mRNA_P-wetherbeei_contig1852.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1852.4.1
Unique NamemRNA_P-wetherbeei_contig1852.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A835YI98_9STRA (SPG1, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI98_9STRA)

HSP 1 Score: 363 bits (932), Expect = 2.570e-125
Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 1 
Query:    1 MAEAKTGDGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLFTE 609
            M+EAKTG+  R+NVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGG+R EFLSMLPLVCNDAVA FFMFDLSRKSTL SIKEWYRQVRGLNRNAHAFLVGTKYD+F TL  EEQQD+DK ARKFA AMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNL+QIE  GEPLLLFT+
Sbjct:    1 MSEAKTGESGRSNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGQR-EFLSMLPLVCNDAVATFFMFDLSRKSTLNSIKEWYRQVRGLNRNAHAFLVGTKYDIFATLPTEEQQDIDKMARKFAAAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEQIENVGEPLLLFTD 202
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: D7G5G8_ECTSI (SPG1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G8_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 3.790e-125
Identity = 181/206 (87.86%), Postives = 196/206 (95.15%), Query Frame = 1 
Query:    1 MAEAKTGDGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLFTEEDG 618
            MAE K  D SRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGG+R EFLSMLPLVCNDAVAIFFMFDLSRKSTL S+KEWYRQVRGLNR+A+AFLVGTKYD++T++ AEEQ+D+DKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLS+VFDLRCNLD+I   GEPLLLF++E+G
Sbjct:    1 MAETKAHDASRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGQR-EFLSMLPLVCNDAVAIFFMFDLSRKSTLNSVKEWYRQVRGLNRSAYAFLVGTKYDLYTSMPAEEQRDIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSRVFDLRCNLDEISGAGEPLLLFSKEEG 205
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A6V1K250_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K250_HETAK)

HSP 1 Score: 332 bits (852), Expect = 1.070e-113
Identity = 164/192 (85.42%), Postives = 179/192 (93.23%), Query Frame = 1 
Query:   31 RNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLFT 606
            RNNV+VKVGMVGDAQVGKTTLMVKY ENKFDEEYIMTLGVNFMEK ITLRNTE+TFSIWDLGG+R EFLSMLPLVCNDA+AIFF+FDLSRKSTLTSIKEWYRQ RGLNRNAHAFLVGTKYD+FTTL+ EEQ ++DKQARKFAKAM APL+FTS+ HSINVQKMFK+VLS+VF+LRC L  I+  GEPLLLFT
Sbjct:    9 RNNVIVKVGMVGDAQVGKTTLMVKYCENKFDEEYIMTLGVNFMEKIITLRNTEVTFSIWDLGGQR-EFLSMLPLVCNDAMAIFFLFDLSRKSTLTSIKEWYRQARGLNRNAHAFLVGTKYDIFTTLSPEEQAEIDKQARKFAKAMKAPLVFTSSPHSINVQKMFKLVLSRVFELRCTLQPIKNVGEPLLLFT 199
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A7S2UXX0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXX0_9STRA)

HSP 1 Score: 323 bits (829), Expect = 3.770e-110
Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1 
Query:    1 MAEAKTGDGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLL 600
            MAE+K  D SRNNV+VKVGMVGDAQVGKT+LMVKYVENKFDEEYIMTLGVNFMEK+ITLRNTEITFSIWDLGG+R EFLSMLPLVCNDA  I FMFDLSRKSTLTSIKEWYRQVR LNRNAH  LVGTKYD+FTTL  EEQQD+DKQARKFA+AM APLIFTS+ HSIN+QKMFK++L++VFDLR  +  IE  GEPL L
Sbjct:    1 MAESKD-DNSRNNVIVKVGMVGDAQVGKTSLMVKYVENKFDEEYIMTLGVNFMEKSITLRNTEITFSIWDLGGQR-EFLSMLPLVCNDANTIMFMFDLSRKSTLTSIKEWYRQVRALNRNAHTLLVGTKYDIFTTLPPEEQQDIDKQARKFARAMKAPLIFTSSQHSINIQKMFKLILARVFDLRLTIPAIEGIGEPLFL 198
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A7S2CL26_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CL26_9STRA)

HSP 1 Score: 316 bits (809), Expect = 9.280e-107
Identity = 155/191 (81.15%), Postives = 174/191 (91.10%), Query Frame = 1 
Query:   31 RNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            R+NVV+K GMVGD QVGKTTLMVKYVEN+ DE+YI TLGVNFMEK+I LRNTE+TFSIWDLGG+R EFLSMLPLVCNDA AIFFMFDLSRKSTLTS+KEWYRQ RGLNR A AFLVGTKYDVFTTL+ E Q+D+ KQARKFAKAM APL+FTSA+HS+NVQK+FKVVL+KVFDL+C LD+IE  GEPLL+F
Sbjct:   36 RDNVVIKCGMVGDMQVGKTTLMVKYVENRLDEDYIQTLGVNFMEKSIMLRNTEVTFSIWDLGGQR-EFLSMLPLVCNDASAIFFMFDLSRKSTLTSVKEWYRQARGLNRPAVAFLVGTKYDVFTTLSVEHQEDVTKQARKFAKAMKAPLVFTSATHSVNVQKLFKVVLAKVFDLKCTLDKIEEVGEPLLIF 225
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A5D6XRH4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRH4_9STRA)

HSP 1 Score: 311 bits (797), Expect = 5.230e-105
Identity = 154/196 (78.57%), Postives = 173/196 (88.27%), Query Frame = 1 
Query:   16 TGDGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            +G G+RNNVVVKVGMVGDAQVGKT+LMVKYVE KFDE+YI TLGVNFMEKTI LRNTEITFSIWDLGG  REF+SMLPLVCNDAVAI FMFDLSRK+TLTS+KEWYRQVR +N+NA  FL+G KYD FT  + EEQ+D+ KQARKFAKAM APLIFTSASHSINVQK+FKVVLSKVFDL+C +  IE  G+P+L +
Sbjct:   26 SGSGARNNVVVKVGMVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGG-HREFISMLPLVCNDAVAILFMFDLSRKATLTSVKEWYRQVRSINKNAFPFLIGMKYDHFTNFSPEEQEDITKQARKFAKAMKAPLIFTSASHSINVQKLFKVVLSKVFDLKCTVPMIERVGDPILQY 220
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: K3W6N8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6N8_GLOUD)

HSP 1 Score: 310 bits (793), Expect = 2.050e-104
Identity = 154/193 (79.79%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:   25 GSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            G RNNVVVKVGMVGDAQVGKT+LMVKYVE KFDE+YI TLGVNFMEKTI LRNTEITFSIWDLGG  REF+SMLPLVCNDAVAI FMFDLSRK+TLTS+KEWYRQVR +N+NA  FL+G KYD FT L+ EEQ+D+ KQARKFAKAM APLIFTSASHSINVQK+FKVVLSKVFDL+C +  IE  G+P+L +
Sbjct:   28 GGRNNVVVKVGMVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGG-HREFISMLPLVCNDAVAILFMFDLSRKATLTSVKEWYRQVRSINKNAFPFLIGMKYDHFTNLSMEEQEDITKQARKFAKAMKAPLIFTSASHSINVQKLFKVVLSKVFDLKCTVPMIERIGDPILQY 219
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A6G0X9I9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9I9_9STRA)

HSP 1 Score: 306 bits (784), Expect = 5.140e-103
Identity = 150/193 (77.72%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:   25 GSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            G RNNVVVK+GMVGDAQVGKT+LMVKYVE KFDE+YI TLGVNFMEKTITLRNTEITFSIWDLGG  REF+SMLPLVCNDAVA+ FMFDLSRK+TLTS+KEWY+QVR +N+NA  FLVGTK+D  TT + EEQ D+ KQARKFAKAM APLIFTSASHS+NVQK+FK+VLSKVFDL+C +  I+  GEP+L +
Sbjct:   30 GGRNNVVVKIGMVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTITLRNTEITFSIWDLGG-HREFISMLPLVCNDAVAVLFMFDLSRKATLTSVKEWYKQVRAINKNAFPFLVGTKFDHMTTYSPEEQDDITKQARKFAKAMKAPLIFTSASHSVNVQKVFKIVLSKVFDLKCTIPLIQNVGEPILEY 221
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BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A2D4BF72_PYTIN (Septum-promoting GTP-binding protein 1 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BF72_PYTIN)

HSP 1 Score: 305 bits (781), Expect = 1.160e-102
Identity = 151/194 (77.84%), Postives = 170/194 (87.63%), Query Frame = 1 
Query:   22 DGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            +G+RNNVVVKVGMVGDAQVGKT+LMVKYVE KFDE+YI TLGVNFMEKTI LRNTEITFSIWDLGG  REF+SMLPLVCNDAVAI FMFDLSRK+TL S+KEWYRQVR +N+NA  FL+G KYD F   + EEQ+D+ KQARKFAKAM APLIFTSASHSINVQK+FKVVLSKVFDL+C +  IE  G+P+L +
Sbjct:   22 NGARNNVVVKVGMVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGG-HREFISMLPLVCNDAVAILFMFDLSRKATLLSVKEWYRQVRSINKNAFPFLIGMKYDQFANFSLEEQEDITKQARKFAKAMKAPLIFTSASHSINVQKVFKVVLSKVFDLKCTVPMIEKIGDPILQY 214
[Close]
BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Match: A0A067CAP4_SAPPC (Septum-promoting GTP-binding protein 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAP4_SAPPC)

HSP 1 Score: 305 bits (781), Expect = 1.240e-102
Identity = 150/191 (78.53%), Postives = 170/191 (89.01%), Query Frame = 1 
Query:   31 RNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSRKSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLLF 603
            RNNVVVKVGMVGDAQVGKT+LMVKYVE KFDE+YI TLGVNFMEKTITLRNTEITFSIWDLGG  REF+SMLPLVCNDAVA+ FMFDLSRK+TLTS+KEWYRQVR +N+NA  FLVGTKYD  T+ + EEQ D+ KQARKFAKAM APLIFTSASHS+NVQK+FK+VLSKVFDL+C +  I+  G+P+L +
Sbjct:   27 RNNVVVKVGMVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTITLRNTEITFSIWDLGG-HREFISMLPLVCNDAVAVLFMFDLSRKATLTSVKEWYRQVRAINKNAFPFLVGTKYDHMTSFSPEEQDDITKQARKFAKAMKAPLIFTSASHSVNVQKVFKIVLSKVFDLKCTIPLIQNVGDPILEY 216
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1852.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YI98_9STRA2.570e-12590.15SPG1, ras superfamily GTPase n=1 Tax=Tribonema min... [more]
D7G5G8_ECTSI3.790e-12587.86SPG1, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
A0A6V1K250_HETAK1.070e-11385.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UXX0_9STRA3.770e-11082.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CL26_9STRA9.280e-10781.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XRH4_9STRA5.230e-10578.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W6N8_GLOUD2.050e-10479.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6G0X9I9_9STRA5.140e-10377.72Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A2D4BF72_PYTIN1.160e-10277.84Septum-promoting GTP-binding protein 1 n=2 Tax=Pyt... [more]
A0A067CAP4_SAPPC1.240e-10278.53Septum-promoting GTP-binding protein 1 n=2 Tax=Sap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1852contigP-wetherbeei_contig1852:3139..4851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5G8
Preferred namespg1
PFAMsRas
Model size703
Max annot lvl2759|Eukaryota
KEGG koko:K06682,ko:K07976
KEGG Pathwayko04111,map04111
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000166,GO:0000226,GO:0000278,GO:0000280,GO:0000910,GO:0001100,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005815,GO:0005816,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007093,GO:0007096,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010458,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0010973,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0023052,GO:0030071,GO:0031028,GO:0031577,GO:0031578,GO:0031991,GO:0032465,GO:0032467,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0040001,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0044732,GO:0044770,GO:0044772,GO:0045786,GO:0045787,GO:0045839,GO:0045841,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051293,GO:0051301,GO:0051302,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060341,GO:0065007,GO:0070727,GO:0071174,GO:0071840,GO:0090068,GO:0097159,GO:0097367,GO:0110020,GO:0140014,GO:1901265,GO:1901363,GO:1901891,GO:1901893,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902363,GO:1902412,GO:1902542,GO:1902850,GO:1903047,GO:1903436,GO:1903438,GO:1903490,GO:1903827,GO:1905818,GO:1905819,GO:2000816,GO:2001251
Exons6
Evalue1.23e-126
EggNOG OGsCOG1100@1|root,KOG1673@2759|Eukaryota
Ec32 ortholog descriptionSPG1, Ras superfamily GTPase
Ec32 orthologEc-22_000550.1
Descriptionseptation initiation signaling
Cds size633
COG categoryS
BRITEko00000,ko00001,ko04031
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1852.4.1prot_P-wetherbeei_contig1852.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1852 3209..4851 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186148.3175905-UTR-P-wetherbeei_contig1852:3138..32081683186148.3175905-UTR-P-wetherbeei_contig1852:3138..3208Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1852 3139..3208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186148.331674-CDS-P-wetherbeei_contig1852:3208..33251683186148.331674-CDS-P-wetherbeei_contig1852:3208..3325Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 3209..3325 -
1683186148.3459036-CDS-P-wetherbeei_contig1852:3643..37181683186148.3459036-CDS-P-wetherbeei_contig1852:3643..3718Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 3644..3718 -
1683186148.355519-CDS-P-wetherbeei_contig1852:3986..40881683186148.355519-CDS-P-wetherbeei_contig1852:3986..4088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 3987..4088 -
1683186148.3647738-CDS-P-wetherbeei_contig1852:4308..44221683186148.3647738-CDS-P-wetherbeei_contig1852:4308..4422Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 4309..4422 -
1683186148.3735166-CDS-P-wetherbeei_contig1852:4538..47121683186148.3735166-CDS-P-wetherbeei_contig1852:4538..4712Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 4539..4712 -
1683186148.3833497-CDS-P-wetherbeei_contig1852:4800..48511683186148.3833497-CDS-P-wetherbeei_contig1852:4800..4851Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1852 4801..4851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1852.4.1

>prot_P-wetherbeei_contig1852.4.1 ID=prot_P-wetherbeei_contig1852.4.1|Name=mRNA_P-wetherbeei_contig1852.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
MAEAKTGDGSRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGV
NFMEKTITLRNTEITFSIWDLGGKRREFLSMLPLVCNDAVAIFFMFDLSR
KSTLTSIKEWYRQVRGLNRNAHAFLVGTKYDVFTTLTAEEQQDMDKQARK
FAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLDQIEVPGEPLLL
FTEEDGPPKT*
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mRNA from alignment at P-wetherbeei_contig1852:3139..4851-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1852.4.1 ID=mRNA_P-wetherbeei_contig1852.4.1|Name=mRNA_P-wetherbeei_contig1852.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1713bp|location=Sequence derived from alignment at P-wetherbeei_contig1852:3139..4851- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGAAGCAAAGACGGGCGATGGTAGCCGAAACAATGTCGTCGTCAA
GGTAGGCGCCGTTTGCCTGCAACCCGCCATCGCTGGGTCGCCGGTTTGCG
ATCCTTACGCGGAGTAAACTTGCACCCTCCTTGTTACAGGTTGGCATGGT
AGGCGATGCCCAAGTGGGCAAGACCACGTTGATGGTGAAATATGTGGAGA
ACAAATTTGATGAGGAGTATATCATGACGCTGGGCGTCAACTTCATGGAA
AAGACCATCACCCTGCGAAACACAGAAATCACCTTCAGCATCTGGGACCT
CGGGGGTAAGCGAGTCTGGCCGTTGCAGGAGCAGCATCGAAATGCGTTGC
TAGTATATTTGCTGAAACGTCTTTCCTTTTCCCTTAGAGTTCCTAACAAT
CTTCCATCTTTGCTCCTACTCCAGGCCAGCGAGAGTTCCTGTCGATGCTC
CCGCTCGTCTGCAACGATGCGGTCGCCATCTTCTTCATGTTCGACCTCTC
ACGAAAATCGACGCTGACGTCCATCAAGGAGTGGTACCGACAGGTGCGCC
AAAGCCGAATGCCTGATGTCTTTCTCTGTCATCTCCAGCGGAGCTGCCAC
CGCCTGCCCTCTGGTGCGAACAGCGCGAGCCGTCCTCGCCGGCGCACGGT
CATGTCGTCACTTCAAGTCGTCGCCTCTTATTCTTACCTCCTATCAACTT
GGCATCTTTTCCCTCTGACGTGGTGTCATGCGTGTATGTCACCGGACCCG
CGTGGCACACCAGGTGCGGGGGCTGAACCGCAACGCCCATGCCTTCCTGG
TGGGCACGAAGTACGACGTCTTCACCACGCTGACCGCCGAGGAGCAGCAG
GACATGGACAAGCAGGTGCGAGCAGTTGGGGCCATTCTAAACAAAGTTGT
ACTTCTGGAGTGCCGGATGGCTGGCAAAGATAGGTGCAGCTGCGACGGTC
GCAGCACTCGCAACGCGTGTAGGAGACTAAGCACGTTGTGCTTGTGTGCT
GAGGCTTCCTAGCTGTGAAATTTTGCCATCTTTGGTTCTAACCTGCCAGC
TGATGCGATTCCTCTTCCTTTCTGCTCGTCGCCTCTGCTGCTGATGTCTC
TTCACCGGCTGAACCGAATCAAACCGATGCCAGGCGCGCAAGTTCGCCAA
GGCGATGCACGCACCGCTCATCTTCACCAGCGCATCCCACTCTATCAACG
TCCAAAAGGTGCGGCCAAAAACATGGCACCTATTTCTTCTTCTCTTCAAT
CGATAACCATCCGGCTGGCGCCTGCGTAATGCCCTGGCCGTAGAATACTC
TTCATGCAGTGGCTGCCCGCAGATCCTTCAGTATCTGTGCAACTTATGGA
GTCGTTGCGAGTAACTTGAGTACAGTAAGACGCCGGCTGTTACATGTACA
TTCTGACCGTCGCATGCATCGGTACCCTCTTCCCACGGCCCGGGTCGGCG
GCGGGGGCGGTGACAATGGCGGCAATGGCTGCGACGACGGCAACAACAAC
GGCGGCGAGTCTCTCTCTGCCTGCAGATGTTCAAGGTGGTGCTGTCGAAG
GTGTTCGACCTGCGATGCAACCTGGACCAGATCGAGGTCCCCGGAGAGCC
GCTCTTGCTCTTTACAGAGGAGGATGGGCCGCCCAAGACATAGCCTGGTC
GGTGCCTCGAAAGGGCGTCGCCCTCGACGAGCATATCTTTAGTATACACA
ATTAAGTAACCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1852:3139..4851-

>mRNA_P-wetherbeei_contig1852.4.1 ID=mRNA_P-wetherbeei_contig1852.4.1|Name=mRNA_P-wetherbeei_contig1852.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig1852:3139..4851- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGAAGCAAAGACGGGCGATGGTAGCCGAAACAATGTCGTCGTCAA
GGTTGGCATGGTAGGCGATGCCCAAGTGGGCAAGACCACGTTGATGGTGA
AATATGTGGAGAACAAATTTGATGAGGAGTATATCATGACGCTGGGCGTC
AACTTCATGGAAAAGACCATCACCCTGCGAAACACAGAAATCACCTTCAG
CATCTGGGACCTCGGGGGTAAGCGACGAGAGTTCCTGTCGATGCTCCCGC
TCGTCTGCAACGATGCGGTCGCCATCTTCTTCATGTTCGACCTCTCACGA
AAATCGACGCTGACGTCCATCAAGGAGTGGTACCGACAGGTGCGGGGGCT
GAACCGCAACGCCCATGCCTTCCTGGTGGGCACGAAGTACGACGTCTTCA
CCACGCTGACCGCCGAGGAGCAGCAGGACATGGACAAGCAGGCGCGCAAG
TTCGCCAAGGCGATGCACGCACCGCTCATCTTCACCAGCGCATCCCACTC
TATCAACGTCCAAAAGATGTTCAAGGTGGTGCTGTCGAAGGTGTTCGACC
TGCGATGCAACCTGGACCAGATCGAGGTCCCCGGAGAGCCGCTCTTGCTC
TTTACAGAGGAGGATGGGCCGCCCAAGACATAG
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