAKAKAQAEGLDWVQ 275          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV)

HSP 1 Score: 193 bits (491), Expect = 1.750e-57
Identity = 97/217 (44.70%), Postives = 140/217 (64.52%), Query Frame = 1
Query:    7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
            M++DP  L      LG RL+G+N+YF+GMMG+GKSAVG  +A  +G Y F+DTD +IE+  G  + ++F  +GEE FR VE Q+LD VH++V+ V++TGGG+V R QNW+KL TGLVVWLDV  + ++ R+  D      RPLL   DP   L+ LL +R   Y  AD+R+ ++   D   V   V++ LH ++D NPP  +  K +A+  G DW++
Sbjct:  115 MKIDPARL------LGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRIEGD----ENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDWVK 321          
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A448ZQW6_9STRA (Shikimate kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQW6_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.100e-56
Identity = 97/215 (45.12%), Postives = 142/215 (66.05%), Query Frame = 1
Query:   13 VDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
            +DP  L      LG RL+G+N+Y VGMMG+GKS+VG  LA  +G Y F+DTDE+IE+     ++++F  +GEE FR VE+QVLD VH++V+ V++TGGG+V + +NW KL TG+VVWLDV  + ++ R+  + +    RPLL   DP   L+ LLE+R   Y  AD+RV I+   D   V  ++V  LH+++D NPP  +  K++A+  G DW+Q
Sbjct:   96 IDPARL------LGPRLQGSNLYLVGMMGSGKSSVGDKLARRMGSYKFLDTDEIIEKATKLTINEIFESEGEEGFRDVESQVLDTVHAYVRCVVSTGGGLVCKPKNWGKLQTGIVVWLDVAPEVILKRVEGNED----RPLLKTKDPLQTLKDLLEERTPKYNQADLRVEITEDMDEDAVASRIVLDLHNFIDDNPPAWKLAKQKAQEEGLDWVQ 300          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH1_ECTSI1.140e-8959.91Shikimate Kinase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JIK7_9PHAE1.420e-8960.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZK89_9STRA7.030e-8155.25Shikimate kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7R9ZGS2_9STRA1.310e-5947.22Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=... [more]
A0A6U3Q8M5_9STRA2.890e-5844.70Shikimate kinase n=1 Tax=Ditylum brightwellii TaxI... [more]
A0A7S2U848_9STRA2.980e-5846.08Shikimate kinase n=1 Tax=Attheya septentrionalis T... [more]
B8C8C4_THAPS7.950e-5846.54Shikimate kinase n=1 Tax=Thalassiosira pseudonana ... [more]
A0A1Z5KE71_FISSO9.430e-5844.70Shikimate kinase n=2 Tax=Fistulifera solaris TaxID... [more]
A0A7S1Z366_TRICV1.750e-5744.70Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1... [more]
A0A448ZQW6_9STRA1.100e-5645.12Shikimate kinase n=1 Tax=Pseudo-nitzschia multistr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1855contigP-wetherbeei_contig1855:1448..2676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTH1
Preferred nameSK
PFAMsSKI
Model size660
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00891
KEGG ReactionR02412
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615
Exons3
Evalue7.02e-90
EggNOG OGsCOG0703@1|root,2QTKR@2759|Eukaryota
EC2.7.1.71
Descriptionshikimate metabolic process
Cds size654
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186149.1487815-CDS-P-wetherbeei_contig1855:1447..18401683186149.1487815-CDS-P-wetherbeei_contig1855:1447..1840Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1855 1448..1840 -
1683186149.1607695-CDS-P-wetherbeei_contig1855:2273..24741683186149.1607695-CDS-P-wetherbeei_contig1855:2273..2474Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1855 2274..2474 -
1683186149.174383-CDS-P-wetherbeei_contig1855:2610..26701683186149.174383-CDS-P-wetherbeei_contig1855:2610..2670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1855 2611..2670 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186149.1836298-UTR-P-wetherbeei_contig1855:2670..26761683186149.1836298-UTR-P-wetherbeei_contig1855:2670..2676Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1855 2671..2676 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1855.3.1prot_P-wetherbeei_contig1855.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1855 1448..2670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1855.3.1

>prot_P-wetherbeei_contig1855.3.1 ID=prot_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp
MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGF
IDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGG
GVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPR
AALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPR
HQAWKEEAKTAGADWLQ*
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mRNA from alignment at P-wetherbeei_contig1855:1448..2676-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1855.3.1 ID=mRNA_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1229bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:1448..2676- (Phaeothamnion wetherbeei SAG_119_79)
TTAACGATGGAGGTGGACCCCAAAAACTTGCGGTTGCGAGCAGCGGAGCT CGGTTCCAGGCTAAAGGTGCGCGATATGGCTTTTGTCGCACCTTCAAGCC AGGGCATACCCGCAACTTCTTTCTCCGGCGGGACTTCGATTGAGAATTGC GATTGAGCACCTCTCTCATAGGCCATCCTTCGTATCCTCTTCGCAACTGC AGGGCACAAACATCTACTTTGTGGGCATGATGGGGACGGGCAAGAGCGCG GTGGGGCGGAATCTCGCCGACGTGATCGGCCGATACGGATTCATCGACAC GGACGAGGTGATCGAGCAGCTGCTGGGCTGCCCTGTCCACCAGGTCTTCG CGGAGGATGGCGAGGAGGCGTTCCGCTCCGTCGAGGCGCAGGTCCTTGAC CAGGTCAGCGGAAGAAGGCAGTGGGATAGGGAGCTTCACCGGGAACGCTC TTGCCATTTAACACAGAAGCTTGCTTTCGTGCGTCTGCTTCTCGCGTCGC GTAGCGGTTATCTTTTGTTCATTGCAAAAGTTTGTTTGTGTTTCCTTTTG CAGTTGCTATATGGCGATGCCCTTGCGGCATCTCCTTGGCTGAGCATTTC TCCGGTATTTGGCGGCAGGTACGCCACATTGAGGAAATCTTCCTATCAGC ATCTCCGTTCTGACTCTTAGGGATTGTTTTGTGTGCCTGCCTTTGAGGAA TGCATGCCGTAGCGATCGATAGAGAATTCACTCAATGCCTCGTGGCGAGG GGCCAACGCAATCACTCGTATTTGATCTTTTTCCCGCGCTCTCGTTGTTA ATCTGGAGCGCCGTGTGGCGTATTGGGAAAAAACAGGTGCACTCGTTCGT CAAGCTGGTCATCGCGACGGGCGGCGGCGTCGTCATGCGGCAACAGAACT GGAGCAAACTGCACACTGGTCTGGTCGTCTGGCTCGACGTGCCCGTCGAC GACGTCGTCGCGCGTCTCTCCAAGGACCCTGAGCAGGTCCGACGGCGGCC ACTGCTGTCCGGTGCAGACCCGCGGGCGGCGCTCGAGGCGCTGCTGGAGC AGCGGCGGCACATGTACGAGGCGGCGGACGTCCGGGTGGTGATTTCTGCG AGAGAGGACGTGCAGGACGTGGTTTTGAAAGTCGTAGAGCACCTGCACGA CTATGTCGACAGCAACCCGCCGCGACATCAGGCTTGGAAGGAGGAGGCCA AGACGGCCGGCGCCGACTGGCTCCAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1855:1448..2676-

>mRNA_P-wetherbeei_contig1855.3.1 ID=mRNA_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:1448..2676- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGTGGACCCCAAAAACTTGCGGTTGCGAGCAGCGGAGCTCGGTTC
CAGGCTAAAGGGCACAAACATCTACTTTGTGGGCATGATGGGGACGGGCA
AGAGCGCGGTGGGGCGGAATCTCGCCGACGTGATCGGCCGATACGGATTC
ATCGACACGGACGAGGTGATCGAGCAGCTGCTGGGCTGCCCTGTCCACCA
GGTCTTCGCGGAGGATGGCGAGGAGGCGTTCCGCTCCGTCGAGGCGCAGG
TCCTTGACCAGGTGCACTCGTTCGTCAAGCTGGTCATCGCGACGGGCGGC
GGCGTCGTCATGCGGCAACAGAACTGGAGCAAACTGCACACTGGTCTGGT
CGTCTGGCTCGACGTGCCCGTCGACGACGTCGTCGCGCGTCTCTCCAAGG
ACCCTGAGCAGGTCCGACGGCGGCCACTGCTGTCCGGTGCAGACCCGCGG
GCGGCGCTCGAGGCGCTGCTGGAGCAGCGGCGGCACATGTACGAGGCGGC
GGACGTCCGGGTGGTGATTTCTGCGAGAGAGGACGTGCAGGACGTGGTTT
TGAAAGTCGTAGAGCACCTGCACGACTATGTCGACAGCAACCCGCCGCGA
CATCAGGCTTGGAAGGAGGAGGCCAAGACGGCCGGCGCCGACTGGCTCCA
ATGA
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