mRNA_P-wetherbeei_contig18478.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 4.770e-13 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 37 LAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAI 192
L ++L+ +GLGKY FAE+EVDL+AL LM E DLAD+ IPKGPRLKILNA+
Sbjct: 572 LGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAV 623
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.670e-11 Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 34 ALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIR 195
+LAELL L L KY R E+EVDLDAL LM E D DL IPKGPRLKI+NA R
Sbjct: 394 SLAELLCALKLTKYARPLEENEVDLDALQLMSEADFTDLGIPKGPRLKIMNAAR 447
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: A0A1X7U136_AMPQE (SAM domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U136_AMPQE) HSP 1 Score: 62.0 bits (149), Expect = 2.260e-9 Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 37 LAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIRRQ 201
L+ LL++LGL KY +F ++E+D AL LM E D A++ IPKGPR+K+LNAI R+
Sbjct: 2689 LSGLLDKLGLSKYHNLFQKNEIDHHALLLMSEKDFAEVGIPKGPRVKLLNAIGRK 2743
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 2.980e-9 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 37 LAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIR 195
LAE L ++GLG+Y + E+E+DL+A+ LM + D D+ IPKGPR+K+L A+R
Sbjct: 443 LAEFLGDMGLGQYAQALTENEIDLEAVQLMADSDFQDIGIPKGPRVKLLYALR 495
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 3.020e-9 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 37 LAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIR 195
LAE L ++GLG+Y + E+E+DL+A+ LM + D D+ IPKGPR+K+L A+R
Sbjct: 583 LAEFLGDMGLGQYAQALTENEIDLEAVQLMADSDFQDIGIPKGPRVKLLYALR 635
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: A0A7S2PSC4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PSC4_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.450e-8 Identity = 34/55 (61.82%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 25 MDEALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNA 189
MDE A L+ L L KY I E+EVDL L LM+E DLA+L IPKGPRLKIL A
Sbjct: 1072 MDELTA-FLQTLNLSKYAPILQENEVDLAVLPLMKEVDLAELGIPKGPRLKILRA 1125
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: UPI00077A5B7E (ankyrin repeat and KH domain-containing protein mask-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A5B7E) HSP 1 Score: 59.3 bits (142), Expect = 1.980e-8 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 31 EALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIR 195
+ L LE L L + +F E+E+DLDAL LM E D AD+ +PKGPR+K+LN+ R
Sbjct: 1048 DTLQTFLERLSLSSHLGLFQENEIDLDALLLMSEKDYADIGLPKGPRVKLLNSTR 1102
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: UPI001CF56318 (ankyrin repeat domain-containing protein 17-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF56318) HSP 1 Score: 59.3 bits (142), Expect = 2.010e-8 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 31 EALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAIR 195
+ L LE L L + +F E+E+DLDAL LM E D AD+ +PKGPR+K+LN+ R
Sbjct: 1968 DTLQTFLERLSLSSHLGLFQENEIDLDALLLMSEKDYADIGLPKGPRVKLLNSTR 2022
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: UPI00053C1989 (uncharacterized protein LOC104824671 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1989) HSP 1 Score: 58.9 bits (141), Expect = 2.490e-8 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 31 EALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAI 192
+ + +LL LGLGKY +F EVD+ AL M+E DL DL+IP GPR KIL A+
Sbjct: 301 QTVDDLLNSLGLGKYAVLFKAEEVDMTALKQMKESDLKDLTIPMGPRKKILQAL 354
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ) HSP 1 Score: 57.4 bits (137), Expect = 2.970e-8 Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 49 LEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLKILNAI 192
L+ LGL KY +FAE+E+DLDA+ L+ E D +L +P GPR K+L A+
Sbjct: 9 LDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAV 56 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18478.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18478.1.1 >prot_P-wetherbeei_contig18478.1.1 ID=prot_P-wetherbeei_contig18478.1.1|Name=mRNA_P-wetherbeei_contig18478.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp MDEALAELLEELGLGKYGRIFAESEVDLDALALMEEGDLADLSIPKGPRLback to top mRNA from alignment at P-wetherbeei_contig18478:820..1059- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18478.1.1 ID=mRNA_P-wetherbeei_contig18478.1.1|Name=mRNA_P-wetherbeei_contig18478.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig18478:820..1059- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18478:820..1059- >mRNA_P-wetherbeei_contig18478.1.1 ID=mRNA_P-wetherbeei_contig18478.1.1|Name=mRNA_P-wetherbeei_contig18478.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig18478:820..1059- (Phaeothamnion wetherbeei SAG_119_79)back to top |