mRNA_P-wetherbeei_contig1845.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1845.1.1
Unique NamemRNA_P-wetherbeei_contig1845.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A0S8B982_9PROT (Molybdopterin dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B982_9PROT)

HSP 1 Score: 302 bits (774), Expect = 6.880e-100
Identity = 173/281 (61.57%), Postives = 207/281 (73.67%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDLAAE-----LAGDLSPLADLENKAETKLHLANVLARRALA 825
            +K  AFAYA+PR L+EAFALL++HG +A+++AGGQSL+A LN+RLAAP IL+DI A+PGL G++V G  LVIGA T HR IE+S  VAKH PLL QAAPHIAHVAIRN+GTLGGS+A+ADPAAEWPACC+AL AT  + S KGERRVAA +FF  LY TALG  EL+ A+EIP + +  R  FLEL RR+GDYAIVG+AA A+  G  LS V+L YLG G  P  A+ AM A EGK  A D A       +A DL P AD+   AE K HLA VL  RA+A
Sbjct:    1 MKPSAFAYARPRALEEAFALLDKHGENAKLLAGGQSLLASLNMRLAAPEILVDIGAIPGLDGIAVRGQTLVIGARTTHRAIERSEAVAKHAPLLAQAAPHIAHVAIRNAGTLGGSLAMADPAAEWPACCVALQATIVVTSKKGERRVAATDFFKDLYTTALGAGELITAVEIPCVEKGERHAFLELVRRRGDYAIVGLAARARLKGKTLSGVQLVYLGVGVTPVQAKGAMAALEGKT-ADDAAIRAAQDAIARDLEPNADIYTSAEAKRHLARVLVARAVA 280          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A1F4EM12_9PROT (Molybdopterin dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EM12_9PROT)

HSP 1 Score: 299 bits (765), Expect = 1.600e-98
Identity = 173/280 (61.79%), Postives = 207/280 (73.93%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLP-EHRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKP--PATDLAAE--LAGDLSPLADLENKAETKLHLANVLARRALA 825
            +KAP+F YA+P +L EA  LL RHG  A+++AGGQSL+  LNLRL++P++LID+  L  L G+++ G  L IGALTRHR IE+S  VA H PLL QAAPHIAHVAIRN GT GGS+A++DPAAEWPACCLAL A+  + SA+GERRV A  FF  LYAT L P E++ A EIP    + RSVFLEL+RR+GDYAIVGVAA A+ + GRL DVRLA+LG   VP LARRAM A EG P   A   AAE  L  +L P+ADL + A TKLHLA VLA RALA
Sbjct:    1 MKAPSFGYARPESLAEALELLARHGERAKLLAGGQSLIPSLNLRLSSPALLIDLGNLSELEGIALQGKDLRIGALTRHRAIERSPVVAAHAPLLAQAAPHIAHVAIRNRGTFGGSLAMSDPAAEWPACCLALGASIVVASARGERRVQAERFFKALYATDLAPDEILVAAEIPAAAADSRSVFLELARRRGDYAIVGVAAQARRSKGRLQDVRLAFLGVAAVPLLARRAMAALEGGPCDAAAIAAAERALGDELEPMADLYHSAATKLHLARVLAGRALA 280          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A1F4C4M6_9PROT (Molybdopterin dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C4M6_9PROT)

HSP 1 Score: 295 bits (756), Expect = 3.700e-97
Identity = 172/279 (61.65%), Postives = 205/279 (73.48%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPP-ATDLAAE---LAGDLSPLADLENKAETKLHLANVLARRAL 822
            +KAP F+Y KP +L E F LL+RHG  AR++AGGQSL+A LNLRL+ P +L+DIT +PGL+G++VSG  + IGALT HR+IE SA++A+H PLL QA  ++AH AIRN GT GGSIALADPAAE+PAC +ALDATF L    GERRV AREFF GLY TAL P ELV A E PL    ++SVFLEL+RR GDYAIVG+AA A   GGR+SD RLA+LG G  P LA RA  A EG+ P A  +AA    LA +L  LADL +   TKLHLA VL  RAL
Sbjct:    1 MKAPEFSYVKPGSLGEVFDLLDRHGDRARVLAGGQSLLASLNLRLSEPELLVDITGVPGLSGIAVSGQTVRIGALTTHRQIETSAQIARHLPLLAQAVRNVAHAAIRNVGTFGGSIALADPAAEYPACAVALDATFVLAGRAGERRVKAREFFRGLYETALNPGELVTAGEFPLAGAGYQSVFLELARRHGDYAIVGLAAHALVAGGRISDARLAFLGAGSTPVLAVRAAAAIEGRQPDAQAIAAAQATLAEELEMLADLYSSRATKLHLARVLLGRAL 279          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A0S8C6G3_9PROT (FAD-binding PCMH-type domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C6G3_9PROT)

HSP 1 Score: 295 bits (755), Expect = 5.430e-97
Identity = 171/280 (61.07%), Postives = 204/280 (72.86%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPEH-RSVFLELSRRKGDYAIVGVAAVA-KSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDLAAE----LAGDLSPLADLENKAETKLHLANVLARRAL 822
            +KAP FAY + R+L E F LLE HG  AR++AGGQSL+A LN+RLAAP +LIDIT +  L+G+ V G K+ IGAL  H EI++SAE+A+H PLL+QAAPHIAHVAIRN GT GGS+A ADPAAEWPACC+ LDA F L S  G RRVAAREFF GLYATAL P E++A +E+     + RS F+ELSRR+GDYA VGVAA+A KS  G LSD+R+A+LG G  P LAR +M A EGK  + D  A     L  DL P ADL   A TKLHLA V+  RAL
Sbjct:    1 MKAPPFAYVRARSLGEVFDLLEHHGESARLLAGGQSLLASLNMRLAAPELLIDITHIAELSGIEVRGRKIRIGALATHAEIQRSAEIARHLPLLSQAAPHIAHVAIRNVGTFGGSLAHADPAAEWPACCVVLDAQFVLRSRAGTRRVAAREFFQGLYATALRPNEILAQVEVAATGTNWRSAFVELSRRRGDYATVGVAALARKSARGVLSDLRVAFLGVGPAPALARASMAALEGKRVSADTIAAAGEALGQDLEPSADLHAAASTKLHLARVITGRAL 280          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A521V6J5_9PROT (Xanthine dehydrogenase family protein subunit M n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V6J5_9PROT)

HSP 1 Score: 286 bits (731), Expect = 2.290e-93
Identity = 169/279 (60.57%), Postives = 199/279 (71.33%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKP-PATDLAAE---LAGDLSPLADLENKAETKLHLANVLARRAL 822
            +KA +F+Y KP  L E F LL RHG  AR++AGGQSL+A LNLRL+AP +LIDIT +PGLAG++VSGG + IGALT HR+IE+S EVA+H PLL QA  H+AHVAIRN GT GGS+ALADPAAE+PAC +ALDA   L     ERRV AREFF GLY TAL P ELV A E P+  E +RS FLEL+RR+GDYAIVG+AA A+   GR+SD RLA+LG    P LA RA    EG+P  A  +AA    L  DL   ADL +   TKL LA VL  RAL
Sbjct:    1 MKAASFSYVKPAALNEVFDLLARHGDRARVLAGGQSLLASLNLRLSAPELLIDITGVPGLAGITVSGGTVRIGALTTHRQIERSPEVARHLPLLAQAVRHVAHVAIRNVGTFGGSVALADPAAEYPACAVALDAILVLAGRGAERRVRAREFFRGLYDTALQPGELVIAGEFPVSGEAYRSAFLELARRRGDYAIVGIAAHARLAAGRISDARLAFLGAASKPVLALRAAALLEGRPLDAQAIAAAQATLEDDLELPADLYSSRATKLQLARVLLGRAL 279          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A1F4CN67_9PROT (Molybdopterin dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CN67_9PROT)

HSP 1 Score: 286 bits (731), Expect = 2.290e-93
Identity = 166/279 (59.50%), Postives = 204/279 (73.12%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPP--ATDLAAE--LAGDLSPLADLENKAETKLHLANVLARRAL 822
            +KAP+F+YA+P +L   F LLERHG  AR++AGGQSL+A LNLRL+AP +L+DI  +PGL G++V+G K+ IGALT HR+IE+S EVA+H PLL QA  ++A  AIRN GT GGSIALADPAAE+PAC +ALDATF L     ERRV AREFF GLY TAL P EL+ A E P+  + +RSVFLEL+RR+GDYA+VG+AA A++ GGR+SD RLA+L     P LA RA  A EG+PP   T  AA+  L  +L   ADL     TKLHLA VL  RAL
Sbjct:    1 MKAPSFSYARPGSLSGVFELLERHGDRARVLAGGQSLLASLNLRLSAPELLVDIACVPGLTGITVAGDKVRIGALTTHRQIERSPEVARHLPLLAQAVRNVACAAIRNVGTFGGSIALADPAAEYPACAVALDATFVLAGRAAERRVRAREFFRGLYETALRPGELLIAGEFPVSGDGYRSVFLELARRRGDYAMVGIAAHARTAGGRISDARLAFLAVSGTPVLAVRAAAALEGRPPDARTVAAAQAALGDELEAPADLYASRATKLHLARVLLGRAL 279          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A537BX09_9PROT (Xanthine dehydrogenase family protein subunit M n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BX09_9PROT)

HSP 1 Score: 274 bits (701), Expect = 7.070e-89
Identity = 154/275 (56.00%), Postives = 192/275 (69.82%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPL-LPEHRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDLAAELAGDLSPLADLENKAETKLHLANVLARRAL 822
            +KAP FAYA+P ++ EA ALL++HG DAR++AGGQSLV ++N R+AAP +L+DI  +  L G+ V+   + IGAL RH E+E+SA+VAKH PL+  A PH+AH AIRN GT GGS AL DPAAE PAC LAL ATF +   KGERR+AA++FF GLYATAL P EL+ A E PL  P + S F EL+RR GDYA+VGVAA      G+ SD+R+A+ G GD P+ A    +A EG+P      A+L  DL P ADL   A  KLHLA VLA R L
Sbjct:    1 MKAPRFAYARPASIAEALALLQKHGDDARVLAGGQSLVPMMNFRVAAPKVLVDINRIGSLTGIKVTKSFVRIGALVRHVELERSADVAKHLPLVAAAMPHVAHPAIRNRGTFGGSCALGDPAAELPACTLALGATFVVAGKKGERRIAAQDFFKGLYATALKPGELLVAAEFPLPKPGYASAFGELARRHGDYAMVGVAAHGLRKVGKFSDMRVAFFGVGDRPQRASGFERALEGQPAVDGALAKLDADLEPRADLHASAAMKLHLAKVLADRVL 275          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: A0A3D1J1Z6_9BURK (Molybdopterin dehydrogenase n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A3D1J1Z6_9BURK)

HSP 1 Score: 274 bits (700), Expect = 1.140e-88
Identity = 159/277 (57.40%), Postives = 188/277 (67.87%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDL----AAELAGDLSPLADLENKAETKLHLANVLARR 816
            +KAP+F Y KP +L E F+LLE HG DARIIAGGQ+L+A LN+RL+ P +L+DI  +PGL+G+S+    + IGALTRH EIE SA VAKH PLL  AA H+AH AIRN GTLGGSIA ADPAAEWP C +ALDA   L S   ERRV A +FF  LY TA+ P E++   E PL P   R  F EL+RR GDYAIVG+AA  +   G L  VRL +LG G++P  AR A  A EGK    D        LAG+L P ADL N AE KLHLA+VL RR
Sbjct:    1 MKAPSFDYIKPASLAEVFSLLELHGDDARIIAGGQTLLATLNMRLSEPRLLVDINTVPGLSGISLQNDCVRIGALTRHSEIEDSALVAKHAPLLAMAASHVAHRAIRNRGTLGGSIAFADPAAEWPTCAVALDANIVLASRGQERRVKAGDFFEDLYTTAMAPDEIITVCEFPLQPPLMRFAFDELARRHGDYAIVGLAAGGQLVDGTLRQVRLVFLGTGNIPLRARAAEAAIEGKALNGDTFHAACTALAGELHPAADLYNSAEAKLHLASVLMRR 277          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: UPI0010A3EC16 (xanthine dehydrogenase family protein subunit M n=1 Tax=Herbaspirillum sp. ST 5-3 TaxID=2567936 RepID=UPI0010A3EC16)

HSP 1 Score: 273 bits (699), Expect = 1.620e-88
Identity = 159/279 (56.99%), Postives = 195/279 (69.89%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPEH-RSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDL--AAELA--GDLSPLADLENKAETKLHLANVLARRAL 822
            +KAPAF Y KP +L + F+LLE HG DARIIAGGQSL+A LN+RL+ P +L+DI A+PGL+G+++    + IGALTRH +IE SA +A+H PLL  AAP +AH AIRN GTLGGSIA ADPAAEWP C +ALDA+  L S  GERRV A++FF  LY TA+ P E+V A E PL P   R  F EL+RR+GDYAIVG+AA  +   G L  VRL +LG G++P  AR A  A EGK    D   AA +A   +L P ADL + AE K HLA+VL RR L
Sbjct:    1 MKAPAFDYVKPSSLAQVFSLLETHGDDARIIAGGQSLLATLNMRLSEPQLLLDINAIPGLSGITLHSDCVQIGALTRHCDIEDSALIAEHVPLLAMAAPFVAHRAIRNRGTLGGSIAFADPAAEWPTCAVALDASIVLASRSGERRVKAKDFFQDLYTTAMEPGEIVTACEFPLQPRAMRFAFDELARRRGDYAIVGLAASGQFADGLLRQVRLVFLGTGNIPLRARAAEAAIEGKSLNADTFEAARVALTTELHPAADLYHSAEAKQHLASVLMRRLL 279          
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Match: UPI001ADF0653 (xanthine dehydrogenase family protein subunit M n=1 Tax=Rhizobacter sp. AJA081-3 TaxID=2753607 RepID=UPI001ADF0653)

HSP 1 Score: 269 bits (688), Expect = 8.270e-87
Identity = 157/282 (55.67%), Postives = 193/282 (68.44%), Query Frame = 1
Query:    1 LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSILIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPHIAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAREFFTGLYATALGPAELVAAIEIPLLPE-HRSVFLELSRRKGDYAIVGVAAVAKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDLA------AELAGDLSPLADLENKAETKLHLANVLARRALA 825
            +K+PAF Y +  + Q AF LL +HG DAR+IAGGQ+L+A LN+RL+ P++L+DI       G++V GG L +GALTRH E+E S  VA+H PLL QAAPHIAH AIRN GT GG++A ADPAAEWPAC LALDAT  + SAKGERRVAA +FF GLY TA+ P +L+ A E+PL+ E  R  F ELSRR+GDYA+ G+AA AK +G  L DVRLA+L  GD P  AR A  A +G   A D A      A L  +L P  DL + A  K  LA  L RRA+A
Sbjct:    1 MKSPAFDYIRADSPQHAFELLAKHGDDARVIAGGQTLLATLNMRLSQPALLVDIAGFDAWRGIAVQGGMLRVGALTRHSEVESSPLVARHAPLLAQAAPHIAHRAIRNLGTFGGALAYADPAAEWPACVLALDATLVIASAKGERRVAAADFFQGLYTTAMHPGDLLMACEVPLIGEGERQAFSELSRRQGDYAVAGLAARAKVSGSTLRDVRLAFLSLGDRPIRARSAEAALQGG--AIDDARLAQVDAALRAELDPFDDLTHSAAAKKQLAATLMRRAVA 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1845.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8B982_9PROT6.880e-10061.57Molybdopterin dehydrogenase n=1 Tax=Betaproteobact... [more]
A0A1F4EM12_9PROT1.600e-9861.79Molybdopterin dehydrogenase n=1 Tax=Betaproteobact... [more]
A0A1F4C4M6_9PROT3.700e-9761.65Molybdopterin dehydrogenase n=1 Tax=Betaproteobact... [more]
A0A0S8C6G3_9PROT5.430e-9761.07FAD-binding PCMH-type domain-containing protein n=... [more]
A0A521V6J5_9PROT2.290e-9360.57Xanthine dehydrogenase family protein subunit M n=... [more]
A0A1F4CN67_9PROT2.290e-9359.50Molybdopterin dehydrogenase n=1 Tax=Betaproteobact... [more]
A0A537BX09_9PROT7.070e-8956.00Xanthine dehydrogenase family protein subunit M n=... [more]
A0A3D1J1Z6_9BURK1.140e-8857.40Molybdopterin dehydrogenase n=1 Tax=Oxalobacterace... [more]
UPI0010A3EC161.620e-8856.99xanthine dehydrogenase family protein subunit M n=... [more]
UPI001ADF06538.270e-8755.67xanthine dehydrogenase family protein subunit M n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1845contigP-wetherbeei_contig1845:3..827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog426355.Mrad2831_5854
PFAMsCO_deh_flav_C,FAD_binding_5
Model size825
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02800
KEGG koko:K03519
KEGG ReactionR11168
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.69e-81
EggNOG OGsCOG1319@1|root,COG1319@2|Bacteria,1MUDB@1224|Proteobacteria,2TTJF@28211|Alphaproteobacteria,1JRRF@119045|Methylobacteriaceae
EC1.2.5.3
DescriptionCO dehydrogenase flavoprotein domain protein
Cds size825
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186146.1707644-CDS-P-wetherbeei_contig1845:2..8271683186146.1707644-CDS-P-wetherbeei_contig1845:2..827Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1845 3..827 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1845.1.1prot_P-wetherbeei_contig1845.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1845 3..827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1845.1.1

>prot_P-wetherbeei_contig1845.1.1 ID=prot_P-wetherbeei_contig1845.1.1|Name=mRNA_P-wetherbeei_contig1845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
LKAPAFAYAKPRTLQEAFALLERHGSDARIIAGGQSLVAILNLRLAAPSI
LIDITALPGLAGVSVSGGKLVIGALTRHREIEQSAEVAKHCPLLTQAAPH
IAHVAIRNSGTLGGSIALADPAAEWPACCLALDATFRLVSAKGERRVAAR
EFFTGLYATALGPAELVAAIEIPLLPEHRSVFLELSRRKGDYAIVGVAAV
AKSTGGRLSDVRLAYLGGGDVPKLARRAMQAAEGKPPATDLAAELAGDLS
PLADLENKAETKLHLANVLARRALA
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mRNA from alignment at P-wetherbeei_contig1845:3..827-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1845.1.1 ID=mRNA_P-wetherbeei_contig1845.1.1|Name=mRNA_P-wetherbeei_contig1845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:3..827- (Phaeothamnion wetherbeei SAG_119_79)
TTGAAAGCACCCGCCTTCGCCTACGCGAAGCCGCGCACGCTGCAGGAAGC GTTCGCCCTGCTGGAACGACACGGCAGCGATGCCCGGATCATTGCCGGCG GCCAGAGCCTCGTCGCCATCCTCAACCTAAGGCTCGCCGCGCCCTCGATC CTCATCGACATCACCGCGCTTCCCGGCCTTGCGGGCGTTTCGGTCTCCGG CGGAAAACTCGTCATCGGCGCGCTGACCCGGCACCGGGAGATCGAGCAGT CCGCCGAAGTGGCGAAGCACTGCCCGCTGCTCACCCAGGCTGCGCCGCAC ATCGCGCACGTAGCGATTCGCAATTCGGGGACCCTGGGCGGGTCGATCGC TCTGGCCGACCCTGCGGCCGAATGGCCGGCGTGCTGCCTCGCGCTGGACG CGACCTTCAGGCTCGTGTCGGCCAAGGGCGAGCGCCGGGTCGCGGCGCGC GAGTTCTTCACCGGCCTGTACGCCACCGCACTCGGCCCCGCCGAACTGGT CGCCGCGATCGAGATCCCGCTGCTGCCGGAGCACCGCAGCGTGTTCCTCG AGCTTTCGCGCCGCAAGGGCGACTACGCCATCGTCGGCGTGGCGGCCGTT GCGAAAAGCACGGGCGGGCGCCTCTCCGACGTGCGCCTCGCCTACCTCGG CGGCGGCGACGTGCCGAAACTGGCCCGCCGCGCGATGCAGGCCGCCGAAG GCAAGCCGCCGGCCACCGATCTCGCTGCCGAACTGGCCGGCGACCTCTCG CCGCTGGCCGACCTCGAGAACAAGGCCGAAACCAAGCTCCACCTCGCCAA CGTGCTGGCCCGCCGCGCGCTTGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1845:3..827-

>mRNA_P-wetherbeei_contig1845.1.1 ID=mRNA_P-wetherbeei_contig1845.1.1|Name=mRNA_P-wetherbeei_contig1845.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:3..827- (Phaeothamnion wetherbeei SAG_119_79)
TTGAAAGCACCCGCCTTCGCCTACGCGAAGCCGCGCACGCTGCAGGAAGC
GTTCGCCCTGCTGGAACGACACGGCAGCGATGCCCGGATCATTGCCGGCG
GCCAGAGCCTCGTCGCCATCCTCAACCTAAGGCTCGCCGCGCCCTCGATC
CTCATCGACATCACCGCGCTTCCCGGCCTTGCGGGCGTTTCGGTCTCCGG
CGGAAAACTCGTCATCGGCGCGCTGACCCGGCACCGGGAGATCGAGCAGT
CCGCCGAAGTGGCGAAGCACTGCCCGCTGCTCACCCAGGCTGCGCCGCAC
ATCGCGCACGTAGCGATTCGCAATTCGGGGACCCTGGGCGGGTCGATCGC
TCTGGCCGACCCTGCGGCCGAATGGCCGGCGTGCTGCCTCGCGCTGGACG
CGACCTTCAGGCTCGTGTCGGCCAAGGGCGAGCGCCGGGTCGCGGCGCGC
GAGTTCTTCACCGGCCTGTACGCCACCGCACTCGGCCCCGCCGAACTGGT
CGCCGCGATCGAGATCCCGCTGCTGCCGGAGCACCGCAGCGTGTTCCTCG
AGCTTTCGCGCCGCAAGGGCGACTACGCCATCGTCGGCGTGGCGGCCGTT
GCGAAAAGCACGGGCGGGCGCCTCTCCGACGTGCGCCTCGCCTACCTCGG
CGGCGGCGACGTGCCGAAACTGGCCCGCCGCGCGATGCAGGCCGCCGAAG
GCAAGCCGCCGGCCACCGATCTCGCTGCCGAACTGGCCGGCGACCTCTCG
CCGCTGGCCGACCTCGAGAACAAGGCCGAAACCAAGCTCCACCTCGCCAA
CGTGCTGGCCCGCCGCGCGCTTGCC
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