mRNA_P-wetherbeei_contig18428.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18428.1.1
Unique NamemRNA_P-wetherbeei_contig18428.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S2UB93_9STRA (alpha-1,2-Mannosidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB93_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.600e-13
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DEVLPISG+  NNWGGMG TLVDSLDTLWLMGLK+
Sbjct:  269 GQDEVLPISGRGHNNWGGMGTTLVDSLDTLWLMGLKE 305
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A6U4HU98_9STRA (alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HU98_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.890e-13
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DE+LP+SG+++NNWGGMGVTLVDSLDTLWLM +KD
Sbjct:  624 GYDELLPVSGRKQNNWGGMGVTLVDSLDTLWLMDMKD 660
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S3MDI2_9STRA (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDI2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.280e-12
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DEV P+S + ++NWGGMGVTLVDSLDTLWLMG+KD
Sbjct:   54 GRDEVKPLSNRGQDNWGGMGVTLVDSLDTLWLMGMKD 90
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S4N8K7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8K7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.990e-12
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DEVLP SGK  +NWGGMG TLVDSLDTLWLMG+K+
Sbjct:   87 GQDEVLPQSGKSHSNWGGMGTTLVDSLDTLWLMGMKE 123
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.120e-11
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DE+ P SG+ +NNWGGMG+TL+DSLDTLWLMG+KD
Sbjct:  101 GADELKPRSGRSQNNWGGMGMTLIDSLDTLWLMGMKD 137
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S2EYT1_TRICV (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYT1_TRICV)

HSP 1 Score: 65.9 bits (159), Expect = 1.520e-11
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            GMDE+LP + +  NNWGGMG TLVDSLDTLWLMG+KD
Sbjct:  303 GMDELLPQTKRSHNNWGGMGTTLVDSLDTLWLMGMKD 339
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S3K687_9STRA (alpha-1,2-Mannosidase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K687_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.880e-11
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DE+ PISG+  +NWGGM VT+VDSLDTLWLMGLKD
Sbjct:  396 GRDELKPISGRGHDNWGGMAVTMVDSLDTLWLMGLKD 432
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S2V7D5_9STRA (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7D5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.310e-11
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            G DEVLP SG+   NWGG G+TLVDSLDTLWLM +K+
Sbjct:   23 GQDEVLPQSGEGSQNWGGQGITLVDSLDTLWLMDMKE 59
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BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: F0Y5N1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N1_AURAN)

HSP 1 Score: 63.9 bits (154), Expect = 7.230e-11
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLK 108
            G DE+ P+SG+  +NWGGMGVTLVDSLDTLWLMGL+
Sbjct:  369 GRDELKPVSGRGHDNWGGMGVTLVDSLDTLWLMGLR 404
[Close]
BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Match: A0A7S1YWG9_TRICV (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWG9_TRICV)

HSP 1 Score: 63.2 bits (152), Expect = 1.050e-10
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 1 
Query:    1 GMDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD 111
            GMDEV P+SG   N WG MG+TLVDSLDTLW+MG++D
Sbjct:  171 GMDEVKPVSGGGNNRWGRMGITLVDSLDTLWIMGMRD 207
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18428.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UB93_9STRA3.600e-1383.78alpha-1,2-Mannosidase n=1 Tax=Attheya septentriona... [more]
A0A6U4HU98_9STRA4.890e-1378.38alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva Tax... [more]
A0A7S3MDI2_9STRA1.280e-1275.68alpha-1,2-Mannosidase (Fragment) n=1 Tax=Spumella ... [more]
A0A7S4N8K7_9STRA5.990e-1278.38alpha-1,2-Mannosidase n=1 Tax=Odontella aurita Tax... [more]
A0A7S1GA01_9STRA1.120e-1172.97alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2... [more]
A0A7S2EYT1_TRICV1.520e-1175.68alpha-1,2-Mannosidase (Fragment) n=1 Tax=Trieres c... [more]
A0A7S3K687_9STRA3.880e-1175.68alpha-1,2-Mannosidase n=1 Tax=Aureoumbra lagunensi... [more]
A0A7S2V7D5_9STRA4.310e-1170.27alpha-1,2-Mannosidase (Fragment) n=1 Tax=Amphipror... [more]
F0Y5N1_AURAN7.230e-1175.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1YWG9_TRICV1.050e-1070.27alpha-1,2-Mannosidase (Fragment) n=1 Tax=Trieres c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18428contigP-wetherbeei_contig18428:1097..1207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44056.XP_009035587.1
Preferred nameMAN1A2
PFAMsGlyco_hydro_47,KH_2,MMR_HSR1
Model size111
Max annot lvl2759|Eukaryota
KEGG koko:K01230,ko:K03595
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00073,M00074
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005793,GO:0005794,GO:0005802,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006511,GO:0006517,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0007568,GO:0007585,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009295,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016020,GO:0016021,GO:0016070,GO:0016072,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0022613,GO:0030163,GO:0030173,GO:0030323,GO:0030324,GO:0030433,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0034976,GO:0035010,GO:0035295,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0042254,GO:0042493,GO:0042644,GO:0042646,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043413,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0048286,GO:0048513,GO:0048731,GO:0048856,GO:0050896,GO:0051603,GO:0051716,GO:0060541,GO:0070085,GO:0071704,GO:0071840,GO:0072347,GO:0090304,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904381
Exons1
Evalue2.89e-11
EggNOG OGsCOG1159@1|root,KOG2204@1|root,KOG1423@2759|Eukaryota,KOG2204@2759|Eukaryota
EC3.2.1.113
Descriptionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
Cds size108
COG categoryG
CAZyGH47
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03029,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186145.5874767-UTR-P-wetherbeei_contig18428:1096..10991683186145.5874767-UTR-P-wetherbeei_contig18428:1096..1099Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18428 1097..1099 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186145.602466-CDS-P-wetherbeei_contig18428:1099..12071683186145.602466-CDS-P-wetherbeei_contig18428:1099..1207Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18428 1100..1207 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18428.1.1prot_P-wetherbeei_contig18428.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18428 1100..1207 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18428.1.1

>prot_P-wetherbeei_contig18428.1.1 ID=prot_P-wetherbeei_contig18428.1.1|Name=mRNA_P-wetherbeei_contig18428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=36bp
MDEVLPISGKQKNNWGGMGVTLVDSLDTLWLMGLKD
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mRNA from alignment at P-wetherbeei_contig18428:1097..1207+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18428.1.1 ID=mRNA_P-wetherbeei_contig18428.1.1|Name=mRNA_P-wetherbeei_contig18428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=111bp|location=Sequence derived from alignment at P-wetherbeei_contig18428:1097..1207+ (Phaeothamnion wetherbeei SAG_119_79)
GGCATGGATGAGGTGCTGCCGATATCTGGGAAACAGAAGAACAATTGGGG
TGGCATGGGCGTCACACTCGTGGACTCCCTCGACACTCTCTGGCTCATGG
GCCTGAAAGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18428:1097..1207+

>mRNA_P-wetherbeei_contig18428.1.1 ID=mRNA_P-wetherbeei_contig18428.1.1|Name=mRNA_P-wetherbeei_contig18428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=108bp|location=Sequence derived from alignment at P-wetherbeei_contig18428:1097..1207+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGAGGTGCTGCCGATATCTGGGAAACAGAAGAACAATTGGGGTGG
CATGGGCGTCACACTCGTGGACTCCCTCGACACTCTCTGGCTCATGGGCC
TGAAAGAT
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