prot_P-wetherbeei_contig1844.2.7 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1844.2.7
Unique Nameprot_P-wetherbeei_contig1844.2.7
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length271
Homology
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A5Q2RN89_9ACTN (HNH endonuclease n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RN89_9ACTN)

HSP 1 Score: 107 bits (268), Expect = 2.690e-25
Identity = 59/151 (39.07%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R LVLN +F  L +V A RA+ L+ A KAD++   G ++RS    + VPSVI LR YV V  P    L + A                                   +F+RD   CQYCGSAA+S+DH++PRS+GG H W N+VA C +CN
Sbjct:    3 RALVLNASFEPLGVVAARRAVVLVLADKADLLHGSGAVVRSERMSLPVPSVIRLRHYVHVPYPRHTALTRRA-----------------------------------VFHRDAHLCQYCGSAAESIDHVVPRSRGGAHVWENVVAACRRCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7V9C5Q1_9ACTN (HNH endonuclease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9C5Q1_9ACTN)

HSP 1 Score: 107 bits (267), Expect = 3.120e-25
Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R LVLN T+  L++V A RA+ L+  ++A+VVE+ G I  S    V  PSVI LRRYVKV+      L + A                                   +F RD+ +CQYCG  A+++DH++PR+QGGGH W N+VA C +CN
Sbjct:    3 RALVLNATYEPLSVVSARRAVVLVVRERAEVVESNGHIYHSEHLAVSAPSVIKLRRYVKVRFDRRTPLNRRA-----------------------------------VFLRDDHSCQYCGQPAENLDHVVPRAQGGGHTWDNVVAACRRCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A6G0A5Y7_9ACTN (HNH endonuclease n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A5Y7_9ACTN)

HSP 1 Score: 104 bits (259), Expect = 5.540e-24
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 0
Query:   12 LVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            LVLN +   L++V   RAL L+ A KADV+   GE++RS    + +PSV+ LR YV+V  + GA   R+T                                    +F RD  TCQYCGS A+S+DH++PRS+GG H W N+VA C +CN
Sbjct:    5 LVLNASQEPLSVVPTRRALLLVLADKADVLHHNGEVVRSERLTIHMPSVVRLRYYVRVPFRRGAALNRRT------------------------------------VFLRDRHTCQYCGSTAESIDHVVPRSRGGSHSWDNVVAACRRCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7W0P4Z8_9ACTN (HNH endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0P4Z8_9ACTN)

HSP 1 Score: 103 bits (257), Expect = 9.060e-24
Identity = 60/152 (39.47%), Postives = 80/152 (52.63%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R LVLN +   L +V A RA+ ++  +KADVV + G +  S    +E PSV+ LRRYV V  +P AP  R+                                     +F RD STCQYCG+AA+++DH+IPRS+GG H W N+VA C KCN
Sbjct:    3 RALVLNASESPLAVVAARRAVVMVLKEKADVVISNGLVFHSAHLTIEAPSVVRLRRYVHVPYRPHAPLTRRA------------------------------------VFARDLSTCQYCGAAAENLDHVIPRSRGGLHSWENVVASCRKCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A4U6QPQ6_9ACTN (HNH endonuclease n=2 Tax=Nakamurella flava TaxID=2576308 RepID=A0A4U6QPQ6_9ACTN)

HSP 1 Score: 103 bits (257), Expect = 1.280e-23
Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = 0
Query:    9 LRVLVLNVTFVALNIVKAPRALQLLSAQKAD-VVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            +R L+LN +   L++V   RA+ L+ A KA+ V+E +G ++ SPSA++ VP+V+ LRRYV+V     P + +                                     +  RD   C YCG   ++VDHI+PRS+GGGH W N VACCL+CN
Sbjct:    9 VRALLLNASHEPLSVVPGRRAVVLVVAGKAECVLERDGPVLHSPSAQMAVPAVVRLRRYVRVPFQPPPAVTRAG-----------------------------------VLRRDGRRCAYCGGRGETVDHIVPRSRGGGHSWENCVACCLRCN 126          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A381RY46_9ZZZZ (HNHc domain-containing protein (Fragment) n=4 Tax=root TaxID=1 RepID=A0A381RY46_9ZZZZ)

HSP 1 Score: 103 bits (256), Expect = 1.570e-23
Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 0
Query:   12 LVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            L+LN T+  L+IV   RA+ L+  ++A++V   G ++RS   E++ PSV+ L RYV V                                   P H R   S   + +RD   CQYCGS A+SVDH++PRS+GG H W N+VA C +CN
Sbjct:    5 LILNATYEPLSIVSTRRAVVLVLGERAEMVHATGRVVRSELLEIDEPSVVRLSRYVHV-----------------------------------PRHRRRGFSRRAVLHRDEHRCQYCGSQAESVDHVVPRSRGGAHDWENVVAACRRCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A6N8ZYT5_9ACTN (HNH endonuclease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N8ZYT5_9ACTN)

HSP 1 Score: 102 bits (255), Expect = 2.150e-23
Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R L+LN T+  L+IV A RA+ L+   KA  V +  ++ +S   E  VPSV+ LR YVKV                                   P H R+  +   +F RD+  CQYC S A+S+DH++P+S+GGGH W N+VACC +CN
Sbjct:    4 RALILNATYEPLSIVSARRAMVLVLRSKAVTVASSHDVWKSIDQEFAVPSVVRLRNYVKV-----------------------------------PYHRRVPLTRTAVFARDHHRCQYCRSPAESLDHVVPKSRGGGHTWENVVACCRRCN 119          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A7W1KTQ2_9ACTN (HNH endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1KTQ2_9ACTN)

HSP 1 Score: 102 bits (254), Expect = 2.440e-23
Identity = 59/152 (38.82%), Postives = 80/152 (52.63%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVK-KPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R LVLNVT + L +V A RA+ L+  +KA+VV + G I  S    +E PSV+ LRRYV+V  +P AP  R+                                     +F RD   CQYCGS A+++DH++PRS+GG H W N+VA C +CN
Sbjct:    3 RALVLNVTDLPLAVVPARRAVVLVLKEKAEVVMSNGMIFHSERLVLEAPSVVRLRRYVRVPYRPHAPLTRRA------------------------------------VFARDEWACQYCGSTAENLDHVVPRSRGGLHVWENVVAACRRCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A2D6L2Y7_9ACTN (HNH endonuclease n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6L2Y7_9ACTN)

HSP 1 Score: 101 bits (252), Expect = 5.480e-23
Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = 0
Query:   11 VLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            VLVLN +F  L++V A RA  L+ A KA+++E+  E++RSPS  + VP V+ LR  VK                                    P   R + S   +F RD+  CQYCG+ A S+DHI+PRS+GG H W N+VA C  CN
Sbjct:    4 VLVLNASFEPLSVVSARRATCLVLADKAEIIESGEELVRSPSFAMNVPLVVRLRYMVKA-----------------------------------PRQRRAVLSRRAVFARDDYQCQYCGAHADSIDHIVPRSRGGHHSWENLVAACKPCN 118          
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Match: A0A538DPU2_9ACTN (HNH endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DPU2_9ACTN)

HSP 1 Score: 101 bits (252), Expect = 6.080e-23
Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0
Query:   10 RVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRSPSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPDCFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWHNMVACCLKCN 160
            R LVLN T+  + +V  PRAL L+ + KA+ + + G +IRS    +E PSV+ L R+V+V       L + A                                   +F RD   CQYCG+AA+S+DH++PRS+GG H W N+VA C +CN
Sbjct:    3 RTLVLNATYEPICVVPCPRALVLVISAKAETIASTGRLIRSERLSLEEPSVVRLARFVRVPYQRRRALNRRA-----------------------------------VFIRDGHQCQYCGAAAESIDHVVPRSRGGKHEWDNVVAACRRCN 118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1844.2.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5Q2RN89_9ACTN2.690e-2539.07HNH endonuclease n=1 Tax=Actinomarinicola tropica ... [more]
A0A7V9C5Q1_9ACTN3.120e-2538.41HNH endonuclease n=1 Tax=Acidimicrobiia bacterium ... [more]
A0A6G0A5Y7_9ACTN5.540e-2438.67HNH endonuclease n=2 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A7W0P4Z8_9ACTN9.060e-2439.47HNH endonuclease n=1 Tax=Actinomycetia bacterium T... [more]
A0A4U6QPQ6_9ACTN1.280e-2335.95HNH endonuclease n=2 Tax=Nakamurella flava TaxID=2... [more]
A0A381RY46_9ZZZZ1.570e-2336.24HNHc domain-containing protein (Fragment) n=4 Tax=... [more]
A0A6N8ZYT5_9ACTN2.150e-2337.09HNH endonuclease n=1 Tax=Acidimicrobiia bacterium ... [more]
A0A7W1KTQ2_9ACTN2.440e-2338.82HNH endonuclease n=1 Tax=Actinomycetia bacterium T... [more]
A0A2D6L2Y7_9ACTN5.480e-2338.00HNH endonuclease n=4 Tax=Actinobacteria TaxID=2011... [more]
A0A538DPU2_9ACTN6.080e-2335.76HNH endonuclease n=1 Tax=Actinomycetia bacterium T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 112..161
e-value: 1.0E-10
score: 51.6
IPR003615HNH nucleaseCDDcd00085HNHccoord: 115..160
e-value: 1.98286E-10
score: 53.2443
NoneNo IPR availableGENE3D1.10.30.50coord: 107..163
e-value: 3.9E-13
score: 50.9
NoneNo IPR availablePANTHERPTHR33877:SF2SLL1193 PROTEINcoord: 116..161
coord: 7..72
NoneNo IPR availablePANTHERPTHR33877SLL1193 PROTEINcoord: 116..161
coord: 7..72
IPR029471HNH endonuclease 5PFAMPF14279HNH_5coord: 125..161
e-value: 2.2E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1844contigP-wetherbeei_contig1844:1927..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1844.2.7mRNA_P-wetherbeei_contig1844.2.7Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1844 1546..4038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1844.2.7 ID=prot_P-wetherbeei_contig1844.2.7|Name=mRNA_P-wetherbeei_contig1844.2.7|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MRNPSQQHLRVLVLNVTFVALNIVKAPRALQLLSAQKADVVETEGEIIRS
PSAEVEVPSVIALRRYVKVKKPGAPTLRKTATRTERCINLFDSEESVPPD
CFVFPGHNRLLHSLLKIFNRDNSTCQYCGSAAQSVDHIIPRSQGGGHHWH
NMVACCLKCNQVCWIPYYARHRLGSIYVLLRRGSPYAALLFLSHLRYVGL
PFSCTSACCPRIHPTPNQAKGARSPEQAGMRLRSKPVAPPGAALGLRLPR
GGQLPYSRWGAYLSGGGAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR029471HNH_5