mRNA_P-wetherbeei_contig18433.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 181 bits (458), Expect = 6.930e-54 Identity = 80/149 (53.69%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTCHNQLHMPGLLC 447
+VYAGVPTAC+ TNP+ GRV+K+P +W+D K+V HTL GLDC+P YMQGAFY+L+ LV+ L G +H FTNEDVT+GSWL+GVDRE+V ++++ + LWDC+CA+ ++ RR +FFHNCK QL+ C +L PG+ C
Sbjct: 153 KVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLCGTRLLRPGVGC 301
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 183 bits (464), Expect = 8.650e-52 Identity = 80/149 (53.69%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTCHNQLHMPGLLC 447
+VY GVPTAC+ TNP+ GRV+K+P +W+D K+V HTL GLDC+P YMQGAFY+L+ LV+ L G +H FTNEDVT+GSWL+GVDRE+V ++++R + LWDC+CA+ ++ R+ H+FFHNCK QL+ C +L PG+ C
Sbjct: 489 KVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLCGTRLLRPGVGC 637
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.470e-50 Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTC 414
+VYAG+PTAC L +NP+ IGRVIKDP KW+D KFV+HTL GLDCYP Y QGAFY+LS LV++L G +TFTNEDVT+GSWL+GVDRE++ + + A+LW+C CA+ Y + FFHNCK QLQ C
Sbjct: 81 KVYAGIPTACGLESNPH--IGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTN-AFFHNCKSLDQLQKC 215
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 174 bits (440), Expect = 5.690e-50 Identity = 77/138 (55.80%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTC 414
+VY G+PTAC LP NPN+ +G+VI D DKWYD K++NHT+ GLDCYPVYMQGAFY+LSY LV+FL G +TF NEDVT+G WL GVDR + P++D+R A++W+C C + + VFFHNCK L+ C
Sbjct: 271 KVYGGIPTACHLPNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRPNFNPGGDAN-VFFHNCKSMDDLRGC 407
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.980e-48 Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTC 414
R+YAGVPTAC + N N +GRVI D T++WYD KFV HT+ GL CYPVYMQGAFYVL+ LV+FL G H+VTF NEDVTVGSWLLGVDR++V I D+ A+LW C C+ +P R+ VFFH+CK +L+ C
Sbjct: 429 RLYAGVPTACGVHRNNPN-VGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCSLDTMPQWARKSSVFFHDCKALEKLRRC 565
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 167 bits (424), Expect = 7.320e-48 Identity = 76/143 (53.15%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVP--AAYRRDH---VFFHNCKEDWQLQTC 414
+VYAGVPT C++P + ++GRV DPT KWYDE++V HT+ ++CYP Y QGA Y+LS LV+FL G DH +TF NEDVT+G+WL+GVDR VV + D+ A+LW+C CA R AA+ ++H FFHNCK+ WQ+ C
Sbjct: 239 KVYAGVPTHCNMPGH--QMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKC 379
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 168 bits (425), Expect = 2.670e-47 Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRV 345
++YAGVPTAC+ P NP+ +GRVIKD DKWYD+KFV+HTL GLDCYPVYMQGAFYVL+ LV+ L G +HY TF NEDVTVGSWLLGVDR + IHD ++LW+CVC V
Sbjct: 312 KIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFV 426
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 6.000e-47 Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYMQGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRRDHVFFHNCKEDWQLQTC 414
+VY G+PTAC LP NP++ +G+VI D +KWYD K++NHT+ GLDCYPVYMQGAFY+LSY LV+FL G +TF NEDVT+G WL GVDR + P++D+R A++W+C C + + VFFH CK L+ C
Sbjct: 311 KVYGGIPTACHLPNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRPNFNPGGDAN-VFFHGCKGMDDLRGC 447
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.350e-32 Identity = 76/192 (39.58%), Postives = 93/192 (48.44%), Query Frame = 1
Query: 1 RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYM----------------------------------------------------QGAFYVLSYELVKFLEGGIDHYVTFTNEDVTVGSWLLGVDREVVPIHDVRRAKLWDCVCAQKRVPAAYRR--DHVFFHNCKEDWQLQTC 414
RVYAGVPTAC L + ++ GR+I+DPT KW+D KFV HTL GLDCYP Y QGAFY+LS LV L G V F NEDVTVG+W++ ++RE+V + + A LWDC CA P + R +VF HNCK QLQ C
Sbjct: 155 RVYAGVPTACGLEAHSDS--GRIIRDPTHKWHDAKFVAHTLGGLDCYPAYXXXXXXXXXXXXXXXXXXXXXRQRGLRGGACGQSLLELKLAVHNSLDKYPAYHQGAFYLLSQPLVAHLHRGRAQLVAFANEDVTVGAWMMALNREMVALGSLSAAHLWDCTCA---TPTKWLRYDPNVFHHNCKALAQLQAC 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18433.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18433.1.1 >prot_P-wetherbeei_contig18433.1.1 ID=prot_P-wetherbeei_contig18433.1.1|Name=mRNA_P-wetherbeei_contig18433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp RVYAGVPTACDLPTNPNNLIGRVIKDPTDKWYDEKFVNHTLRGLDCYPVYback to top mRNA from alignment at P-wetherbeei_contig18433:288..1351- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18433.1.1 ID=mRNA_P-wetherbeei_contig18433.1.1|Name=mRNA_P-wetherbeei_contig18433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1064bp|location=Sequence derived from alignment at P-wetherbeei_contig18433:288..1351- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18433:288..1351- >mRNA_P-wetherbeei_contig18433.1.1 ID=mRNA_P-wetherbeei_contig18433.1.1|Name=mRNA_P-wetherbeei_contig18433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig18433:288..1351- (Phaeothamnion wetherbeei SAG_119_79)back to top |